RNA–Protein interactions for RNA: ENST00000579630.1

TRIM16-217, Transcript of tripartite motif containing 16, humanhuman

TSL 4

Gene TRIM16, Length 550 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM16-217ENST00000579630 PRAMEF22A3QJZ6 481 aa13.35□□□□□ -0.27
TRIM16-217ENST00000579630 ANP32CO43423 234 aa13.35□□□□□ -0.27
TRIM16-217ENST00000579630 SNRPA1P09661 255 aaKnown RBP13.35□□□□□ -0.27
TRIM16-217ENST00000579630 RRP7AQ9Y3A4 280 aaKnown RBP13.35□□□□□ -0.27
TRIM16-217ENST00000579630 CICQ96RK0 1608 aaPredicted RBP13.35□□□□□ -0.27
TRIM16-217ENST00000579630 SIPA1L3O60292 1781 aaPredicted RBP13.35□□□□□ -0.27
TRIM16-217ENST00000579630 COL5A3P25940 1745 aaPredicted RBP13.34□□□□□ -0.27
TRIM16-217ENST00000579630 TJP1Q07157 1748 aa13.34□□□□□ -0.27
TRIM16-217ENST00000579630 A1BGP04217 495 aa13.34□□□□□ -0.27
TRIM16-217ENST00000579630 CANXP27824 592 aaKnown RBP13.34□□□□□ -0.27
TRIM16-217ENST00000579630 EIF4A1P60842 406 aaKnown RBP13.34□□□□□ -0.27
TRIM16-217ENST00000579630 SRP68Q9UHB9 627 aaKnown RBP13.34□□□□□ -0.27
TRIM16-217ENST00000579630 USP42Q9H9J4 1324 aaKnown RBP13.34□□□□□ -0.27
TRIM16-217ENST00000579630 TM4SF1P30408 202 aa13.33□□□□□ -0.28
TRIM16-217ENST00000579630 NEUROD2Q15784 382 aa13.33□□□□□ -0.28
TRIM16-217ENST00000579630 BCL2L12Q9HB09 334 aa13.33□□□□□ -0.28
TRIM16-217ENST00000579630 BABAM1Q9NWV8 329 aa13.33□□□□□ -0.28
TRIM16-217ENST00000579630 NARFQ9UHQ1 456 aa13.33□□□□□ -0.28
TRIM16-217ENST00000579630 UBR2Q8IWV8 1755 aa13.32□□□□□ -0.28
TRIM16-217ENST00000579630 VIRMAQ69YN4 1812 aaKnown RBP13.32□□□□□ -0.28
TRIM16-217ENST00000579630 CHL1O00533 1208 aa13.32□□□□□ -0.28
TRIM16-217ENST00000579630 APAF1O14727 1248 aa13.32□□□□□ -0.28
TRIM16-217ENST00000579630 GIGYF1O75420 1035 aaPredicted RBP13.32□□□□□ -0.28
TRIM16-217ENST00000579630 MMP10P09238 476 aa13.32□□□□□ -0.28
TRIM16-217ENST00000579630 IL6STP40189 918 aaPredicted RBP13.32□□□□□ -0.28
TRIM16-217ENST00000579630 LMOD3Q0VAK6 560 aa13.32□□□□□ -0.28
TRIM16-217ENST00000579630 FKBP8Q14318 412 aa13.32□□□□□ -0.28
TRIM16-217ENST00000579630 CD2APQ9Y5K6 639 aa13.32□□□□□ -0.28
TRIM16-217ENST00000579630 NBPF26B4DH59 902 aa13.31□□□□□ -0.28
TRIM16-217ENST00000579630 USPL1Q5W0Q7 1092 aa13.31□□□□□ -0.28
TRIM16-217ENST00000579630 NBPF10Q6P3W6 841 aaKnown RBP13.31□□□□□ -0.28
TRIM16-217ENST00000579630 NBPF15Q8N660 670 aa13.31□□□□□ -0.28
TRIM16-217ENST00000579630 NLGN2Q8NFZ4 835 aa13.31□□□□□ -0.28
TRIM16-217ENST00000579630 A0A087WZG4 1122 aa13.3□□□□□ -0.28
TRIM16-217ENST00000579630 ZPR1O75312 459 aa13.3□□□□□ -0.28
TRIM16-217ENST00000579630 COL15A1P39059 1388 aa13.3□□□□□ -0.28
TRIM16-217ENST00000579630 MRS2Q9HD23 443 aa13.29□□□□□ -0.28
TRIM16-217ENST00000579630 TSPYL4Q9UJ04 414 aa13.29□□□□□ -0.28
TRIM16-217ENST00000579630 ZNF853P0CG23 659 aa13.28□□□□□ -0.28
TRIM16-217ENST00000579630 PIP4K2AP48426 406 aaPredicted RBP13.28□□□□□ -0.28
TRIM16-217ENST00000579630 DDR1Q08345 913 aa13.28□□□□□ -0.28
TRIM16-217ENST00000579630 KLHL34Q8N239 644 aa13.28□□□□□ -0.28
TRIM16-217ENST00000579630 TBC1D2BQ9UPU7 963 aa13.28□□□□□ -0.28
TRIM16-217ENST00000579630 DLG5Q8TDM6 1919 aa13.28□□□□□ -0.28
TRIM16-217ENST00000579630 POLRMTO00411 1230 aaKnown RBP13.27□□□□□ -0.29
TRIM16-217ENST00000579630 NFIXQ14938 502 aa13.27□□□□□ -0.29
TRIM16-217ENST00000579630 PARP3Q9Y6F1 533 aa13.27□□□□□ -0.29
TRIM16-217ENST00000579630 CAMTA2O94983 1202 aa13.26□□□□□ -0.29
TRIM16-217ENST00000579630 NCBP3Q53F19 620 aaKnown RBP13.26□□□□□ -0.29
TRIM16-217ENST00000579630 CFAP44Q96MT7 982 aa13.26□□□□□ -0.29
TRIM16-217ENST00000579630 DCAF8L1A6NGE4 600 aa13.25□□□□□ -0.29
TRIM16-217ENST00000579630 TGFB2P61812 414 aa13.25□□□□□ -0.29
TRIM16-217ENST00000579630 PDIA6Q15084 440 aa13.25□□□□□ -0.29
TRIM16-217ENST00000579630 UTRNP46939 3433 aa13.24□□□□□ -0.29
TRIM16-217ENST00000579630 CCDC27Q2M243 656 aa13.24□□□□□ -0.29
TRIM16-217ENST00000579630 TBC1D9BQ66K14 1250 aa13.24□□□□□ -0.29
TRIM16-217ENST00000579630 LRP10Q7Z4F1 713 aa13.24□□□□□ -0.29
TRIM16-217ENST00000579630 DZIP3Q86Y13 1208 aaKnown RBP13.24□□□□□ -0.29
TRIM16-217ENST00000579630 ZNF330Q9Y3S2 320 aaPredicted RBP13.24□□□□□ -0.29
TRIM16-217ENST00000579630 RGL2O15211 777 aa13.23□□□□□ -0.29
TRIM16-217ENST00000579630 SERPINB2P05120 415 aa13.23□□□□□ -0.29
TRIM16-217ENST00000579630 YBX3P16989 372 aaKnown RBP eCLIP13.23□□□□□ -0.29
TRIM16-217ENST00000579630 KCNA3P22001 575 aa13.23□□□□□ -0.29
TRIM16-217ENST00000579630 GPR162Q16538 588 aa13.23□□□□□ -0.29
TRIM16-217ENST00000579630 KRT24Q2M2I5 525 aa13.23□□□□□ -0.29
TRIM16-217ENST00000579630 CLEC4GQ6UXB4 293 aa13.23□□□□□ -0.29
TRIM16-217ENST00000579630 LAS1LQ9Y4W2 734 aaKnown RBP13.23□□□□□ -0.29
TRIM16-217ENST00000579630 C4AP0C0L4 1744 aa13.22□□□□□ -0.29
TRIM16-217ENST00000579630 A0A0G2JLW4 131 aa13.22□□□□□ -0.29
TRIM16-217ENST00000579630 NPM2Q86SE8 214 aaKnown RBP13.22□□□□□ -0.29
TRIM16-217ENST00000579630 WWC1Q8IX03 1113 aa13.22□□□□□ -0.29
TRIM16-217ENST00000579630 MBIPQ9NS73 344 aa13.22□□□□□ -0.29
TRIM16-217ENST00000579630 IFT57Q9NWB7 429 aa13.22□□□□□ -0.29
TRIM16-217ENST00000579630 KDM3BQ7LBC6 1761 aa13.22□□□□□ -0.29
TRIM16-217ENST00000579630 C10orf71Q711Q0 1435 aa13.22□□□□□ -0.29
TRIM16-217ENST00000579630 ERBB4Q15303 1308 aa13.21□□□□□ -0.29
TRIM16-217ENST00000579630 SENP3-EIF4A1A0A087X0R7 540 aa13.21□□□□□ -0.29
TRIM16-217ENST00000579630 DPEP1P16444 411 aa13.21□□□□□ -0.29
TRIM16-217ENST00000579630 EIF2S2P20042 333 aaKnown RBP13.21□□□□□ -0.29
TRIM16-217ENST00000579630 GNAI1P63096 354 aa13.21□□□□□ -0.29
TRIM16-217ENST00000579630 HLFQ16534 295 aa13.21□□□□□ -0.29
TRIM16-217ENST00000579630 BICDL1Q6ZP65 573 aa13.21□□□□□ -0.29
TRIM16-217ENST00000579630 ERVV-1B6SEH8 477 aa13.2□□□□□ -0.3
TRIM16-217ENST00000579630 HOXB7P09629 217 aa13.2□□□□□ -0.3
TRIM16-217ENST00000579630 MYL6BP14649 208 aa13.2□□□□□ -0.3
TRIM16-217ENST00000579630 CALD1Q05682 793 aaKnown RBP13.2□□□□□ -0.3
TRIM16-217ENST00000579630 TTLL7Q6ZT98 887 aa13.2□□□□□ -0.3
TRIM16-217ENST00000579630 FAM9BQ8IZU0 186 aa13.2□□□□□ -0.3
TRIM16-217ENST00000579630 NGEFQ8N5V2 710 aa13.2□□□□□ -0.3
TRIM16-217ENST00000579630 GRIN3BO60391 1043 aa13.19□□□□□ -0.3
TRIM16-217ENST00000579630 PROSER3Q2NL68 480 aa13.19□□□□□ -0.3
TRIM16-217ENST00000579630 DUSP27Q5VZP5 1158 aa13.19□□□□□ -0.3
TRIM16-217ENST00000579630 SETDB2Q96T68 719 aa13.19□□□□□ -0.3
TRIM16-217ENST00000579630 GOLGB1Q14789 3259 aaKnown RBP13.19□□□□□ -0.3
TRIM16-217ENST00000579630 PXDNLA1KZ92 1463 aa13.18□□□□□ -0.3
TRIM16-217ENST00000579630 ANXA1P04083 346 aa13.18□□□□□ -0.3
TRIM16-217ENST00000579630 PELP1Q8IZL8 1130 aaKnown RBP13.18□□□□□ -0.3
TRIM16-217ENST00000579630 C8orf58Q8NAV2 365 aa13.18□□□□□ -0.3
TRIM16-217ENST00000579630 MAP3K15Q6ZN16 1313 aa13.17□□□□□ -0.3
TRIM16-217ENST00000579630 CHRNA5P30532 468 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 169.4 ms