RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 KCNQ3O43525 872 aa11.6□□□□□ -0.55
SMG6-210ENST00000572205 SSFA2P28290 1259 aa11.6□□□□□ -0.55
SMG6-210ENST00000572205 ATP6V1AP38606 617 aa11.6□□□□□ -0.55
SMG6-210ENST00000572205 DCTN1Q14203 1278 aa11.6□□□□□ -0.55
SMG6-210ENST00000572205 MCM10Q7L590 875 aa11.6□□□□□ -0.55
SMG6-210ENST00000572205 TFCP2L1Q9NZI6 479 aa11.6□□□□□ -0.55
SMG6-210ENST00000572205 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.59□□□□□ -0.55
SMG6-210ENST00000572205 PTCD1O75127 700 aaKnown RBP11.59□□□□□ -0.55
SMG6-210ENST00000572205 RC3H1Q5TC82 1133 aaKnown RBP11.59□□□□□ -0.55
SMG6-210ENST00000572205 INTS5Q6P9B9 1019 aaKnown RBP11.59□□□□□ -0.55
SMG6-210ENST00000572205 DNAJC10Q8IXB1 793 aa11.59□□□□□ -0.55
SMG6-210ENST00000572205 SLC16A10Q8TF71 515 aa11.59□□□□□ -0.55
SMG6-210ENST00000572205 ZNF496Q96IT1 587 aaPredicted RBP11.59□□□□□ -0.55
SMG6-210ENST00000572205 ANKRD36CQ5JPF3 1778 aa11.59□□□□□ -0.55
SMG6-210ENST00000572205 SOS1Q07889 1333 aaPredicted RBP11.59□□□□□ -0.55
SMG6-210ENST00000572205 GNPATO15228 680 aa11.58□□□□□ -0.56
SMG6-210ENST00000572205 CYP19A1P11511 503 aaPredicted RBP11.58□□□□□ -0.56
SMG6-210ENST00000572205 CRKLP46109 303 aaKnown RBP11.58□□□□□ -0.56
SMG6-210ENST00000572205 NFE2L2Q16236 605 aa11.58□□□□□ -0.56
SMG6-210ENST00000572205 ZNF790Q6PG37 636 aa11.58□□□□□ -0.56
SMG6-210ENST00000572205 C10orf71Q711Q0 1435 aa11.58□□□□□ -0.56
SMG6-210ENST00000572205 NUP98P52948 1817 aa11.58□□□□□ -0.56
SMG6-210ENST00000572205 CHD4Q14839 1912 aa11.57□□□□□ -0.56
SMG6-210ENST00000572205 HTATSF1O43719 755 aaKnown RBP11.57□□□□□ -0.56
SMG6-210ENST00000572205 AK7Q96M32 723 aa11.57□□□□□ -0.56
SMG6-210ENST00000572205 RBM42Q9BTD8 480 aaKnown RBP11.57□□□□□ -0.56
SMG6-210ENST00000572205 THUMPD2Q9BTF0 503 aaKnown RBP11.57□□□□□ -0.56
SMG6-210ENST00000572205 ARFGEF1Q9Y6D6 1849 aa11.57□□□□□ -0.56
SMG6-210ENST00000572205 ARFGEF2Q9Y6D5 1785 aa11.56□□□□□ -0.56
SMG6-210ENST00000572205 COL15A1P39059 1388 aa11.56□□□□□ -0.56
SMG6-210ENST00000572205 PRAMEF22A3QJZ6 481 aa11.56□□□□□ -0.56
SMG6-210ENST00000572205 RPS6KA4O75676 772 aa11.56□□□□□ -0.56
SMG6-210ENST00000572205 ADAMTS8Q9UP79 889 aa11.56□□□□□ -0.56
SMG6-210ENST00000572205 ZBTB1Q9Y2K1 713 aa11.56□□□□□ -0.56
SMG6-210ENST00000572205 USP42Q9H9J4 1324 aaKnown RBP11.56□□□□□ -0.56
SMG6-210ENST00000572205 PHF14O94880 888 aa11.55□□□□□ -0.56
SMG6-210ENST00000572205 MSL1Q68DK7 614 aa11.55□□□□□ -0.56
SMG6-210ENST00000572205 FHDC1Q9C0D6 1143 aaPredicted RBP11.55□□□□□ -0.56
SMG6-210ENST00000572205 TSHZ2Q9NRE2 1034 aa11.55□□□□□ -0.56
SMG6-210ENST00000572205 TRIM35Q9UPQ4 493 aa11.55□□□□□ -0.56
SMG6-210ENST00000572205 PXDNLA1KZ92 1463 aa11.55□□□□□ -0.56
SMG6-210ENST00000572205 TNRC6CQ9HCJ0 1690 aaKnown RBP11.55□□□□□ -0.56
SMG6-210ENST00000572205 ABCB7O75027 752 aa11.54□□□□□ -0.56
SMG6-210ENST00000572205 GYS1P13807 737 aa11.54□□□□□ -0.56
SMG6-210ENST00000572205 TMPOP42166 694 aaKnown RBP11.54□□□□□ -0.56
SMG6-210ENST00000572205 TEFQ10587 303 aa11.54□□□□□ -0.56
SMG6-210ENST00000572205 CCDC146Q8IYE0 955 aa11.54□□□□□ -0.56
SMG6-210ENST00000572205 ARHGEF1Q92888 912 aaKnown RBP11.54□□□□□ -0.56
SMG6-210ENST00000572205 BCL2L12Q9HB09 334 aa11.54□□□□□ -0.56
SMG6-210ENST00000572205 FLAD1Q8NFF5 587 aa11.53□□□□□ -0.56
SMG6-210ENST00000572205 ARXQ96QS3 562 aa11.53□□□□□ -0.56
SMG6-210ENST00000572205 CCDC87Q9NVE4 849 aa11.53□□□□□ -0.56
SMG6-210ENST00000572205 ZBTB12Q9Y330 459 aaPredicted RBP11.53□□□□□ -0.56
SMG6-210ENST00000572205 BTBD11A6QL63 1104 aa11.52□□□□□ -0.57
SMG6-210ENST00000572205 EIF5P55010 431 aaKnown RBP11.52□□□□□ -0.57
SMG6-210ENST00000572205 NLGN2Q8NFZ4 835 aa11.52□□□□□ -0.57
SMG6-210ENST00000572205 SYT17Q9BSW7 474 aa11.52□□□□□ -0.57
SMG6-210ENST00000572205 SRP68Q9UHB9 627 aaKnown RBP11.52□□□□□ -0.57
SMG6-210ENST00000572205 CACNA1SQ13698 1873 aa11.52□□□□□ -0.57
SMG6-210ENST00000572205 DDR1Q08345 913 aa11.51□□□□□ -0.57
SMG6-210ENST00000572205 PNISRQ8TF01 805 aaKnown RBP11.51□□□□□ -0.57
SMG6-210ENST00000572205 RUNDC1Q96C34 613 aa11.51□□□□□ -0.57
SMG6-210ENST00000572205 RNF39Q9H2S5 420 aa11.51□□□□□ -0.57
SMG6-210ENST00000572205 RTCBQ9Y3I0 505 aaKnown RBP11.51□□□□□ -0.57
SMG6-210ENST00000572205 MAPK8IP3Q9UPT6 1336 aa11.51□□□□□ -0.57
SMG6-210ENST00000572205 LAMB2P55268 1798 aa11.51□□□□□ -0.57
SMG6-210ENST00000572205 NBPF26B4DH59 902 aa11.5□□□□□ -0.57
SMG6-210ENST00000572205 NBPF10Q6P3W6 841 aaKnown RBP11.5□□□□□ -0.57
SMG6-210ENST00000572205 LRP10Q7Z4F1 713 aa11.5□□□□□ -0.57
SMG6-210ENST00000572205 NBPF15Q8N660 670 aa11.5□□□□□ -0.57
SMG6-210ENST00000572205 FMNL2Q96PY5 1086 aa11.5□□□□□ -0.57
SMG6-210ENST00000572205 MIS18AQ9NYP9 233 aa11.5□□□□□ -0.57
SMG6-210ENST00000572205 RRP7AQ9Y3A4 280 aaKnown RBP11.5□□□□□ -0.57
SMG6-210ENST00000572205 USP16Q9Y5T5 823 aa11.5□□□□□ -0.57
SMG6-210ENST00000572205 CARMIL3Q8ND23 1372 aa11.5□□□□□ -0.57
SMG6-210ENST00000572205 HMGB2P26583 209 aaKnown RBP11.49□□□□□ -0.57
SMG6-210ENST00000572205 EIF4A1P60842 406 aaKnown RBP11.49□□□□□ -0.57
SMG6-210ENST00000572205 TAF7Q15545 349 aaPredicted RBP11.49□□□□□ -0.57
SMG6-210ENST00000572205 TTC5Q8N0Z6 440 aa11.49□□□□□ -0.57
SMG6-210ENST00000572205 SPRYD3Q8NCJ5 442 aa11.49□□□□□ -0.57
SMG6-210ENST00000572205 A1BGP04217 495 aa11.48□□□□□ -0.57
SMG6-210ENST00000572205 MMP10P09238 476 aa11.48□□□□□ -0.57
SMG6-210ENST00000572205 ZNF853P0CG23 659 aa11.48□□□□□ -0.57
SMG6-210ENST00000572205 RIPK4P57078 832 aa11.48□□□□□ -0.57
SMG6-210ENST00000572205 TRAPPC3LQ5T215 181 aa11.48□□□□□ -0.57
SMG6-210ENST00000572205 RTF1Q92541 710 aaKnown RBP11.48□□□□□ -0.57
SMG6-210ENST00000572205 DDX60Q8IY21 1712 aaKnown RBP11.47□□□□□ -0.57
SMG6-210ENST00000572205 POLRMTO00411 1230 aaKnown RBP11.47□□□□□ -0.57
SMG6-210ENST00000572205 GIGYF1O75420 1035 aaPredicted RBP11.47□□□□□ -0.57
SMG6-210ENST00000572205 TM4SF1P30408 202 aa11.47□□□□□ -0.57
SMG6-210ENST00000572205 PIP4K2AP48426 406 aaPredicted RBP11.47□□□□□ -0.57
SMG6-210ENST00000572205 WDR43Q15061 677 aaKnown RBP eCLIP11.47□□□□□ -0.57
SMG6-210ENST00000572205 PLCD3Q8N3E9 789 aa11.47□□□□□ -0.57
SMG6-210ENST00000572205 PPP1R1BQ9UD71 204 aaPredicted RBP11.47□□□□□ -0.57
SMG6-210ENST00000572205 NARFQ9UHQ1 456 aa11.47□□□□□ -0.57
SMG6-210ENST00000572205 SBF1O95248 1867 aa11.46□□□□□ -0.57
SMG6-210ENST00000572205 CHL1O00533 1208 aa11.46□□□□□ -0.57
SMG6-210ENST00000572205 CAMTA2O94983 1202 aa11.46□□□□□ -0.57
SMG6-210ENST00000572205 POLD1P28340 1107 aa11.46□□□□□ -0.57
SMG6-210ENST00000572205 IL6STP40189 918 aaPredicted RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms