RNA–Protein interactions for RNA: ENST00000578600.1

PTPRM-208, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 2

Gene PTPRM, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-208ENST00000578600 FOXK2Q01167 660 aa8.89□□□□□ -0.99
PTPRM-208ENST00000578600 FKBP5Q13451 457 aaPredicted RBP8.89□□□□□ -0.99
PTPRM-208ENST00000578600 MTFR1Q15390 333 aa8.89□□□□□ -0.99
PTPRM-208ENST00000578600 FOXD4L5Q5VV16 416 aaPredicted RBP8.89□□□□□ -0.99
PTPRM-208ENST00000578600 FOXD4L4Q8WXT5 416 aaPredicted RBP8.89□□□□□ -0.99
PTPRM-208ENST00000578600 PURBQ96QR8 312 aaKnown RBP8.89□□□□□ -0.99
PTPRM-208ENST00000578600 ARHGEF10LQ9HCE6 1279 aa8.89□□□□□ -0.99
PTPRM-208ENST00000578600 ZFAND3Q9H8U3 227 aa8.88□□□□□ -0.99
PTPRM-208ENST00000578600 RAB6BQ9NRW1 208 aa8.88□□□□□ -0.99
PTPRM-208ENST00000578600 PRG4Q92954 1404 aaPredicted RBP8.88□□□□□ -0.99
PTPRM-208ENST00000578600 ATAD2Q6PL18 1390 aa8.87□□□□□ -0.99
PTPRM-208ENST00000578600 A0A1W2PRU2 124 aa8.87□□□□□ -0.99
PTPRM-208ENST00000578600 PTGIRP43119 386 aa8.87□□□□□ -0.99
PTPRM-208ENST00000578600 SERPINB4P48594 390 aa8.87□□□□□ -0.99
PTPRM-208ENST00000578600 SMTNP53814 917 aa8.87□□□□□ -0.99
PTPRM-208ENST00000578600 WDR4P57081 412 aaKnown RBP8.87□□□□□ -0.99
PTPRM-208ENST00000578600 GAS2L2Q8NHY3 880 aa8.87□□□□□ -0.99
PTPRM-208ENST00000578600 ESYT1Q9BSJ8 1104 aa8.87□□□□□ -0.99
PTPRM-208ENST00000578600 TSPAN10Q9H1Z9 355 aaPredicted RBP8.87□□□□□ -0.99
PTPRM-208ENST00000578600 SCHIP1Q9P0W5 487 aaPredicted RBP8.87□□□□□ -0.99
PTPRM-208ENST00000578600 CEP170Q5SW79 1584 aa8.86□□□□□ -0.99
PTPRM-208ENST00000578600 MAPKBP1O60336 1514 aa8.86□□□□□ -0.99
PTPRM-208ENST00000578600 CUX1P39880 1505 aa8.86□□□□□ -0.99
PTPRM-208ENST00000578600 SOWAHDA6NJG2 315 aa8.86□□□□□ -0.99
PTPRM-208ENST00000578600 A6NJY4 79 aa8.86□□□□□ -0.99
PTPRM-208ENST00000578600 FOXO3O43524 673 aa8.86□□□□□ -0.99
PTPRM-208ENST00000578600 CLN3Q13286 438 aa8.86□□□□□ -0.99
PTPRM-208ENST00000578600 CAPN12Q6ZSI9 719 aa8.86□□□□□ -0.99
PTPRM-208ENST00000578600 SCG3Q8WXD2 468 aaKnown RBP8.86□□□□□ -0.99
PTPRM-208ENST00000578600 CNKSR1Q969H4 720 aa8.86□□□□□ -0.99
PTPRM-208ENST00000578600 COL26A1Q96A83 441 aa8.86□□□□□ -0.99
PTPRM-208ENST00000578600 RBM25P49756 843 aaKnown RBP8.85□□□□□ -0.99
PTPRM-208ENST00000578600 HPS1Q92902 700 aa8.85□□□□□ -0.99
PTPRM-208ENST00000578600 AGBL1Q96MI9 1066 aa8.85□□□□□ -0.99
PTPRM-208ENST00000578600 FHDC1Q9C0D6 1143 aaPredicted RBP8.85□□□□□ -0.99
PTPRM-208ENST00000578600 SEPT3Q9UH03 358 aa8.85□□□□□ -0.99
PTPRM-208ENST00000578600 EGFL7Q9UHF1 273 aa8.85□□□□□ -0.99
PTPRM-208ENST00000578600 IQSEC3Q9UPP2 1182 aaPredicted RBP8.85□□□□□ -0.99
PTPRM-208ENST00000578600 CDK2AP1O14519 115 aa8.84□□□□□ -0.99
PTPRM-208ENST00000578600 STAG2Q8N3U4 1231 aa8.84□□□□□ -0.99
PTPRM-208ENST00000578600 PTCD1O75127 700 aaKnown RBP8.83□□□□□ -1
PTPRM-208ENST00000578600 CENPCQ03188 943 aa8.83□□□□□ -1
PTPRM-208ENST00000578600 SLC9A9Q8IVB4 645 aa8.83□□□□□ -1
PTPRM-208ENST00000578600 ZNF295-AS1Q8N0V1 137 aa8.83□□□□□ -1
PTPRM-208ENST00000578600 MEIOBQ8N635 442 aa8.83□□□□□ -1
PTPRM-208ENST00000578600 FBXO41Q8TF61 875 aa8.83□□□□□ -1
PTPRM-208ENST00000578600 MKNK1Q9BUB5 465 aa8.83□□□□□ -1
PTPRM-208ENST00000578600 USP3Q9Y6I4 520 aa8.83□□□□□ -1
PTPRM-208ENST00000578600 ERICH3Q5RHP9 1530 aa8.82□□□□□ -1
PTPRM-208ENST00000578600 RGS20O76081 388 aa8.82□□□□□ -1
PTPRM-208ENST00000578600 TLR1Q15399 786 aa8.82□□□□□ -1
PTPRM-208ENST00000578600 TBCELQ5QJ74 424 aa8.82□□□□□ -1
PTPRM-208ENST00000578600 POTEAQ6S8J7 498 aa8.82□□□□□ -1
PTPRM-208ENST00000578600 GTF3C2Q8WUA4 911 aaPredicted RBP8.82□□□□□ -1
PTPRM-208ENST00000578600 C2orf49Q9BVC5 232 aaPredicted RBP8.82□□□□□ -1
PTPRM-208ENST00000578600 KDM6BO15054 1643 aa8.81□□□□□ -1
PTPRM-208ENST00000578600 SHROOM2Q13796 1616 aa8.81□□□□□ -1
PTPRM-208ENST00000578600 PPP1R12BO60237 982 aaPredicted RBP8.81□□□□□ -1
PTPRM-208ENST00000578600 RELBQ01201 579 aa8.81□□□□□ -1
PTPRM-208ENST00000578600 ZNF395Q9H8N7 513 aaPredicted RBP8.81□□□□□ -1
PTPRM-208ENST00000578600 DNMT3AQ9Y6K1 912 aaPredicted RBP8.81□□□□□ -1
PTPRM-208ENST00000578600 ABCA5Q8WWZ7 1642 aa8.8□□□□□ -1
PTPRM-208ENST00000578600 ICMTO60725 284 aa8.8□□□□□ -1
PTPRM-208ENST00000578600 ECM1Q16610 540 aa8.8□□□□□ -1
PTPRM-208ENST00000578600 PBRM1Q86U86 1689 aa8.79□□□□□ -1
PTPRM-208ENST00000578600 MEN1O00255 615 aa8.79□□□□□ -1
PTPRM-208ENST00000578600 ABL1P00519 1130 aa8.79□□□□□ -1
PTPRM-208ENST00000578600 PSMA6P60900 246 aaKnown RBP8.79□□□□□ -1
PTPRM-208ENST00000578600 ZNF211Q13398 564 aaPredicted RBP8.79□□□□□ -1
PTPRM-208ENST00000578600 TEAD4Q15561 434 aa8.79□□□□□ -1
PTPRM-208ENST00000578600 PPARGC1BQ86YN6 1023 aaKnown RBP8.79□□□□□ -1
PTPRM-208ENST00000578600 NLRP3Q96P20 1036 aa8.79□□□□□ -1
PTPRM-208ENST00000578600 AMOTL2Q9Y2J4 779 aa8.79□□□□□ -1
PTPRM-208ENST00000578600 ERCC6L2Q5T890 1561 aa8.78□□□□□ -1
PTPRM-208ENST00000578600 PLB1Q6P1J6 1458 aa8.78□□□□□ -1
PTPRM-208ENST00000578600 HIRAP54198 1017 aaPredicted RBP8.78□□□□□ -1
PTPRM-208ENST00000578600 NAA30Q147X3 362 aaPredicted RBP8.78□□□□□ -1
PTPRM-208ENST00000578600 FAM9AQ8IZU1 332 aaPredicted RBP8.78□□□□□ -1
PTPRM-208ENST00000578600 ZDHHC1Q8WTX9 485 aa8.78□□□□□ -1
PTPRM-208ENST00000578600 GRIP2Q9C0E4 1043 aa8.78□□□□□ -1
PTPRM-208ENST00000578600 ANO2Q9NQ90 1003 aa8.78□□□□□ -1
PTPRM-208ENST00000578600 BIN2Q9UBW5 565 aaPredicted RBP8.78□□□□□ -1
PTPRM-208ENST00000578600 ADAMTS12P58397 1594 aa8.78□□□□□ -1
PTPRM-208ENST00000578600 GPC1P35052 558 aa8.77□□□□□ -1.01
PTPRM-208ENST00000578600 RNF144AP50876 292 aaPredicted RBP8.77□□□□□ -1.01
PTPRM-208ENST00000578600 FKBP4Q02790 459 aaKnown RBP eCLIP8.77□□□□□ -1.01
PTPRM-208ENST00000578600 SF3B2Q13435 895 aaKnown RBP8.77□□□□□ -1.01
PTPRM-208ENST00000578600 NBPF15Q8N660 670 aa8.77□□□□□ -1.01
PTPRM-208ENST00000578600 ZNF428Q96B54 188 aa8.77□□□□□ -1.01
PTPRM-208ENST00000578600 TSEN34Q9BSV6 310 aaKnown RBP8.77□□□□□ -1.01
PTPRM-208ENST00000578600 PTPRGP23470 1445 aa8.77□□□□□ -1.01
PTPRM-208ENST00000578600 CARMIL2Q6F5E8 1435 aa8.77□□□□□ -1.01
PTPRM-208ENST00000578600 EML1O00423 815 aa8.76□□□□□ -1.01
PTPRM-208ENST00000578600 CAPN5O15484 640 aaPredicted RBP8.76□□□□□ -1.01
PTPRM-208ENST00000578600 SPINT1O43278 529 aa8.76□□□□□ -1.01
PTPRM-208ENST00000578600 NPR3P17342 541 aa8.76□□□□□ -1.01
PTPRM-208ENST00000578600 HELQQ8TDG4 1101 aa8.76□□□□□ -1.01
PTPRM-208ENST00000578600 ZSCAN10Q96SZ4 725 aaPredicted RBP8.76□□□□□ -1.01
PTPRM-208ENST00000578600 SAP130Q9H0E3 1048 aa8.76□□□□□ -1.01
PTPRM-208ENST00000578600 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms