RNA–Protein interactions for RNA: ENST00000578698.1

PTPRM-209, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-209ENST00000578698 SLCO4C1Q6ZQN7 724 aa5.86□□□□□ -1.47
PTPRM-209ENST00000578698 RGS22Q8NE09 1264 aa5.86□□□□□ -1.47
PTPRM-209ENST00000578698 ZNF428Q96B54 188 aa5.86□□□□□ -1.47
PTPRM-209ENST00000578698 ZSCAN10Q96SZ4 725 aaPredicted RBP5.86□□□□□ -1.47
PTPRM-209ENST00000578698 NOP53Q9NZM5 478 aaKnown RBP5.86□□□□□ -1.47
PTPRM-209ENST00000578698 MTMR7Q9Y216 660 aa5.86□□□□□ -1.47
PTPRM-209ENST00000578698 LOC105371045A0A1W2PR82 267 aa5.85□□□□□ -1.47
PTPRM-209ENST00000578698 CENPCQ03188 943 aa5.85□□□□□ -1.47
PTPRM-209ENST00000578698 LBRQ14739 615 aaKnown RBP5.85□□□□□ -1.47
PTPRM-209ENST00000578698 TMEM214Q6NUQ4 689 aaKnown RBP5.85□□□□□ -1.47
PTPRM-209ENST00000578698 ADAMTS19Q8TE59 1207 aa5.85□□□□□ -1.47
PTPRM-209ENST00000578698 PBXIP1Q96AQ6 731 aa5.85□□□□□ -1.47
PTPRM-209ENST00000578698 ESYT1Q9BSJ8 1104 aa5.85□□□□□ -1.47
PTPRM-209ENST00000578698 GZF1Q9H116 711 aaPredicted RBP5.85□□□□□ -1.47
PTPRM-209ENST00000578698 ACIN1Q9UKV3 1341 aaKnown RBP5.84□□□□□ -1.47
PTPRM-209ENST00000578698 KRTAP9-6A0A140TA67 174 aa5.84□□□□□ -1.47
PTPRM-209ENST00000578698 SCO2A0A1W2PP80 73 aa5.84□□□□□ -1.47
PTPRM-209ENST00000578698 NEURL1BA8MQ27 555 aa5.84□□□□□ -1.47
PTPRM-209ENST00000578698 C2CD2LO14523 706 aa5.84□□□□□ -1.47
PTPRM-209ENST00000578698 GNRH1P01148 92 aa5.84□□□□□ -1.47
PTPRM-209ENST00000578698 IL2RAP01589 272 aa5.84□□□□□ -1.47
PTPRM-209ENST00000578698 HOXB4P17483 251 aaPredicted RBP5.84□□□□□ -1.47
PTPRM-209ENST00000578698 CTBSQ01459 385 aa5.84□□□□□ -1.47
PTPRM-209ENST00000578698 FOXD4L4Q8WXT5 416 aaPredicted RBP5.84□□□□□ -1.47
PTPRM-209ENST00000578698 BTBD6Q96KE9 485 aa5.84□□□□□ -1.47
PTPRM-209ENST00000578698 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.83□□□□□ -1.48
PTPRM-209ENST00000578698 MYCP01106 439 aaPredicted RBP5.83□□□□□ -1.48
PTPRM-209ENST00000578698 EPXP11678 715 aa5.83□□□□□ -1.48
PTPRM-209ENST00000578698 RFX1P22670 979 aa5.83□□□□□ -1.48
PTPRM-209ENST00000578698 ITGB7P26010 798 aa5.83□□□□□ -1.48
PTPRM-209ENST00000578698 MSX1P28360 303 aa5.83□□□□□ -1.48
PTPRM-209ENST00000578698 DGKGP49619 791 aa5.83□□□□□ -1.48
PTPRM-209ENST00000578698 PDE4CQ08493 712 aa5.83□□□□□ -1.48
PTPRM-209ENST00000578698 UBAP2LQ14157 1087 aaKnown RBP5.83□□□□□ -1.48
PTPRM-209ENST00000578698 C4orf17Q53FE4 359 aa5.83□□□□□ -1.48
PTPRM-209ENST00000578698 RNF135Q8IUD6 432 aa5.83□□□□□ -1.48
PTPRM-209ENST00000578698 BNIP3LO60238 219 aa5.82□□□□□ -1.48
PTPRM-209ENST00000578698 SOX11P35716 441 aa5.82□□□□□ -1.48
PTPRM-209ENST00000578698 CFAP70Q5T0N1 1121 aa5.82□□□□□ -1.48
PTPRM-209ENST00000578698 ZNF592Q92610 1267 aa5.82□□□□□ -1.48
PTPRM-209ENST00000578698 PPP1R12CQ9BZL4 782 aa5.82□□□□□ -1.48
PTPRM-209ENST00000578698 PALM3A6NDB9 673 aaPredicted RBP5.81□□□□□ -1.48
PTPRM-209ENST00000578698 ARAFP10398 606 aa5.81□□□□□ -1.48
PTPRM-209ENST00000578698 GATA4P43694 442 aa5.81□□□□□ -1.48
PTPRM-209ENST00000578698 MFAP1P55081 439 aaKnown RBP5.81□□□□□ -1.48
PTPRM-209ENST00000578698 MCCD1P59942 119 aaPredicted RBP5.81□□□□□ -1.48
PTPRM-209ENST00000578698 SEMA3FQ13275 785 aa5.81□□□□□ -1.48
PTPRM-209ENST00000578698 TMCO4Q5TGY1 634 aa5.81□□□□□ -1.48
PTPRM-209ENST00000578698 CHSY3Q70JA7 882 aa5.81□□□□□ -1.48
PTPRM-209ENST00000578698 EIF4G2P78344 907 aaKnown RBP eCLIP5.8□□□□□ -1.48
PTPRM-209ENST00000578698 NR1H3Q13133 447 aa5.8□□□□□ -1.48
PTPRM-209ENST00000578698 ALG2Q9H553 416 aa5.8□□□□□ -1.48
PTPRM-209ENST00000578698 USTQ9Y2C2 406 aa5.8□□□□□ -1.48
PTPRM-209ENST00000578698 LMOD1P29536 600 aaPredicted RBP5.79□□□□□ -1.48
PTPRM-209ENST00000578698 PLA2G4AP47712 749 aa5.79□□□□□ -1.48
PTPRM-209ENST00000578698 RBM25P49756 843 aaKnown RBP5.79□□□□□ -1.48
PTPRM-209ENST00000578698 ESCO1Q5FWF5 840 aa5.79□□□□□ -1.48
PTPRM-209ENST00000578698 FIGNL1Q6PIW4 674 aa5.79□□□□□ -1.48
PTPRM-209ENST00000578698 TBC1D9Q6ZT07 1266 aa5.79□□□□□ -1.48
PTPRM-209ENST00000578698 KRTAP1-3Q8IUG1 177 aa5.79□□□□□ -1.48
PTPRM-209ENST00000578698 RHBDD1Q8TEB9 315 aa5.79□□□□□ -1.48
PTPRM-209ENST00000578698 UCN2Q96RP3 112 aa5.79□□□□□ -1.48
PTPRM-209ENST00000578698 FHDC1Q9C0D6 1143 aaPredicted RBP5.79□□□□□ -1.48
PTPRM-209ENST00000578698 NDFIP2Q9NV92 336 aa5.79□□□□□ -1.48
PTPRM-209ENST00000578698 DCDC2BA2VCK2 349 aa5.78□□□□□ -1.48
PTPRM-209ENST00000578698 IGSF3O75054 1194 aa5.78□□□□□ -1.48
PTPRM-209ENST00000578698 ADH6P28332 368 aa5.78□□□□□ -1.48
PTPRM-209ENST00000578698 XAGE2Q96GT9 111 aa5.78□□□□□ -1.48
PTPRM-209ENST00000578698 CRISPLD1Q9H336 500 aa5.78□□□□□ -1.48
PTPRM-209ENST00000578698 PATL2C9JE40 543 aaKnown RBP5.77□□□□□ -1.49
PTPRM-209ENST00000578698 SPATA31C1P0DKV0 1188 aa5.77□□□□□ -1.49
PTPRM-209ENST00000578698 TLR1Q15399 786 aa5.77□□□□□ -1.49
PTPRM-209ENST00000578698 CDCA7Q9BWT1 371 aaPredicted RBP5.77□□□□□ -1.49
PTPRM-209ENST00000578698 PLVAPQ9BX97 442 aa5.77□□□□□ -1.49
PTPRM-209ENST00000578698 ZCCHC2Q9C0B9 1178 aaKnown RBP5.77□□□□□ -1.49
PTPRM-209ENST00000578698 TFIP11Q9UBB9 837 aaKnown RBP5.77□□□□□ -1.49
PTPRM-209ENST00000578698 PCDHGC4Q9Y5F7 938 aa5.77□□□□□ -1.49
PTPRM-209ENST00000578698 HRH3Q9Y5N1 445 aa5.77□□□□□ -1.49
PTPRM-209ENST00000578698 ATXN7O15265 892 aaPredicted RBP5.76□□□□□ -1.49
PTPRM-209ENST00000578698 STAU1O95793 577 aaKnown RBP5.76□□□□□ -1.49
PTPRM-209ENST00000578698 CD33P20138 364 aa5.76□□□□□ -1.49
PTPRM-209ENST00000578698 AIDAQ96BJ3 306 aa5.76□□□□□ -1.49
PTPRM-209ENST00000578698 TRIM11Q96F44 468 aa5.76□□□□□ -1.49
PTPRM-209ENST00000578698 MAFBQ9Y5Q3 323 aaPredicted RBP5.76□□□□□ -1.49
PTPRM-209ENST00000578698 KHNYNO15037 678 aaKnown RBP5.75□□□□□ -1.49
PTPRM-209ENST00000578698 RSPO4Q2I0M5 234 aaPredicted RBP5.75□□□□□ -1.49
PTPRM-209ENST00000578698 FCHSD1Q86WN1 690 aa5.75□□□□□ -1.49
PTPRM-209ENST00000578698 CCDC85AQ96PX6 553 aaPredicted RBP5.75□□□□□ -1.49
PTPRM-209ENST00000578698 CARNS1A5YM72 827 aa5.74□□□□□ -1.49
PTPRM-209ENST00000578698 ATP9BO43861 1147 aa5.74□□□□□ -1.49
PTPRM-209ENST00000578698 BRD1O95696 1058 aa5.74□□□□□ -1.49
PTPRM-209ENST00000578698 PCBP4P57723 403 aaKnown RBP5.74□□□□□ -1.49
PTPRM-209ENST00000578698 SRPK2P78362 688 aaKnown RBP5.74□□□□□ -1.49
PTPRM-209ENST00000578698 PRRT3Q5FWE3 981 aa5.74□□□□□ -1.49
PTPRM-209ENST00000578698 ARSJQ5FYB0 599 aaPredicted RBP5.74□□□□□ -1.49
PTPRM-209ENST00000578698 NBPF11Q86T75 865 aa5.74□□□□□ -1.49
PTPRM-209ENST00000578698 PPARGC1BQ86YN6 1023 aaKnown RBP5.74□□□□□ -1.49
PTPRM-209ENST00000578698 ETNK1Q9HBU6 452 aa5.74□□□□□ -1.49
PTPRM-209ENST00000578698 ZFP64Q9NPA5 681 aa5.74□□□□□ -1.49
PTPRM-209ENST00000578698 DNAAF2Q9NVR5 837 aaKnown RBP5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms