RNA–Protein interactions for RNA: ENST00000573710.7

CACNA1A-202, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-202ENST00000573710 CWC25Q9NXE8 425 aaPredicted RBP18.33■□□□□ 0.53
CACNA1A-202ENST00000573710 NOL3O60936 208 aaKnown RBP18.33■□□□□ 0.52
CACNA1A-202ENST00000573710 CTR9Q6PD62 1173 aa18.33■□□□□ 0.52
CACNA1A-202ENST00000573710 RAB3GAP2Q9H2M9 1393 aa18.33■□□□□ 0.52
CACNA1A-202ENST00000573710 UACAQ9BZF9 1416 aa18.33■□□□□ 0.52
CACNA1A-202ENST00000573710 FAM160A1Q05DH4 1040 aa18.33■□□□□ 0.52
CACNA1A-202ENST00000573710 ZBTB16Q05516 673 aa18.32■□□□□ 0.52
CACNA1A-202ENST00000573710 IRX5P78411 483 aaPredicted RBP18.32■□□□□ 0.52
CACNA1A-202ENST00000573710 IMMTQ16891 758 aaKnown RBP18.32■□□□□ 0.52
CACNA1A-202ENST00000573710 UTP14AQ9BVJ6 771 aaKnown RBP18.32■□□□□ 0.52
CACNA1A-202ENST00000573710 KRT85P78386 507 aa18.32■□□□□ 0.52
CACNA1A-202ENST00000573710 RSPH3Q86UC2 560 aa18.32■□□□□ 0.52
CACNA1A-202ENST00000573710 CAVIN4Q5BKX8 364 aa18.32■□□□□ 0.52
CACNA1A-202ENST00000573710 CECR2Q9BXF3 1484 aa18.31■□□□□ 0.52
CACNA1A-202ENST00000573710 BTBD11A6QL63 1104 aa18.31■□□□□ 0.52
CACNA1A-202ENST00000573710 MRE11P49959 708 aa18.31■□□□□ 0.52
CACNA1A-202ENST00000573710 CEP135Q66GS9 1140 aa18.31■□□□□ 0.52
CACNA1A-202ENST00000573710 NOP9Q86U38 636 aaKnown RBP18.31■□□□□ 0.52
CACNA1A-202ENST00000573710 CGNQ9P2M7 1197 aaKnown RBP18.31■□□□□ 0.52
CACNA1A-202ENST00000573710 SMIM23A6NLE4 172 aa18.31■□□□□ 0.52
CACNA1A-202ENST00000573710 C6orf229H3BNL8 230 aa18.31■□□□□ 0.52
CACNA1A-202ENST00000573710 ANAPC4Q9UJX5 808 aa18.31■□□□□ 0.52
CACNA1A-202ENST00000573710 TDRD9Q8NDG6 1382 aaKnown RBP18.31■□□□□ 0.52
CACNA1A-202ENST00000573710 MYO1BO43795 1136 aa18.31■□□□□ 0.52
CACNA1A-202ENST00000573710 GNAI3P08754 354 aa18.31■□□□□ 0.52
CACNA1A-202ENST00000573710 ZSWIM4Q9H7M6 989 aa18.31■□□□□ 0.52
CACNA1A-202ENST00000573710 ANKRD1Q15327 319 aa18.31■□□□□ 0.52
CACNA1A-202ENST00000573710 GTF2F1P35269 517 aaKnown RBP eCLIP18.3■□□□□ 0.52
CACNA1A-202ENST00000573710 RNF216Q9NWF9 866 aaPredicted RBP18.3■□□□□ 0.52
CACNA1A-202ENST00000573710 TAOK3Q9H2K8 898 aa18.3■□□□□ 0.52
CACNA1A-202ENST00000573710 CEP131Q9UPN4 1083 aa18.3■□□□□ 0.52
CACNA1A-202ENST00000573710 PSMD6Q15008 389 aa18.3■□□□□ 0.52
CACNA1A-202ENST00000573710 NOB1Q9ULX3 412 aaKnown RBP18.3■□□□□ 0.52
CACNA1A-202ENST00000573710 ACTN2P35609 894 aa18.29■□□□□ 0.52
CACNA1A-202ENST00000573710 SREK1Q8WXA9 508 aaKnown RBP18.29■□□□□ 0.52
CACNA1A-202ENST00000573710 BLOC1S2Q6QNY1 142 aa18.29■□□□□ 0.52
CACNA1A-202ENST00000573710 MAP9Q49MG5 647 aa18.29■□□□□ 0.52
CACNA1A-202ENST00000573710 PDRG1Q9NUG6 133 aa18.29■□□□□ 0.52
CACNA1A-202ENST00000573710 PDIA4P13667 645 aaKnown RBP18.29■□□□□ 0.52
CACNA1A-202ENST00000573710 SNX16P57768 344 aa18.29■□□□□ 0.52
CACNA1A-202ENST00000573710 IL27Q8NEV9 243 aa18.29■□□□□ 0.52
CACNA1A-202ENST00000573710 CCDC65Q8IXS2 484 aa18.29■□□□□ 0.52
CACNA1A-202ENST00000573710 RFC1P35251 1148 aaPredicted RBP18.28■□□□□ 0.52
CACNA1A-202ENST00000573710 NACADO15069 1562 aa18.28■□□□□ 0.52
CACNA1A-202ENST00000573710 ARID4AP29374 1257 aaPredicted RBP18.28■□□□□ 0.52
CACNA1A-202ENST00000573710 PRPF31Q8WWY3 499 aaKnown RBP18.28■□□□□ 0.52
CACNA1A-202ENST00000573710 IQCGQ9H095 443 aaKnown RBP18.28■□□□□ 0.52
CACNA1A-202ENST00000573710 RBM28Q9NW13 759 aaKnown RBP18.28■□□□□ 0.52
CACNA1A-202ENST00000573710 KIF3CO14782 793 aa18.28■□□□□ 0.52
CACNA1A-202ENST00000573710 IL1RAPL2Q9NP60 686 aa18.28■□□□□ 0.52
CACNA1A-202ENST00000573710 PRDM11Q9NQV5 511 aa18.28■□□□□ 0.52
CACNA1A-202ENST00000573710 MNAT1P51948 309 aa18.28■□□□□ 0.52
CACNA1A-202ENST00000573710 ZNF287Q9HBT7 754 aa18.28■□□□□ 0.52
CACNA1A-202ENST00000573710 PPARDQ03181 441 aa18.28■□□□□ 0.52
CACNA1A-202ENST00000573710 SPG7Q9UQ90 795 aa18.28■□□□□ 0.52
CACNA1A-202ENST00000573710 CASTP20810 708 aaKnown RBP18.27■□□□□ 0.52
CACNA1A-202ENST00000573710 TCHPQ9BT92 498 aa18.27■□□□□ 0.52
CACNA1A-202ENST00000573710 CEP126Q9P2H0 1117 aa18.27■□□□□ 0.52
CACNA1A-202ENST00000573710 PHACTR2O75167 634 aa18.27■□□□□ 0.52
CACNA1A-202ENST00000573710 PDCL2Q8N4E4 241 aa18.27■□□□□ 0.52
CACNA1A-202ENST00000573710 ZC3H6P61129 1189 aaKnown RBP18.27■□□□□ 0.52
CACNA1A-202ENST00000573710 GAS2L2Q8NHY3 880 aa18.27■□□□□ 0.52
CACNA1A-202ENST00000573710 ZNF530Q6P9A1 599 aaPredicted RBP18.27■□□□□ 0.51
CACNA1A-202ENST00000573710 CCDC170Q8IYT3 715 aa18.27■□□□□ 0.51
CACNA1A-202ENST00000573710 GSTA5Q7RTV2 222 aa18.26■□□□□ 0.51
CACNA1A-202ENST00000573710 GBP7Q8N8V2 638 aaPredicted RBP18.26■□□□□ 0.51
CACNA1A-202ENST00000573710 CLSTN2Q9H4D0 955 aa18.26■□□□□ 0.51
CACNA1A-202ENST00000573710 HYPKQ9NX55 129 aa18.26■□□□□ 0.51
CACNA1A-202ENST00000573710 TMEM266Q2M3C6 531 aa18.26■□□□□ 0.51
CACNA1A-202ENST00000573710 SEPT8Q92599 483 aa18.26■□□□□ 0.51
CACNA1A-202ENST00000573710 CRCPO75575 148 aa18.26■□□□□ 0.51
CACNA1A-202ENST00000573710 MBD3O95983 291 aa18.26■□□□□ 0.51
CACNA1A-202ENST00000573710 EHMT1Q9H9B1 1298 aa18.26■□□□□ 0.51
CACNA1A-202ENST00000573710 CCDC89Q8N998 374 aa18.26■□□□□ 0.51
CACNA1A-202ENST00000573710 SMTNL1A8MU46 457 aa18.26■□□□□ 0.51
CACNA1A-202ENST00000573710 MPRIPQ6WCQ1 1025 aa18.26■□□□□ 0.51
CACNA1A-202ENST00000573710 LRRC45Q96CN5 670 aa18.26■□□□□ 0.51
CACNA1A-202ENST00000573710 NUP62CLQ9H1M0 184 aa18.26■□□□□ 0.51
CACNA1A-202ENST00000573710 PPFIA3O75145 1194 aa18.25■□□□□ 0.51
CACNA1A-202ENST00000573710 ALS2CR12Q96Q35 445 aa18.25■□□□□ 0.51
CACNA1A-202ENST00000573710 MTIF2P46199 727 aaKnown RBP18.25■□□□□ 0.51
CACNA1A-202ENST00000573710 CUL4BQ13620 913 aa18.25■□□□□ 0.51
CACNA1A-202ENST00000573710 CEP120Q8N960 986 aa18.25■□□□□ 0.51
CACNA1A-202ENST00000573710 JADE2Q9NQC1 790 aa18.25■□□□□ 0.51
CACNA1A-202ENST00000573710 F8W031 263 aaPredicted RBP18.25■□□□□ 0.51
CACNA1A-202ENST00000573710 PAFAH1B1P43034 410 aa18.25■□□□□ 0.51
CACNA1A-202ENST00000573710 ZHX1Q9UKY1 873 aaPredicted RBP18.25■□□□□ 0.51
CACNA1A-202ENST00000573710 DIXDC1Q155Q3 683 aa18.24■□□□□ 0.51
CACNA1A-202ENST00000573710 SPECC1LQ69YQ0 1117 aa18.24■□□□□ 0.51
CACNA1A-202ENST00000573710 SRGAP3O43295 1099 aa18.24■□□□□ 0.51
CACNA1A-202ENST00000573710 RASA3Q14644 834 aa18.24■□□□□ 0.51
CACNA1A-202ENST00000573710 TWISTNBQ3B726 338 aaPredicted RBP18.24■□□□□ 0.51
CACNA1A-202ENST00000573710 ANKFY1Q9P2R3 1169 aa18.24■□□□□ 0.51
CACNA1A-202ENST00000573710 RBM26Q5T8P6 1007 aaKnown RBP18.24■□□□□ 0.51
CACNA1A-202ENST00000573710 NAPBQ9H115 298 aa18.24■□□□□ 0.51
CACNA1A-202ENST00000573710 PRKAR2BP31323 418 aa18.24■□□□□ 0.51
CACNA1A-202ENST00000573710 CCDC40Q4G0X9 1142 aa18.24■□□□□ 0.51
CACNA1A-202ENST00000573710 SULT6B1Q6IMI4 303 aa18.24■□□□□ 0.51
CACNA1A-202ENST00000573710 CCDC174Q6PII3 467 aa18.24■□□□□ 0.51
CACNA1A-202ENST00000573710 WASF1Q92558 559 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms