RNA–Protein interactions for RNA: ENST00000577337.5

PGAP3-205, Transcript of post-GPI attachment to proteins 3, humanhuman

TSL 3

Gene PGAP3, Length 587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP3-205ENST00000577337 C4BP0C0L5 1744 aa20.1■□□□□ 0.81
PGAP3-205ENST00000577337 CNTNAP4Q9C0A0 1308 aa20.1■□□□□ 0.81
PGAP3-205ENST00000577337 ELL2O00472 640 aaPredicted RBP20.1■□□□□ 0.81
PGAP3-205ENST00000577337 EXOSC9Q06265 439 aaKnown RBP20.1■□□□□ 0.81
PGAP3-205ENST00000577337 RC3H1Q5TC82 1133 aaKnown RBP20.1■□□□□ 0.81
PGAP3-205ENST00000577337 AK7Q96M32 723 aa20.1■□□□□ 0.81
PGAP3-205ENST00000577337 SOS1Q07889 1333 aaPredicted RBP20.09■□□□□ 0.81
PGAP3-205ENST00000577337 EIF2S2P20042 333 aaKnown RBP20.09■□□□□ 0.81
PGAP3-205ENST00000577337 CRKLP46109 303 aaKnown RBP20.09■□□□□ 0.81
PGAP3-205ENST00000577337 AKT1S1Q96B36 256 aa20.09■□□□□ 0.81
PGAP3-205ENST00000577337 CCDC87Q9NVE4 849 aa20.09■□□□□ 0.81
PGAP3-205ENST00000577337 LAMB4A4D0S4 1761 aa20.08■□□□□ 0.81
PGAP3-205ENST00000577337 SLC15A2Q16348 729 aa20.08■□□□□ 0.81
PGAP3-205ENST00000577337 ZNF827Q17R98 1081 aa20.08■□□□□ 0.81
PGAP3-205ENST00000577337 TWISTNBQ3B726 338 aaPredicted RBP20.08■□□□□ 0.81
PGAP3-205ENST00000577337 TSPYL6Q8N831 410 aa20.08■□□□□ 0.81
PGAP3-205ENST00000577337 ANO8Q9HCE9 1232 aaPredicted RBP20.08■□□□□ 0.81
PGAP3-205ENST00000577337 GNPATO15228 680 aa20.07■□□□□ 0.8
PGAP3-205ENST00000577337 INTS5Q6P9B9 1019 aaKnown RBP20.07■□□□□ 0.8
PGAP3-205ENST00000577337 CHMP4AQ9BY43 222 aa20.07■□□□□ 0.8
PGAP3-205ENST00000577337 TFCP2L1Q9NZI6 479 aa20.07■□□□□ 0.8
PGAP3-205ENST00000577337 MYH14Q7Z406 1995 aaKnown RBP20.06■□□□□ 0.8
PGAP3-205ENST00000577337 A1BGP04217 495 aa20.06■□□□□ 0.8
PGAP3-205ENST00000577337 HDGFL1Q5TGJ6 251 aa20.06■□□□□ 0.8
PGAP3-205ENST00000577337 CANXP27824 592 aaKnown RBP20.05■□□□□ 0.8
PGAP3-205ENST00000577337 NECTIN2Q92692 538 aa20.05■□□□□ 0.8
PGAP3-205ENST00000577337 ZBTB1Q9Y2K1 713 aa20.05■□□□□ 0.8
PGAP3-205ENST00000577337 RTCBQ9Y3I0 505 aaKnown RBP20.05■□□□□ 0.8
PGAP3-205ENST00000577337 VAMP4O75379 141 aa20.04■□□□□ 0.8
PGAP3-205ENST00000577337 RPS6KA4O75676 772 aa20.04■□□□□ 0.8
PGAP3-205ENST00000577337 ERBB4Q15303 1308 aa20.03■□□□□ 0.8
PGAP3-205ENST00000577337 CCDC30Q5VVM6 783 aa20.03■□□□□ 0.8
PGAP3-205ENST00000577337 SSFA2P28290 1259 aa20.02■□□□□ 0.8
PGAP3-205ENST00000577337 IL6STP40189 918 aaPredicted RBP20.02■□□□□ 0.8
PGAP3-205ENST00000577337 NPM2Q86SE8 214 aaKnown RBP20.02■□□□□ 0.8
PGAP3-205ENST00000577337 FLAD1Q8NFF5 587 aa20.02■□□□□ 0.8
PGAP3-205ENST00000577337 UBR3Q6ZT12 1888 aa20.02■□□□□ 0.8
PGAP3-205ENST00000577337 NBPF26B4DH59 902 aa20.01■□□□□ 0.79
PGAP3-205ENST00000577337 PHF14O94880 888 aa20.01■□□□□ 0.79
PGAP3-205ENST00000577337 ADRA2BP18089 450 aa20.01■□□□□ 0.79
PGAP3-205ENST00000577337 PIP4K2AP48426 406 aaPredicted RBP20.01■□□□□ 0.79
PGAP3-205ENST00000577337 TRAPPC3LQ5T215 181 aa20.01■□□□□ 0.79
PGAP3-205ENST00000577337 NBPF10Q6P3W6 841 aaKnown RBP20.01■□□□□ 0.79
PGAP3-205ENST00000577337 NBPF15Q8N660 670 aa20.01■□□□□ 0.79
PGAP3-205ENST00000577337 DBF4Q9UBU7 674 aaPredicted RBP20.01■□□□□ 0.79
PGAP3-205ENST00000577337 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20■□□□□ 0.79
PGAP3-205ENST00000577337 EIF5P55010 431 aaKnown RBP20■□□□□ 0.79
PGAP3-205ENST00000577337 R3HDM1Q15032 1099 aaKnown RBP20■□□□□ 0.79
PGAP3-205ENST00000577337 DDX21Q9NR30 783 aaKnown RBP eCLIP20■□□□□ 0.79
PGAP3-205ENST00000577337 CHPF2Q9P2E5 772 aa20■□□□□ 0.79
PGAP3-205ENST00000577337 ZNF330Q9Y3S2 320 aaPredicted RBP20■□□□□ 0.79
PGAP3-205ENST00000577337 TUBGCP6Q96RT7 1819 aa19.99■□□□□ 0.79
PGAP3-205ENST00000577337 A0A087WZG4 1122 aa19.99■□□□□ 0.79
PGAP3-205ENST00000577337 CT47B1P0C2W7 299 aaPredicted RBP19.99■□□□□ 0.79
PGAP3-205ENST00000577337 MYL6BP14649 208 aa19.99■□□□□ 0.79
PGAP3-205ENST00000577337 PDIA6Q15084 440 aa19.99■□□□□ 0.79
PGAP3-205ENST00000577337 SMIM5Q71RC9 77 aa19.99■□□□□ 0.79
PGAP3-205ENST00000577337 AMIGO3Q86WK7 504 aa19.99■□□□□ 0.79
PGAP3-205ENST00000577337 STK31Q9BXU1 1019 aa19.99■□□□□ 0.79
PGAP3-205ENST00000577337 PNPLA7Q6ZV29 1317 aa19.99■□□□□ 0.79
PGAP3-205ENST00000577337 QSER1Q2KHR3 1735 aa19.99■□□□□ 0.79
PGAP3-205ENST00000577337 MSH5O43196 834 aa19.98■□□□□ 0.79
PGAP3-205ENST00000577337 COL15A1P39059 1388 aa19.97■□□□□ 0.79
PGAP3-205ENST00000577337 PSDA5PKW4 1024 aaPredicted RBP19.97■□□□□ 0.79
PGAP3-205ENST00000577337 TCERG1O14776 1098 aaKnown RBP19.97■□□□□ 0.79
PGAP3-205ENST00000577337 ANXA1P04083 346 aa19.97■□□□□ 0.79
PGAP3-205ENST00000577337 RFC4P35249 363 aa19.97■□□□□ 0.79
PGAP3-205ENST00000577337 PROSER3Q2NL68 480 aa19.97■□□□□ 0.79
PGAP3-205ENST00000577337 COL23A1Q86Y22 540 aaPredicted RBP19.97■□□□□ 0.79
PGAP3-205ENST00000577337 ARHGEF1Q92888 912 aaKnown RBP19.97■□□□□ 0.79
PGAP3-205ENST00000577337 ZNF428Q96B54 188 aa19.97■□□□□ 0.79
PGAP3-205ENST00000577337 HYPKQ9NX55 129 aa19.97■□□□□ 0.79
PGAP3-205ENST00000577337 ARXQ96QS3 562 aa19.96■□□□□ 0.79
PGAP3-205ENST00000577337 ZPR1O75312 459 aa19.94■□□□□ 0.78
PGAP3-205ENST00000577337 SLC4A2P04920 1241 aa19.94■□□□□ 0.78
PGAP3-205ENST00000577337 LRP10Q7Z4F1 713 aa19.94■□□□□ 0.78
PGAP3-205ENST00000577337 TBC1D2BQ9UPU7 963 aa19.94■□□□□ 0.78
PGAP3-205ENST00000577337 CACNA1FO60840 1977 aa19.94■□□□□ 0.78
PGAP3-205ENST00000577337 DZIP3Q86Y13 1208 aaKnown RBP19.93■□□□□ 0.78
PGAP3-205ENST00000577337 NARFQ9UHQ1 456 aa19.93■□□□□ 0.78
PGAP3-205ENST00000577337 AIMP1Q12904 312 aaKnown RBP19.92■□□□□ 0.78
PGAP3-205ENST00000577337 ALDH1L2Q3SY69 923 aa19.92■□□□□ 0.78
PGAP3-205ENST00000577337 KIF6Q6ZMV9 814 aa19.92■□□□□ 0.78
PGAP3-205ENST00000577337 COPS6Q7L5N1 327 aa19.92■□□□□ 0.78
PGAP3-205ENST00000577337 XAGE3Q8WTP9 111 aa19.92■□□□□ 0.78
PGAP3-205ENST00000577337 PDGFDQ9GZP0 370 aaPredicted RBP19.92■□□□□ 0.78
PGAP3-205ENST00000577337 C4AP0C0L4 1744 aa19.91■□□□□ 0.78
PGAP3-205ENST00000577337 TTLL7Q6ZT98 887 aa19.91■□□□□ 0.78
PGAP3-205ENST00000577337 SLC16A10Q8TF71 515 aa19.91■□□□□ 0.78
PGAP3-205ENST00000577337 SSH1Q8WYL5 1049 aa19.91■□□□□ 0.78
PGAP3-205ENST00000577337 SRP68Q9UHB9 627 aaKnown RBP19.91■□□□□ 0.78
PGAP3-205ENST00000577337 USP42Q9H9J4 1324 aaKnown RBP19.91■□□□□ 0.78
PGAP3-205ENST00000577337 USPL1Q5W0Q7 1092 aa19.9■□□□□ 0.78
PGAP3-205ENST00000577337 PHAXQ9H814 394 aaKnown RBP19.9■□□□□ 0.78
PGAP3-205ENST00000577337 CAMTA2O94983 1202 aa19.89■□□□□ 0.77
PGAP3-205ENST00000577337 RARSP54136 660 aaKnown RBP19.89■□□□□ 0.77
PGAP3-205ENST00000577337 CASZ1Q86V15 1759 aa19.89■□□□□ 0.77
PGAP3-205ENST00000577337 MRPL50Q8N5N7 158 aaKnown RBP19.89■□□□□ 0.77
PGAP3-205ENST00000577337 SMC4Q9NTJ3 1288 aa19.89■□□□□ 0.77
PGAP3-205ENST00000577337 MAP3K15Q6ZN16 1313 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms