RNA–Protein interactions for RNA: ENST00000574304.5

CDC27-216, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-216ENST00000574304 NOVA2Q9UNW9 492 aaKnown RBP9.6□□□□□ -0.87
CDC27-216ENST00000574304 MSX1P28360 303 aa9.59□□□□□ -0.87
CDC27-216ENST00000574304 SV2AQ7L0J3 742 aa9.59□□□□□ -0.87
CDC27-216ENST00000574304 TRIM22Q8IYM9 498 aa9.59□□□□□ -0.87
CDC27-216ENST00000574304 FAM200AQ8TCP9 573 aa9.59□□□□□ -0.87
CDC27-216ENST00000574304 AIDAQ96BJ3 306 aa9.59□□□□□ -0.87
CDC27-216ENST00000574304 HINFPQ9BQA5 517 aa9.59□□□□□ -0.87
CDC27-216ENST00000574304 PARP3Q9Y6F1 533 aa9.59□□□□□ -0.87
CDC27-216ENST00000574304 H7C1W4 665 aa9.58□□□□□ -0.88
CDC27-216ENST00000574304 GMPRP36959 345 aa9.58□□□□□ -0.88
CDC27-216ENST00000574304 TEAD4Q15561 434 aa9.58□□□□□ -0.88
CDC27-216ENST00000574304 DBN1Q16643 649 aa9.58□□□□□ -0.88
CDC27-216ENST00000574304 NBPF1Q3BBV0 1214 aa9.58□□□□□ -0.88
CDC27-216ENST00000574304 ZDHHC1Q8WTX9 485 aa9.58□□□□□ -0.88
CDC27-216ENST00000574304 ZNF837Q96EG3 531 aaPredicted RBP9.58□□□□□ -0.88
CDC27-216ENST00000574304 GMCL1Q96IK5 515 aa9.58□□□□□ -0.88
CDC27-216ENST00000574304 ATG7O95352 703 aa9.57□□□□□ -0.88
CDC27-216ENST00000574304 ELOAQ14241 798 aaKnown RBP9.57□□□□□ -0.88
CDC27-216ENST00000574304 GPR161Q8N6U8 529 aaKnown RBP9.57□□□□□ -0.88
CDC27-216ENST00000574304 LGR5O75473 907 aa9.56□□□□□ -0.88
CDC27-216ENST00000574304 CSB-PGBD3P0DP91 1061 aa9.56□□□□□ -0.88
CDC27-216ENST00000574304 NOS2P35228 1153 aa9.56□□□□□ -0.88
CDC27-216ENST00000574304 PSMA6P60900 246 aaKnown RBP9.56□□□□□ -0.88
CDC27-216ENST00000574304 PGBD3Q8N328 593 aa9.56□□□□□ -0.88
CDC27-216ENST00000574304 C1orf216Q8TAB5 229 aa9.56□□□□□ -0.88
CDC27-216ENST00000574304 L3MBTL2Q969R5 705 aa9.56□□□□□ -0.88
CDC27-216ENST00000574304 NUCKS1Q9H1E3 243 aaKnown RBP9.56□□□□□ -0.88
CDC27-216ENST00000574304 RUBCNLQ9H714 662 aa9.56□□□□□ -0.88
CDC27-216ENST00000574304 ZMIZ1Q9ULJ6 1067 aa9.56□□□□□ -0.88
CDC27-216ENST00000574304 ZNF232Q9UNY5 417 aa9.56□□□□□ -0.88
CDC27-216ENST00000574304 SERTM1A2A2V5 107 aa9.55□□□□□ -0.88
CDC27-216ENST00000574304 C21orf2O43822 256 aa9.55□□□□□ -0.88
CDC27-216ENST00000574304 PPP1R12BO60237 982 aaPredicted RBP9.55□□□□□ -0.88
CDC27-216ENST00000574304 TATP17735 454 aaPredicted RBP9.55□□□□□ -0.88
CDC27-216ENST00000574304 ATP4AP20648 1035 aa9.55□□□□□ -0.88
CDC27-216ENST00000574304 SCG3Q8WXD2 468 aaKnown RBP9.55□□□□□ -0.88
CDC27-216ENST00000574304 ZDHHC3Q9NYG2 299 aa9.55□□□□□ -0.88
CDC27-216ENST00000574304 CHMP3Q9Y3E7 222 aa9.55□□□□□ -0.88
CDC27-216ENST00000574304 ATAD2Q6PL18 1390 aa9.54□□□□□ -0.88
CDC27-216ENST00000574304 STK32AQ8WU08 396 aa9.54□□□□□ -0.88
CDC27-216ENST00000574304 GTPBP3Q969Y2 492 aaKnown RBP9.54□□□□□ -0.88
CDC27-216ENST00000574304 EML1O00423 815 aa9.53□□□□□ -0.88
CDC27-216ENST00000574304 WIPF1O43516 503 aa9.53□□□□□ -0.88
CDC27-216ENST00000574304 TXLNAP40222 546 aa9.53□□□□□ -0.88
CDC27-216ENST00000574304 LBRQ14739 615 aaKnown RBP9.53□□□□□ -0.88
CDC27-216ENST00000574304 SH3PXD2AQ5TCZ1 1133 aa9.53□□□□□ -0.88
CDC27-216ENST00000574304 FOXR1Q6PIV2 292 aa9.53□□□□□ -0.88
CDC27-216ENST00000574304 GAS2L2Q8NHY3 880 aa9.53□□□□□ -0.88
CDC27-216ENST00000574304 CRISPLD1Q9H336 500 aa9.53□□□□□ -0.88
CDC27-216ENST00000574304 PPP1R15AO75807 674 aaPredicted RBP9.52□□□□□ -0.89
CDC27-216ENST00000574304 THBS1P07996 1170 aa9.52□□□□□ -0.89
CDC27-216ENST00000574304 ARSJQ5FYB0 599 aaPredicted RBP9.52□□□□□ -0.89
CDC27-216ENST00000574304 EFHC2Q5JST6 749 aa9.52□□□□□ -0.89
CDC27-216ENST00000574304 ARID3AQ99856 593 aa9.52□□□□□ -0.89
CDC27-216ENST00000574304 COL25A1Q9BXS0 654 aaPredicted RBP9.52□□□□□ -0.89
CDC27-216ENST00000574304 ACIN1Q9UKV3 1341 aaKnown RBP9.52□□□□□ -0.89
CDC27-216ENST00000574304 GPR25O00155 361 aa9.51□□□□□ -0.89
CDC27-216ENST00000574304 IGFBP4P22692 258 aa9.51□□□□□ -0.89
CDC27-216ENST00000574304 HIRAP54198 1017 aaPredicted RBP9.51□□□□□ -0.89
CDC27-216ENST00000574304 POTEAQ6S8J7 498 aa9.51□□□□□ -0.89
CDC27-216ENST00000574304 STAG2Q8N3U4 1231 aa9.51□□□□□ -0.89
CDC27-216ENST00000574304 CHMP7Q8WUX9 453 aaPredicted RBP9.51□□□□□ -0.89
CDC27-216ENST00000574304 SWI5Q1ZZU3 235 aa9.5□□□□□ -0.89
CDC27-216ENST00000574304 TMEM164Q5U3C3 297 aa9.5□□□□□ -0.89
CDC27-216ENST00000574304 BICDL1Q6ZP65 573 aa9.5□□□□□ -0.89
CDC27-216ENST00000574304 TRERF1Q96PN7 1200 aa9.5□□□□□ -0.89
CDC27-216ENST00000574304 C2orf49Q9BVC5 232 aaPredicted RBP9.5□□□□□ -0.89
CDC27-216ENST00000574304 HCN4Q9Y3Q4 1203 aa9.5□□□□□ -0.89
CDC27-216ENST00000574304 A0A1W2PNR3 127 aa9.49□□□□□ -0.89
CDC27-216ENST00000574304 WEE1P30291 646 aa9.49□□□□□ -0.89
CDC27-216ENST00000574304 KRT76Q01546 638 aa9.49□□□□□ -0.89
CDC27-216ENST00000574304 FAM69CQ0P6D2 419 aa9.49□□□□□ -0.89
CDC27-216ENST00000574304 RNFT1Q5M7Z0 435 aa9.49□□□□□ -0.89
CDC27-216ENST00000574304 CNTNAP3BQ96NU0 1288 aa9.49□□□□□ -0.89
CDC27-216ENST00000574304 ZIC5Q96T25 663 aa9.49□□□□□ -0.89
CDC27-216ENST00000574304 CNTNAP3Q9BZ76 1288 aa9.49□□□□□ -0.89
CDC27-216ENST00000574304 UBAP2LQ14157 1087 aaKnown RBP9.48□□□□□ -0.89
CDC27-216ENST00000574304 C1orf53Q5VUE5 145 aa9.48□□□□□ -0.89
CDC27-216ENST00000574304 NLRP8Q86W28 1048 aa9.48□□□□□ -0.89
CDC27-216ENST00000574304 PHACTR1Q9C0D0 580 aa9.48□□□□□ -0.89
CDC27-216ENST00000574304 GAS6Q14393 721 aa9.47□□□□□ -0.89
CDC27-216ENST00000574304 RHPN1Q8TCX5 695 aa9.47□□□□□ -0.89
CDC27-216ENST00000574304 PRIMPOLQ96LW4 560 aa9.47□□□□□ -0.89
CDC27-216ENST00000574304 GJA3Q9Y6H8 435 aa9.47□□□□□ -0.89
CDC27-216ENST00000574304 FOXO3O43524 673 aa9.46□□□□□ -0.9
CDC27-216ENST00000574304 FIGNL1Q6PIW4 674 aa9.46□□□□□ -0.9
CDC27-216ENST00000574304 C7orf43Q8WVR3 580 aa9.46□□□□□ -0.9
CDC27-216ENST00000574304 GPC6Q9Y625 555 aaPredicted RBP9.46□□□□□ -0.9
CDC27-216ENST00000574304 PRMT3O60678 531 aa9.45□□□□□ -0.9
CDC27-216ENST00000574304 ALDH16A1Q8IZ83 802 aa9.45□□□□□ -0.9
CDC27-216ENST00000574304 NGLY1Q96IV0 654 aa9.45□□□□□ -0.9
CDC27-216ENST00000574304 CFHR5Q9BXR6 569 aa9.45□□□□□ -0.9
CDC27-216ENST00000574304 ZCCHC2Q9C0B9 1178 aaKnown RBP9.45□□□□□ -0.9
CDC27-216ENST00000574304 PHF24Q9UPV7 400 aa9.45□□□□□ -0.9
CDC27-216ENST00000574304 INSM1Q01101 510 aaPredicted RBP9.44□□□□□ -0.9
CDC27-216ENST00000574304 OCLNQ16625 522 aa9.44□□□□□ -0.9
CDC27-216ENST00000574304 LRRC69Q6ZNQ3 347 aa9.44□□□□□ -0.9
CDC27-216ENST00000574304 VTI1AQ96AJ9 217 aa9.44□□□□□ -0.9
CDC27-216ENST00000574304 NEUROD4Q9HD90 331 aa9.44□□□□□ -0.9
CDC27-216ENST00000574304 PCDHGC4Q9Y5F7 938 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms