RNA–Protein interactions for RNA: ENST00000578297.1

LIMD2-204, Transcript of LIM domain containing 2, humanhuman

TSL 2

Gene LIMD2, Length 760 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-204ENST00000578297 MIS18AQ9NYP9 233 aa30.38■■■□□ 2.45
LIMD2-204ENST00000578297 MSL1Q68DK7 614 aa30.37■■■□□ 2.45
LIMD2-204ENST00000578297 RFC4P35249 363 aa30.36■■■□□ 2.45
LIMD2-204ENST00000578297 TRIM35Q9UPQ4 493 aa30.36■■■□□ 2.45
LIMD2-204ENST00000578297 ZBTB1Q9Y2K1 713 aa30.35■■■□□ 2.45
LIMD2-204ENST00000578297 KDM3BQ7LBC6 1761 aa30.35■■■□□ 2.45
LIMD2-204ENST00000578297 SOS1Q07889 1333 aaPredicted RBP30.34■■■□□ 2.45
LIMD2-204ENST00000578297 APAF1O14727 1248 aa30.34■■■□□ 2.45
LIMD2-204ENST00000578297 SNRPA1P09661 255 aaKnown RBP30.34■■■□□ 2.45
LIMD2-204ENST00000578297 BABAM1Q9NWV8 329 aa30.33■■■□□ 2.45
LIMD2-204ENST00000578297 C4AP0C0L4 1744 aa30.33■■■□□ 2.45
LIMD2-204ENST00000578297 FHDC1Q9C0D6 1143 aaPredicted RBP30.31■■■□□ 2.44
LIMD2-204ENST00000578297 USP16Q9Y5T5 823 aa30.31■■■□□ 2.44
LIMD2-204ENST00000578297 PRAMEF22A3QJZ6 481 aa30.29■■■□□ 2.44
LIMD2-204ENST00000578297 GYS1P13807 737 aa30.29■■■□□ 2.44
LIMD2-204ENST00000578297 CANXP27824 592 aaKnown RBP30.29■■■□□ 2.44
LIMD2-204ENST00000578297 EIF4A1P60842 406 aaKnown RBP30.29■■■□□ 2.44
LIMD2-204ENST00000578297 NLGN1Q8N2Q7 840 aa30.29■■■□□ 2.44
LIMD2-204ENST00000578297 TSPYL4Q9UJ04 414 aa30.29■■■□□ 2.44
LIMD2-204ENST00000578297 USP42Q9H9J4 1324 aaKnown RBP30.28■■■□□ 2.44
LIMD2-204ENST00000578297 COL15A1P39059 1388 aa30.28■■■□□ 2.44
LIMD2-204ENST00000578297 A1BGP04217 495 aa30.27■■■□□ 2.44
LIMD2-204ENST00000578297 EIF5P55010 431 aaKnown RBP30.27■■■□□ 2.44
LIMD2-204ENST00000578297 SYT17Q9BSW7 474 aa30.27■■■□□ 2.44
LIMD2-204ENST00000578297 GIGYF1O75420 1035 aaPredicted RBP30.25■■■□□ 2.43
LIMD2-204ENST00000578297 IL6STP40189 918 aaPredicted RBP30.25■■■□□ 2.43
LIMD2-204ENST00000578297 SRP68Q9UHB9 627 aaKnown RBP30.25■■■□□ 2.43
LIMD2-204ENST00000578297 ZPR1O75312 459 aa30.24■■■□□ 2.43
LIMD2-204ENST00000578297 CHL1O00533 1208 aa30.23■■■□□ 2.43
LIMD2-204ENST00000578297 NARFQ9UHQ1 456 aa30.23■■■□□ 2.43
LIMD2-204ENST00000578297 A0A087WZG4 1122 aa30.22■■■□□ 2.43
LIMD2-204ENST00000578297 MMP10P09238 476 aa30.21■■■□□ 2.43
LIMD2-204ENST00000578297 LAMB4A4D0S4 1761 aa30.2■■■□□ 2.43
LIMD2-204ENST00000578297 USPL1Q5W0Q7 1092 aa30.2■■■□□ 2.43
LIMD2-204ENST00000578297 FKBP8Q14318 412 aa30.19■■■□□ 2.42
LIMD2-204ENST00000578297 CFAP44Q96MT7 982 aa30.19■■■□□ 2.42
LIMD2-204ENST00000578297 LAS1LQ9Y4W2 734 aaKnown RBP30.19■■■□□ 2.42
LIMD2-204ENST00000578297 CALD1Q05682 793 aaKnown RBP30.18■■■□□ 2.42
LIMD2-204ENST00000578297 NCBP3Q53F19 620 aaKnown RBP30.18■■■□□ 2.42
LIMD2-204ENST00000578297 KLHL34Q8N239 644 aa30.18■■■□□ 2.42
LIMD2-204ENST00000578297 CCDC27Q2M243 656 aa30.17■■■□□ 2.42
LIMD2-204ENST00000578297 NPM2Q86SE8 214 aaKnown RBP30.17■■■□□ 2.42
LIMD2-204ENST00000578297 FAM9BQ8IZU0 186 aa30.17■■■□□ 2.42
LIMD2-204ENST00000578297 ZNF330Q9Y3S2 320 aaPredicted RBP30.17■■■□□ 2.42
LIMD2-204ENST00000578297 CD2APQ9Y5K6 639 aa30.17■■■□□ 2.42
LIMD2-204ENST00000578297 NBPF26B4DH59 902 aa30.15■■■□□ 2.42
LIMD2-204ENST00000578297 ZNF853P0CG23 659 aa30.15■■■□□ 2.42
LIMD2-204ENST00000578297 PIP4K2AP48426 406 aaPredicted RBP30.15■■■□□ 2.42
LIMD2-204ENST00000578297 NBPF10Q6P3W6 841 aaKnown RBP30.15■■■□□ 2.42
LIMD2-204ENST00000578297 NBPF15Q8N660 670 aa30.15■■■□□ 2.42
LIMD2-204ENST00000578297 BCL2L12Q9HB09 334 aa30.15■■■□□ 2.42
LIMD2-204ENST00000578297 TM4SF1P30408 202 aa30.14■■■□□ 2.42
LIMD2-204ENST00000578297 PARP3Q9Y6F1 533 aa30.14■■■□□ 2.42
LIMD2-204ENST00000578297 IFT57Q9NWB7 429 aa30.13■■■□□ 2.41
LIMD2-204ENST00000578297 TBC1D2BQ9UPU7 963 aa30.13■■■□□ 2.41
LIMD2-204ENST00000578297 GNAI1P63096 354 aa30.12■■■□□ 2.41
LIMD2-204ENST00000578297 DZIP3Q86Y13 1208 aaKnown RBP30.11■■■□□ 2.41
LIMD2-204ENST00000578297 WWC1Q8IX03 1113 aa30.11■■■□□ 2.41
LIMD2-204ENST00000578297 NLGN2Q8NFZ4 835 aa30.11■■■□□ 2.41
LIMD2-204ENST00000578297 MBIPQ9NS73 344 aa30.11■■■□□ 2.41
LIMD2-204ENST00000578297 SENP3-EIF4A1A0A087X0R7 540 aa30.09■■■□□ 2.41
LIMD2-204ENST00000578297 CCER2I3L3R5 266 aa30.09■■■□□ 2.41
LIMD2-204ENST00000578297 CAMTA2O94983 1202 aa30.09■■■□□ 2.41
LIMD2-204ENST00000578297 SCN7AQ01118 1682 aa30.09■■■□□ 2.41
LIMD2-204ENST00000578297 DDR1Q08345 913 aa30.09■■■□□ 2.41
LIMD2-204ENST00000578297 ERBB4Q15303 1308 aa30.09■■■□□ 2.41
LIMD2-204ENST00000578297 DCAF8L1A6NGE4 600 aa30.08■■■□□ 2.41
LIMD2-204ENST00000578297 POLRMTO00411 1230 aaKnown RBP30.08■■■□□ 2.41
LIMD2-204ENST00000578297 NFIXQ14938 502 aa30.08■■■□□ 2.41
LIMD2-204ENST00000578297 KRT24Q2M2I5 525 aa30.07■■■□□ 2.4
LIMD2-204ENST00000578297 HOXB7P09629 217 aa30.06■■■□□ 2.4
LIMD2-204ENST00000578297 EIF2S2P20042 333 aaKnown RBP30.06■■■□□ 2.4
LIMD2-204ENST00000578297 KIF13BQ9NQT8 1826 aa30.06■■■□□ 2.4
LIMD2-204ENST00000578297 BCORQ6W2J9 1755 aa30.05■■■□□ 2.4
LIMD2-204ENST00000578297 DIEXFQ68CQ4 756 aaKnown RBP30.05■■■□□ 2.4
LIMD2-204ENST00000578297 C10orf71Q711Q0 1435 aa30.05■■■□□ 2.4
LIMD2-204ENST00000578297 RGL2O15211 777 aa30.04■■■□□ 2.4
LIMD2-204ENST00000578297 CLEC4GQ6UXB4 293 aa30.04■■■□□ 2.4
LIMD2-204ENST00000578297 NGEFQ8N5V2 710 aa30.04■■■□□ 2.4
LIMD2-204ENST00000578297 MYL6BP14649 208 aa30.03■■■□□ 2.4
LIMD2-204ENST00000578297 TBC1D9BQ66K14 1250 aa30.03■■■□□ 2.4
LIMD2-204ENST00000578297 IL16Q14005 1332 aa30.02■■■□□ 2.4
LIMD2-204ENST00000578297 PDIA6Q15084 440 aa30.02■■■□□ 2.4
LIMD2-204ENST00000578297 DUSP27Q5VZP5 1158 aa30.01■■■□□ 2.39
LIMD2-204ENST00000578297 ZNF652Q9Y2D9 606 aa30.01■■■□□ 2.39
LIMD2-204ENST00000578297 TGFB2P61812 414 aa30■■■□□ 2.39
LIMD2-204ENST00000578297 BICDL1Q6ZP65 573 aa30■■■□□ 2.39
LIMD2-204ENST00000578297 LRP10Q7Z4F1 713 aa30■■■□□ 2.39
LIMD2-204ENST00000578297 WDR63Q8IWG1 891 aa30■■■□□ 2.39
LIMD2-204ENST00000578297 SALL2Q9Y467 1007 aaPredicted RBP30■■■□□ 2.39
LIMD2-204ENST00000578297 NRXN2Q9P2S2 1712 aa29.99■■■□□ 2.39
LIMD2-204ENST00000578297 SERPINB2P05120 415 aa29.99■■■□□ 2.39
LIMD2-204ENST00000578297 AFDNP55196 1824 aaKnown RBP29.99■■■□□ 2.39
LIMD2-204ENST00000578297 GOLGB1Q14789 3259 aaKnown RBP29.98■■■□□ 2.39
LIMD2-204ENST00000578297 NECTIN2Q92692 538 aa29.98■■■□□ 2.39
LIMD2-204ENST00000578297 SETDB2Q96T68 719 aa29.98■■■□□ 2.39
LIMD2-204ENST00000578297 UTRNP46939 3433 aa29.97■■■□□ 2.39
LIMD2-204ENST00000578297 ERVV-1B6SEH8 477 aa29.97■■■□□ 2.39
LIMD2-204ENST00000578297 HDGFL1Q5TGJ6 251 aa29.97■■■□□ 2.39
LIMD2-204ENST00000578297 CARMIL3Q8ND23 1372 aa29.97■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms