RNA–Protein interactions for RNA: ENST00000580012.1

NDEL1-207, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 3

Gene NDEL1, Length 790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-207ENST00000580012 PNPLA7Q6ZV29 1317 aa29.54■■■□□ 2.32
NDEL1-207ENST00000580012 TSR2Q969E8 191 aaKnown RBP29.54■■■□□ 2.32
NDEL1-207ENST00000580012 TJP1Q07157 1748 aa29.54■■■□□ 2.32
NDEL1-207ENST00000580012 GNPATO15228 680 aa29.53■■■□□ 2.32
NDEL1-207ENST00000580012 GOLGA2Q08379 1002 aa29.53■■■□□ 2.32
NDEL1-207ENST00000580012 C4BP0C0L5 1744 aa29.53■■■□□ 2.32
NDEL1-207ENST00000580012 A1BGP04217 495 aa29.52■■■□□ 2.32
NDEL1-207ENST00000580012 HOXB7P09629 217 aa29.52■■■□□ 2.32
NDEL1-207ENST00000580012 SSFA2P28290 1259 aa29.52■■■□□ 2.32
NDEL1-207ENST00000580012 FLAD1Q8NFF5 587 aa29.52■■■□□ 2.32
NDEL1-207ENST00000580012 RTCBQ9Y3I0 505 aaKnown RBP29.52■■■□□ 2.32
NDEL1-207ENST00000580012 TAF1LQ8IZX4 1826 aa29.52■■■□□ 2.32
NDEL1-207ENST00000580012 HNRNPUQ00839 825 aaKnown RBP eCLIP29.51■■■□□ 2.31
NDEL1-207ENST00000580012 COL23A1Q86Y22 540 aaPredicted RBP29.51■■■□□ 2.31
NDEL1-207ENST00000580012 C8orf58Q8NAV2 365 aa29.51■■■□□ 2.31
NDEL1-207ENST00000580012 ZBTB1Q9Y2K1 713 aa29.51■■■□□ 2.31
NDEL1-207ENST00000580012 FANCIQ9NVI1 1328 aa29.5■■■□□ 2.31
NDEL1-207ENST00000580012 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.5■■■□□ 2.31
NDEL1-207ENST00000580012 ADRA2BP18089 450 aa29.5■■■□□ 2.31
NDEL1-207ENST00000580012 SLFN5Q08AF3 891 aa29.5■■■□□ 2.31
NDEL1-207ENST00000580012 DUSP27Q5VZP5 1158 aa29.5■■■□□ 2.31
NDEL1-207ENST00000580012 SMIM5Q71RC9 77 aa29.5■■■□□ 2.31
NDEL1-207ENST00000580012 PDGFDQ9GZP0 370 aaPredicted RBP29.5■■■□□ 2.31
NDEL1-207ENST00000580012 MYH16Q9H6N6 1097 aa29.5■■■□□ 2.31
NDEL1-207ENST00000580012 SOS1Q07889 1333 aaPredicted RBP29.49■■■□□ 2.31
NDEL1-207ENST00000580012 EIF5P55010 431 aaKnown RBP29.49■■■□□ 2.31
NDEL1-207ENST00000580012 TRMT2AQ8IZ69 625 aaKnown RBP29.49■■■□□ 2.31
NDEL1-207ENST00000580012 COL5A3P25940 1745 aaPredicted RBP29.48■■■□□ 2.31
NDEL1-207ENST00000580012 NBPF26B4DH59 902 aa29.48■■■□□ 2.31
NDEL1-207ENST00000580012 E9PSI1 815 aa29.48■■■□□ 2.31
NDEL1-207ENST00000580012 NBPF10Q6P3W6 841 aaKnown RBP29.48■■■□□ 2.31
NDEL1-207ENST00000580012 NBPF15Q8N660 670 aa29.48■■■□□ 2.31
NDEL1-207ENST00000580012 TRAPPC3LQ5T215 181 aa29.47■■■□□ 2.31
NDEL1-207ENST00000580012 CANXP27824 592 aaKnown RBP29.46■■■□□ 2.31
NDEL1-207ENST00000580012 IL6STP40189 918 aaPredicted RBP29.46■■■□□ 2.31
NDEL1-207ENST00000580012 TSPYL6Q8N831 410 aa29.46■■■□□ 2.31
NDEL1-207ENST00000580012 ARHGEF1Q92888 912 aaKnown RBP29.46■■■□□ 2.31
NDEL1-207ENST00000580012 CDCA7LQ96GN5 454 aa29.46■■■□□ 2.31
NDEL1-207ENST00000580012 ERBB4Q15303 1308 aa29.45■■■□□ 2.3
NDEL1-207ENST00000580012 MYH14Q7Z406 1995 aaKnown RBP29.44■■■□□ 2.3
NDEL1-207ENST00000580012 SLC16A10Q8TF71 515 aa29.44■■■□□ 2.3
NDEL1-207ENST00000580012 PHF14O94880 888 aa29.43■■■□□ 2.3
NDEL1-207ENST00000580012 EIF2S2P20042 333 aaKnown RBP29.43■■■□□ 2.3
NDEL1-207ENST00000580012 PDIA6Q15084 440 aa29.43■■■□□ 2.3
NDEL1-207ENST00000580012 ELL2O00472 640 aaPredicted RBP29.42■■■□□ 2.3
NDEL1-207ENST00000580012 EXOSC9Q06265 439 aaKnown RBP29.42■■■□□ 2.3
NDEL1-207ENST00000580012 LRP10Q7Z4F1 713 aa29.41■■■□□ 2.3
NDEL1-207ENST00000580012 ZBED9Q6R2W3 1325 aa29.41■■■□□ 2.3
NDEL1-207ENST00000580012 PIP4K2AP48426 406 aaPredicted RBP29.4■■■□□ 2.3
NDEL1-207ENST00000580012 VAMP4O75379 141 aa29.39■■■□□ 2.3
NDEL1-207ENST00000580012 TWISTNBQ3B726 338 aaPredicted RBP29.39■■■□□ 2.3
NDEL1-207ENST00000580012 HDGFL1Q5TGJ6 251 aa29.39■■■□□ 2.3
NDEL1-207ENST00000580012 A0A087WZG4 1122 aa29.38■■■□□ 2.29
NDEL1-207ENST00000580012 RFC4P35249 363 aa29.38■■■□□ 2.29
NDEL1-207ENST00000580012 CHMP4AQ9BY43 222 aa29.38■■■□□ 2.29
NDEL1-207ENST00000580012 UBR3Q6ZT12 1888 aa29.38■■■□□ 2.29
NDEL1-207ENST00000580012 DDX21Q9NR30 783 aaKnown RBP eCLIP29.37■■■□□ 2.29
NDEL1-207ENST00000580012 COL15A1P39059 1388 aa29.37■■■□□ 2.29
NDEL1-207ENST00000580012 QSER1Q2KHR3 1735 aa29.37■■■□□ 2.29
NDEL1-207ENST00000580012 MSH5O43196 834 aa29.36■■■□□ 2.29
NDEL1-207ENST00000580012 PROSER3Q2NL68 480 aa29.36■■■□□ 2.29
NDEL1-207ENST00000580012 NECTIN2Q92692 538 aa29.36■■■□□ 2.29
NDEL1-207ENST00000580012 MTFR1LQ9H019 292 aa29.36■■■□□ 2.29
NDEL1-207ENST00000580012 NARFQ9UHQ1 456 aa29.36■■■□□ 2.29
NDEL1-207ENST00000580012 USP42Q9H9J4 1324 aaKnown RBP29.35■■■□□ 2.29
NDEL1-207ENST00000580012 ZBTB7AO95365 584 aa29.34■■■□□ 2.29
NDEL1-207ENST00000580012 DBF4Q9UBU7 674 aaPredicted RBP29.34■■■□□ 2.29
NDEL1-207ENST00000580012 CASZ1Q86V15 1759 aa29.34■■■□□ 2.29
NDEL1-207ENST00000580012 GYS1P13807 737 aa29.33■■■□□ 2.29
NDEL1-207ENST00000580012 CCDC30Q5VVM6 783 aa29.33■■■□□ 2.29
NDEL1-207ENST00000580012 CHPF2Q9P2E5 772 aa29.33■■■□□ 2.29
NDEL1-207ENST00000580012 SRP68Q9UHB9 627 aaKnown RBP29.33■■■□□ 2.29
NDEL1-207ENST00000580012 TUBGCP6Q96RT7 1819 aa29.32■■■□□ 2.28
NDEL1-207ENST00000580012 MYL6BP14649 208 aa29.32■■■□□ 2.28
NDEL1-207ENST00000580012 TBC1D2BQ9UPU7 963 aa29.32■■■□□ 2.28
NDEL1-207ENST00000580012 ANXA1P04083 346 aa29.31■■■□□ 2.28
NDEL1-207ENST00000580012 SGIP1Q9BQI5 828 aa29.31■■■□□ 2.28
NDEL1-207ENST00000580012 BCL2L12Q9HB09 334 aa29.31■■■□□ 2.28
NDEL1-207ENST00000580012 RGL2O15211 777 aa29.3■■■□□ 2.28
NDEL1-207ENST00000580012 ZPR1O75312 459 aa29.3■■■□□ 2.28
NDEL1-207ENST00000580012 CAMTA2O94983 1202 aa29.3■■■□□ 2.28
NDEL1-207ENST00000580012 USPL1Q5W0Q7 1092 aa29.3■■■□□ 2.28
NDEL1-207ENST00000580012 NPM2Q86SE8 214 aaKnown RBP29.3■■■□□ 2.28
NDEL1-207ENST00000580012 DZIP3Q86Y13 1208 aaKnown RBP29.3■■■□□ 2.28
NDEL1-207ENST00000580012 NLGN1Q8N2Q7 840 aa29.3■■■□□ 2.28
NDEL1-207ENST00000580012 ZNF330Q9Y3S2 320 aaPredicted RBP29.3■■■□□ 2.28
NDEL1-207ENST00000580012 LAMB4A4D0S4 1761 aa29.3■■■□□ 2.28
NDEL1-207ENST00000580012 SPON1Q9HCB6 807 aa29.29■■■□□ 2.28
NDEL1-207ENST00000580012 HYPKQ9NX55 129 aa29.29■■■□□ 2.28
NDEL1-207ENST00000580012 ATF5Q9Y2D1 282 aaPredicted RBP29.29■■■□□ 2.28
NDEL1-207ENST00000580012 PTGER2P43116 358 aa29.28■■■□□ 2.28
NDEL1-207ENST00000580012 FKBP8Q14318 412 aa29.27■■■□□ 2.28
NDEL1-207ENST00000580012 TTLL7Q6ZT98 887 aa29.27■■■□□ 2.28
NDEL1-207ENST00000580012 ERVV-1B6SEH8 477 aa29.26■■■□□ 2.27
NDEL1-207ENST00000580012 COPS6Q7L5N1 327 aa29.26■■■□□ 2.27
NDEL1-207ENST00000580012 CT47B1P0C2W7 299 aaPredicted RBP29.25■■■□□ 2.27
NDEL1-207ENST00000580012 CLEC4GQ6UXB4 293 aa29.25■■■□□ 2.27
NDEL1-207ENST00000580012 XAGE3Q8WTP9 111 aa29.25■■■□□ 2.27
NDEL1-207ENST00000580012 TM4SF1P30408 202 aa29.24■■■□□ 2.27
NDEL1-207ENST00000580012 MSL1Q68DK7 614 aa29.24■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms