RNA–Protein interactions for RNA: ENST00000572603.1

RAB40B-207, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-207ENST00000572603 AMIGO3Q86WK7 504 aa28.68■■■□□ 2.18
RAB40B-207ENST00000572603 STK32BQ9NY57 414 aa28.68■■■□□ 2.18
RAB40B-207ENST00000572603 RC3H1Q5TC82 1133 aaKnown RBP28.67■■■□□ 2.18
RAB40B-207ENST00000572603 INTS5Q6P9B9 1019 aaKnown RBP28.67■■■□□ 2.18
RAB40B-207ENST00000572603 TEX13AQ9BXU3 409 aaPredicted RBP28.67■■■□□ 2.18
RAB40B-207ENST00000572603 NBPF14Q5TI25 921 aa28.66■■■□□ 2.18
RAB40B-207ENST00000572603 CDCA7LQ96GN5 454 aa28.66■■■□□ 2.18
RAB40B-207ENST00000572603 HMGB2P26583 209 aaKnown RBP28.65■■■□□ 2.18
RAB40B-207ENST00000572603 SLFN5Q08AF3 891 aa28.65■■■□□ 2.18
RAB40B-207ENST00000572603 AK7Q96M32 723 aa28.65■■■□□ 2.18
RAB40B-207ENST00000572603 MYH16Q9H6N6 1097 aa28.65■■■□□ 2.18
RAB40B-207ENST00000572603 E9PSI1 815 aa28.64■■■□□ 2.18
RAB40B-207ENST00000572603 C8orf58Q8NAV2 365 aa28.64■■■□□ 2.18
RAB40B-207ENST00000572603 CCDC87Q9NVE4 849 aa28.64■■■□□ 2.18
RAB40B-207ENST00000572603 ZBTB1Q9Y2K1 713 aa28.64■■■□□ 2.18
RAB40B-207ENST00000572603 STARD3NLO95772 234 aa28.63■■■□□ 2.17
RAB40B-207ENST00000572603 HOXB7P09629 217 aa28.63■■■□□ 2.17
RAB40B-207ENST00000572603 PNPLA7Q6ZV29 1317 aa28.63■■■□□ 2.17
RAB40B-207ENST00000572603 GNPATO15228 680 aa28.62■■■□□ 2.17
RAB40B-207ENST00000572603 DUSP27Q5VZP5 1158 aa28.62■■■□□ 2.17
RAB40B-207ENST00000572603 TRMT2AQ8IZ69 625 aaKnown RBP28.62■■■□□ 2.17
RAB40B-207ENST00000572603 R3HDM1Q15032 1099 aaKnown RBP28.61■■■□□ 2.17
RAB40B-207ENST00000572603 TSPYL6Q8N831 410 aa28.61■■■□□ 2.17
RAB40B-207ENST00000572603 SOS1Q07889 1333 aaPredicted RBP28.61■■■□□ 2.17
RAB40B-207ENST00000572603 A1BGP04217 495 aa28.6■■■□□ 2.17
RAB40B-207ENST00000572603 SMIM5Q71RC9 77 aa28.6■■■□□ 2.17
RAB40B-207ENST00000572603 SCN7AQ01118 1682 aa28.59■■■□□ 2.17
RAB40B-207ENST00000572603 RPS6KA4O75676 772 aa28.59■■■□□ 2.17
RAB40B-207ENST00000572603 TFCP2L1Q9NZI6 479 aa28.59■■■□□ 2.17
RAB40B-207ENST00000572603 BCORQ6W2J9 1755 aa28.59■■■□□ 2.17
RAB40B-207ENST00000572603 PSDA5PKW4 1024 aaPredicted RBP28.58■■■□□ 2.17
RAB40B-207ENST00000572603 NBPF26B4DH59 902 aa28.58■■■□□ 2.17
RAB40B-207ENST00000572603 EXOSC9Q06265 439 aaKnown RBP28.58■■■□□ 2.17
RAB40B-207ENST00000572603 NBPF10Q6P3W6 841 aaKnown RBP28.58■■■□□ 2.17
RAB40B-207ENST00000572603 NBPF15Q8N660 670 aa28.58■■■□□ 2.17
RAB40B-207ENST00000572603 COL24A1Q17RW2 1714 aa28.57■■■□□ 2.16
RAB40B-207ENST00000572603 SSFA2P28290 1259 aa28.57■■■□□ 2.16
RAB40B-207ENST00000572603 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.56■■■□□ 2.16
RAB40B-207ENST00000572603 ELL2O00472 640 aaPredicted RBP28.56■■■□□ 2.16
RAB40B-207ENST00000572603 COL15A1P39059 1388 aa28.56■■■□□ 2.16
RAB40B-207ENST00000572603 PIP4K2AP48426 406 aaPredicted RBP28.56■■■□□ 2.16
RAB40B-207ENST00000572603 ERBB4Q15303 1308 aa28.56■■■□□ 2.16
RAB40B-207ENST00000572603 PDGFDQ9GZP0 370 aaPredicted RBP28.56■■■□□ 2.16
RAB40B-207ENST00000572603 RTCBQ9Y3I0 505 aaKnown RBP28.56■■■□□ 2.16
RAB40B-207ENST00000572603 CANXP27824 592 aaKnown RBP28.55■■■□□ 2.16
RAB40B-207ENST00000572603 PHF14O94880 888 aa28.54■■■□□ 2.16
RAB40B-207ENST00000572603 EIF2S2P20042 333 aaKnown RBP28.54■■■□□ 2.16
RAB40B-207ENST00000572603 EIF5P55010 431 aaKnown RBP28.54■■■□□ 2.16
RAB40B-207ENST00000572603 PDIA6Q15084 440 aa28.54■■■□□ 2.16
RAB40B-207ENST00000572603 TWISTNBQ3B726 338 aaPredicted RBP28.54■■■□□ 2.16
RAB40B-207ENST00000572603 HDGFL1Q5TGJ6 251 aa28.54■■■□□ 2.16
RAB40B-207ENST00000572603 COL23A1Q86Y22 540 aaPredicted RBP28.54■■■□□ 2.16
RAB40B-207ENST00000572603 IL6STP40189 918 aaPredicted RBP28.53■■■□□ 2.16
RAB40B-207ENST00000572603 LRP10Q7Z4F1 713 aa28.53■■■□□ 2.16
RAB40B-207ENST00000572603 CACNA1FO60840 1977 aa28.53■■■□□ 2.16
RAB40B-207ENST00000572603 ADRA2BP18089 450 aa28.52■■■□□ 2.16
RAB40B-207ENST00000572603 NECTIN2Q92692 538 aa28.52■■■□□ 2.16
RAB40B-207ENST00000572603 VAMP4O75379 141 aa28.51■■■□□ 2.15
RAB40B-207ENST00000572603 PROSER3Q2NL68 480 aa28.51■■■□□ 2.15
RAB40B-207ENST00000572603 FLAD1Q8NFF5 587 aa28.51■■■□□ 2.15
RAB40B-207ENST00000572603 ARHGEF1Q92888 912 aaKnown RBP28.49■■■□□ 2.15
RAB40B-207ENST00000572603 CHPF2Q9P2E5 772 aa28.49■■■□□ 2.15
RAB40B-207ENST00000572603 ANXA1P04083 346 aa28.48■■■□□ 2.15
RAB40B-207ENST00000572603 TRAPPC3LQ5T215 181 aa28.47■■■□□ 2.15
RAB40B-207ENST00000572603 DDX21Q9NR30 783 aaKnown RBP eCLIP28.47■■■□□ 2.15
RAB40B-207ENST00000572603 USP42Q9H9J4 1324 aaKnown RBP28.46■■■□□ 2.15
RAB40B-207ENST00000572603 MYL6BP14649 208 aa28.46■■■□□ 2.15
RAB40B-207ENST00000572603 YTHDC1Q96MU7 727 aaKnown RBP28.46■■■□□ 2.15
RAB40B-207ENST00000572603 NUP98P52948 1817 aa28.44■■■□□ 2.14
RAB40B-207ENST00000572603 DBF4Q9UBU7 674 aaPredicted RBP28.44■■■□□ 2.14
RAB40B-207ENST00000572603 SRP68Q9UHB9 627 aaKnown RBP28.44■■■□□ 2.14
RAB40B-207ENST00000572603 ZNF330Q9Y3S2 320 aaPredicted RBP28.44■■■□□ 2.14
RAB40B-207ENST00000572603 ARFGEF2Q9Y6D5 1785 aa28.43■■■□□ 2.14
RAB40B-207ENST00000572603 CCDC30Q5VVM6 783 aa28.43■■■□□ 2.14
RAB40B-207ENST00000572603 A0A087WZG4 1122 aa28.42■■■□□ 2.14
RAB40B-207ENST00000572603 NARFQ9UHQ1 456 aa28.42■■■□□ 2.14
RAB40B-207ENST00000572603 ANKRD36CQ5JPF3 1778 aa28.42■■■□□ 2.14
RAB40B-207ENST00000572603 TCERG1O14776 1098 aaKnown RBP28.41■■■□□ 2.14
RAB40B-207ENST00000572603 RFC4P35249 363 aa28.41■■■□□ 2.14
RAB40B-207ENST00000572603 MSH5O43196 834 aa28.4■■■□□ 2.14
RAB40B-207ENST00000572603 CAMTA2O94983 1202 aa28.4■■■□□ 2.14
RAB40B-207ENST00000572603 TTLL7Q6ZT98 887 aa28.4■■■□□ 2.14
RAB40B-207ENST00000572603 DZIP3Q86Y13 1208 aaKnown RBP28.4■■■□□ 2.14
RAB40B-207ENST00000572603 SLC16A10Q8TF71 515 aa28.4■■■□□ 2.14
RAB40B-207ENST00000572603 BCL2L12Q9HB09 334 aa28.4■■■□□ 2.14
RAB40B-207ENST00000572603 TBC1D2BQ9UPU7 963 aa28.4■■■□□ 2.14
RAB40B-207ENST00000572603 GYS1P13807 737 aa28.39■■■□□ 2.14
RAB40B-207ENST00000572603 CHMP4AQ9BY43 222 aa28.39■■■□□ 2.14
RAB40B-207ENST00000572603 ZBTB7AO95365 584 aa28.38■■■□□ 2.13
RAB40B-207ENST00000572603 CT47B1P0C2W7 299 aaPredicted RBP28.38■■■□□ 2.13
RAB40B-207ENST00000572603 USPL1Q5W0Q7 1092 aa28.38■■■□□ 2.13
RAB40B-207ENST00000572603 XAGE3Q8WTP9 111 aa28.38■■■□□ 2.13
RAB40B-207ENST00000572603 HYPKQ9NX55 129 aa28.38■■■□□ 2.13
RAB40B-207ENST00000572603 LRP5O75197 1615 aa28.38■■■□□ 2.13
RAB40B-207ENST00000572603 MTFR1LQ9H019 292 aa28.37■■■□□ 2.13
RAB40B-207ENST00000572603 STK31Q9BXU1 1019 aa28.36■■■□□ 2.13
RAB40B-207ENST00000572603 PHAXQ9H814 394 aaKnown RBP28.36■■■□□ 2.13
RAB40B-207ENST00000572603 MAP3K15Q6ZN16 1313 aa28.36■■■□□ 2.13
RAB40B-207ENST00000572603 MSL1Q68DK7 614 aa28.35■■■□□ 2.13
RAB40B-207ENST00000572603 COPS6Q7L5N1 327 aa28.35■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms