RNA–Protein interactions for RNA: ENST00000576972.5

EDC4-212, Transcript of enhancer of mRNA decapping 4, humanhuman

TSL 3

Gene EDC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC4-212ENST00000576972 WDR43Q15061 677 aaKnown RBP eCLIP20.5■□□□□ 0.87
EDC4-212ENST00000576972 NFE2L2Q16236 605 aa20.5■□□□□ 0.87
EDC4-212ENST00000576972 PLEKHF1Q96S99 279 aa20.5■□□□□ 0.87
EDC4-212ENST00000576972 SOS1Q07889 1333 aaPredicted RBP20.5■□□□□ 0.87
EDC4-212ENST00000576972 USP42Q9H9J4 1324 aaKnown RBP20.5■□□□□ 0.87
EDC4-212ENST00000576972 USPL1Q5W0Q7 1092 aa20.49■□□□□ 0.87
EDC4-212ENST00000576972 NPM2Q86SE8 214 aaKnown RBP20.49■□□□□ 0.87
EDC4-212ENST00000576972 CICQ96RK0 1608 aaPredicted RBP20.49■□□□□ 0.87
EDC4-212ENST00000576972 SIPA1L3O60292 1781 aaPredicted RBP20.49■□□□□ 0.87
EDC4-212ENST00000576972 FKBP8Q14318 412 aa20.48■□□□□ 0.87
EDC4-212ENST00000576972 TAF7Q15545 349 aaPredicted RBP20.48■□□□□ 0.87
EDC4-212ENST00000576972 PRKRIP1Q9H875 184 aaPredicted RBP20.48■□□□□ 0.87
EDC4-212ENST00000576972 MIS18AQ9NYP9 233 aa20.48■□□□□ 0.87
EDC4-212ENST00000576972 UBR2Q8IWV8 1755 aa20.48■□□□□ 0.87
EDC4-212ENST00000576972 COL15A1P39059 1388 aa20.47■□□□□ 0.87
EDC4-212ENST00000576972 C4AP0C0L4 1744 aa20.47■□□□□ 0.87
EDC4-212ENST00000576972 CCDC146Q8IYE0 955 aa20.46■□□□□ 0.87
EDC4-212ENST00000576972 THUMPD2Q9BTF0 503 aaKnown RBP20.46■□□□□ 0.87
EDC4-212ENST00000576972 YBX3P16989 372 aaKnown RBP eCLIP20.45■□□□□ 0.86
EDC4-212ENST00000576972 RIPK4P57078 832 aa20.45■□□□□ 0.86
EDC4-212ENST00000576972 NARFQ9UHQ1 456 aa20.45■□□□□ 0.86
EDC4-212ENST00000576972 A0A087WZG4 1122 aa20.44■□□□□ 0.86
EDC4-212ENST00000576972 ZNF316A6NFI3 1004 aaPredicted RBP20.44■□□□□ 0.86
EDC4-212ENST00000576972 A1BGP04217 495 aa20.44■□□□□ 0.86
EDC4-212ENST00000576972 SNRPA1P09661 255 aaKnown RBP20.44■□□□□ 0.86
EDC4-212ENST00000576972 NEUROD2Q15784 382 aa20.44■□□□□ 0.86
EDC4-212ENST00000576972 PRAMEF22A3QJZ6 481 aa20.43■□□□□ 0.86
EDC4-212ENST00000576972 GRIN3BO60391 1043 aa20.43■□□□□ 0.86
EDC4-212ENST00000576972 PNISRQ8TF01 805 aaKnown RBP20.43■□□□□ 0.86
EDC4-212ENST00000576972 RRP7AQ9Y3A4 280 aaKnown RBP20.43■□□□□ 0.86
EDC4-212ENST00000576972 USP16Q9Y5T5 823 aa20.43■□□□□ 0.86
EDC4-212ENST00000576972 PIP4K2AP48426 406 aaPredicted RBP20.42■□□□□ 0.86
EDC4-212ENST00000576972 BICDL1Q6ZP65 573 aa20.42■□□□□ 0.86
EDC4-212ENST00000576972 TBC1D2BQ9UPU7 963 aa20.42■□□□□ 0.86
EDC4-212ENST00000576972 DLG5Q8TDM6 1919 aa20.42■□□□□ 0.86
EDC4-212ENST00000576972 A0A0G2JLW4 131 aa20.41■□□□□ 0.86
EDC4-212ENST00000576972 EIF5P55010 431 aaKnown RBP20.41■□□□□ 0.86
EDC4-212ENST00000576972 DDR1Q08345 913 aa20.41■□□□□ 0.86
EDC4-212ENST00000576972 IL6STP40189 918 aaPredicted RBP20.4■□□□□ 0.86
EDC4-212ENST00000576972 TMPOP42166 694 aaKnown RBP20.4■□□□□ 0.86
EDC4-212ENST00000576972 ADAMTS8Q9UP79 889 aa20.4■□□□□ 0.86
EDC4-212ENST00000576972 TM4SF1P30408 202 aa20.39■□□□□ 0.85
EDC4-212ENST00000576972 TGFB2P61812 414 aa20.39■□□□□ 0.85
EDC4-212ENST00000576972 LMOD3Q0VAK6 560 aa20.39■□□□□ 0.85
EDC4-212ENST00000576972 NFIXQ14938 502 aa20.39■□□□□ 0.85
EDC4-212ENST00000576972 RUNDC1Q96C34 613 aa20.39■□□□□ 0.85
EDC4-212ENST00000576972 POLRMTO00411 1230 aaKnown RBP20.38■□□□□ 0.85
EDC4-212ENST00000576972 C10orf71Q711Q0 1435 aa20.37■□□□□ 0.85
EDC4-212ENST00000576972 GOLGB1Q14789 3259 aaKnown RBP20.37■□□□□ 0.85
EDC4-212ENST00000576972 DPEP1P16444 411 aa20.37■□□□□ 0.85
EDC4-212ENST00000576972 BCL2L12Q9HB09 334 aa20.37■□□□□ 0.85
EDC4-212ENST00000576972 TSPYL4Q9UJ04 414 aa20.37■□□□□ 0.85
EDC4-212ENST00000576972 BCS1LQ9Y276 419 aa20.37■□□□□ 0.85
EDC4-212ENST00000576972 SERPINB2P05120 415 aa20.36■□□□□ 0.85
EDC4-212ENST00000576972 DZIP3Q86Y13 1208 aaKnown RBP20.36■□□□□ 0.85
EDC4-212ENST00000576972 PXDNLA1KZ92 1463 aa20.36■□□□□ 0.85
EDC4-212ENST00000576972 LAS1LQ9Y4W2 734 aaKnown RBP20.35■□□□□ 0.85
EDC4-212ENST00000576972 NPHP1O15259 732 aa20.34■□□□□ 0.85
EDC4-212ENST00000576972 EIF4A1P60842 406 aaKnown RBP20.34■□□□□ 0.85
EDC4-212ENST00000576972 TBC1D9BQ66K14 1250 aa20.34■□□□□ 0.85
EDC4-212ENST00000576972 NGEFQ8N5V2 710 aa20.34■□□□□ 0.85
EDC4-212ENST00000576972 N4BP2Q86UW6 1770 aaPredicted RBP20.34■□□□□ 0.85
EDC4-212ENST00000576972 ANP32CO43423 234 aa20.32■□□□□ 0.84
EDC4-212ENST00000576972 GIGYF1O75420 1035 aaPredicted RBP20.32■□□□□ 0.84
EDC4-212ENST00000576972 CHRNA5P30532 468 aa20.32■□□□□ 0.84
EDC4-212ENST00000576972 ZNF784Q8NCA9 323 aaPredicted RBP20.32■□□□□ 0.84
EDC4-212ENST00000576972 NBPF26B4DH59 902 aa20.31■□□□□ 0.84
EDC4-212ENST00000576972 CAMTA2O94983 1202 aa20.31■□□□□ 0.84
EDC4-212ENST00000576972 NBPF10Q6P3W6 841 aaKnown RBP20.31■□□□□ 0.84
EDC4-212ENST00000576972 NBPF15Q8N660 670 aa20.31■□□□□ 0.84
EDC4-212ENST00000576972 PIM2Q9P1W9 311 aa20.31■□□□□ 0.84
EDC4-212ENST00000576972 KIF13BQ9NQT8 1826 aa20.31■□□□□ 0.84
EDC4-212ENST00000576972 MYL6BP14649 208 aa20.3■□□□□ 0.84
EDC4-212ENST00000576972 SETDB2Q96T68 719 aa20.3■□□□□ 0.84
EDC4-212ENST00000576972 KDM3BQ7LBC6 1761 aa20.3■□□□□ 0.84
EDC4-212ENST00000576972 ARHGAP27Q6ZUM4 889 aa20.29■□□□□ 0.84
EDC4-212ENST00000576972 CCDC24Q8N4L8 307 aa20.29■□□□□ 0.84
EDC4-212ENST00000576972 ZNF652Q9Y2D9 606 aa20.29■□□□□ 0.84
EDC4-212ENST00000576972 EIF2S2P20042 333 aaKnown RBP20.28■□□□□ 0.84
EDC4-212ENST00000576972 DALRD3Q5D0E6 543 aaKnown RBP20.28■□□□□ 0.84
EDC4-212ENST00000576972 TRIM35Q9UPQ4 493 aa20.28■□□□□ 0.84
EDC4-212ENST00000576972 CARMIL3Q8ND23 1372 aa20.27■□□□□ 0.84
EDC4-212ENST00000576972 APAF1O14727 1248 aa20.27■□□□□ 0.84
EDC4-212ENST00000576972 KCNA3P22001 575 aa20.27■□□□□ 0.84
EDC4-212ENST00000576972 CCDC184Q52MB2 194 aa20.27■□□□□ 0.84
EDC4-212ENST00000576972 KIAA1551Q9HCM1 1747 aa20.27■□□□□ 0.83
EDC4-212ENST00000576972 SCN7AQ01118 1682 aa20.26■□□□□ 0.83
EDC4-212ENST00000576972 AFDNP55196 1824 aaKnown RBP20.26■□□□□ 0.83
EDC4-212ENST00000576972 C2CD5Q86YS7 1000 aa20.26■□□□□ 0.83
EDC4-212ENST00000576972 BABAM1Q9NWV8 329 aa20.26■□□□□ 0.83
EDC4-212ENST00000576972 FAM177BA6PVY3 158 aa20.25■□□□□ 0.83
EDC4-212ENST00000576972 H0YIN7 160 aa20.25■□□□□ 0.83
EDC4-212ENST00000576972 KIF6Q6ZMV9 814 aa20.25■□□□□ 0.83
EDC4-212ENST00000576972 CNBD1Q8NA66 436 aa20.25■□□□□ 0.83
EDC4-212ENST00000576972 NECTIN2Q92692 538 aa20.25■□□□□ 0.83
EDC4-212ENST00000576972 MRS2Q9HD23 443 aa20.25■□□□□ 0.83
EDC4-212ENST00000576972 LAMB4A4D0S4 1761 aa20.25■□□□□ 0.83
EDC4-212ENST00000576972 SENP3-EIF4A1A0A087X0R7 540 aa20.24■□□□□ 0.83
EDC4-212ENST00000576972 ST5P78524 1137 aa20.24■□□□□ 0.83
EDC4-212ENST00000576972 PRR5LQ6MZQ0 368 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms