RNA–Protein interactions for RNA: ENST00000571932.2

CLDN7-205, Transcript of claudin 7, humanhuman

TSL 3

Gene CLDN7, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN7-205ENST00000571932 RPS6KA4O75676 772 aa23.28■■□□□ 1.32
CLDN7-205ENST00000571932 EIF4A1P60842 406 aaKnown RBP23.28■■□□□ 1.32
CLDN7-205ENST00000571932 WDR63Q8IWG1 891 aa23.28■■□□□ 1.32
CLDN7-205ENST00000571932 MSH5O43196 834 aa23.27■■□□□ 1.32
CLDN7-205ENST00000571932 ADRA2BP18089 450 aa23.27■■□□□ 1.32
CLDN7-205ENST00000571932 INTS5Q6P9B9 1019 aaKnown RBP23.27■■□□□ 1.32
CLDN7-205ENST00000571932 COL23A1Q86Y22 540 aaPredicted RBP23.27■■□□□ 1.32
CLDN7-205ENST00000571932 PHF14O94880 888 aa23.26■■□□□ 1.31
CLDN7-205ENST00000571932 ZNF853P0CG23 659 aa23.26■■□□□ 1.31
CLDN7-205ENST00000571932 MTFR1LQ9H019 292 aa23.26■■□□□ 1.31
CLDN7-205ENST00000571932 SPON1Q9HCB6 807 aa23.26■■□□□ 1.31
CLDN7-205ENST00000571932 TRAPPC3LQ5T215 181 aa23.25■■□□□ 1.31
CLDN7-205ENST00000571932 AMIGO3Q86WK7 504 aa23.25■■□□□ 1.31
CLDN7-205ENST00000571932 IL16Q14005 1332 aa23.25■■□□□ 1.31
CLDN7-205ENST00000571932 MYH14Q7Z406 1995 aaKnown RBP23.25■■□□□ 1.31
CLDN7-205ENST00000571932 ZBTB7AO95365 584 aa23.24■■□□□ 1.31
CLDN7-205ENST00000571932 MBIPQ9NS73 344 aa23.24■■□□□ 1.31
CLDN7-205ENST00000571932 GIGYF1O75420 1035 aaPredicted RBP23.23■■□□□ 1.31
CLDN7-205ENST00000571932 USP16Q9Y5T5 823 aa23.23■■□□□ 1.31
CLDN7-205ENST00000571932 LRP5O75197 1615 aa23.22■■□□□ 1.31
CLDN7-205ENST00000571932 ZBTB1Q9Y2K1 713 aa23.22■■□□□ 1.31
CLDN7-205ENST00000571932 SMIM5Q71RC9 77 aa23.21■■□□□ 1.31
CLDN7-205ENST00000571932 SOS1Q07889 1333 aaPredicted RBP23.21■■□□□ 1.31
CLDN7-205ENST00000571932 PRAMEF22A3QJZ6 481 aa23.2■■□□□ 1.3
CLDN7-205ENST00000571932 CANXP27824 592 aaKnown RBP23.2■■□□□ 1.3
CLDN7-205ENST00000571932 RFC4P35249 363 aa23.2■■□□□ 1.3
CLDN7-205ENST00000571932 ARHGEF1Q92888 912 aaKnown RBP23.2■■□□□ 1.3
CLDN7-205ENST00000571932 NPM2Q86SE8 214 aaKnown RBP23.19■■□□□ 1.3
CLDN7-205ENST00000571932 ATF5Q9Y2D1 282 aaPredicted RBP23.19■■□□□ 1.3
CLDN7-205ENST00000571932 LAMB4A4D0S4 1761 aa23.19■■□□□ 1.3
CLDN7-205ENST00000571932 A1BGP04217 495 aa23.18■■□□□ 1.3
CLDN7-205ENST00000571932 IL6STP40189 918 aaPredicted RBP23.18■■□□□ 1.3
CLDN7-205ENST00000571932 COL15A1P39059 1388 aa23.17■■□□□ 1.3
CLDN7-205ENST00000571932 EIF5P55010 431 aaKnown RBP23.17■■□□□ 1.3
CLDN7-205ENST00000571932 MYH16Q9H6N6 1097 aa23.17■■□□□ 1.3
CLDN7-205ENST00000571932 A0A087WZG4 1122 aa23.16■■□□□ 1.3
CLDN7-205ENST00000571932 EIF2S2P20042 333 aaKnown RBP23.16■■□□□ 1.3
CLDN7-205ENST00000571932 HNRNPUQ00839 825 aaKnown RBP eCLIP23.16■■□□□ 1.3
CLDN7-205ENST00000571932 GOLGA2Q08379 1002 aa23.16■■□□□ 1.3
CLDN7-205ENST00000571932 TSR2Q969E8 191 aaKnown RBP23.16■■□□□ 1.3
CLDN7-205ENST00000571932 ZNF521Q96K83 1311 aa23.15■■□□□ 1.3
CLDN7-205ENST00000571932 HOXB7P09629 217 aa23.15■■□□□ 1.3
CLDN7-205ENST00000571932 POLD1P28340 1107 aa23.15■■□□□ 1.3
CLDN7-205ENST00000571932 PTGER2P43116 358 aa23.15■■□□□ 1.3
CLDN7-205ENST00000571932 KRT24Q2M2I5 525 aa23.15■■□□□ 1.3
CLDN7-205ENST00000571932 DUSP27Q5VZP5 1158 aa23.15■■□□□ 1.3
CLDN7-205ENST00000571932 ERBB4Q15303 1308 aa23.14■■□□□ 1.3
CLDN7-205ENST00000571932 USP42Q9H9J4 1324 aaKnown RBP23.14■■□□□ 1.3
CLDN7-205ENST00000571932 C4AP0C0L4 1744 aa23.14■■□□□ 1.3
CLDN7-205ENST00000571932 SGIP1Q9BQI5 828 aa23.14■■□□□ 1.29
CLDN7-205ENST00000571932 CHMP4AQ9BY43 222 aa23.14■■□□□ 1.29
CLDN7-205ENST00000571932 COL24A1Q17RW2 1714 aa23.13■■□□□ 1.29
CLDN7-205ENST00000571932 ZPR1O75312 459 aa23.13■■□□□ 1.29
CLDN7-205ENST00000571932 NLGN1Q8N2Q7 840 aa23.13■■□□□ 1.29
CLDN7-205ENST00000571932 ZNF330Q9Y3S2 320 aaPredicted RBP23.13■■□□□ 1.29
CLDN7-205ENST00000571932 ELL2O00472 640 aaPredicted RBP23.12■■□□□ 1.29
CLDN7-205ENST00000571932 MSL1Q68DK7 614 aa23.12■■□□□ 1.29
CLDN7-205ENST00000571932 C8orf58Q8NAV2 365 aa23.12■■□□□ 1.29
CLDN7-205ENST00000571932 ARXQ96QS3 562 aa23.12■■□□□ 1.29
CLDN7-205ENST00000571932 PPP1R1BQ9UD71 204 aaPredicted RBP23.12■■□□□ 1.29
CLDN7-205ENST00000571932 NARFQ9UHQ1 456 aa23.12■■□□□ 1.29
CLDN7-205ENST00000571932 FANCIQ9NVI1 1328 aa23.11■■□□□ 1.29
CLDN7-205ENST00000571932 NBPF26B4DH59 902 aa23.11■■□□□ 1.29
CLDN7-205ENST00000571932 E9PSI1 815 aa23.11■■□□□ 1.29
CLDN7-205ENST00000571932 GYS1P13807 737 aa23.11■■□□□ 1.29
CLDN7-205ENST00000571932 NBPF10Q6P3W6 841 aaKnown RBP23.11■■□□□ 1.29
CLDN7-205ENST00000571932 NBPF15Q8N660 670 aa23.11■■□□□ 1.29
CLDN7-205ENST00000571932 SPINK5Q9NQ38 1064 aaPredicted RBP23.11■■□□□ 1.29
CLDN7-205ENST00000571932 PIP4K2AP48426 406 aaPredicted RBP23.1■■□□□ 1.29
CLDN7-205ENST00000571932 HDGFL1Q5TGJ6 251 aa23.1■■□□□ 1.29
CLDN7-205ENST00000571932 NECTIN2Q92692 538 aa23.1■■□□□ 1.29
CLDN7-205ENST00000571932 SRP68Q9UHB9 627 aaKnown RBP23.1■■□□□ 1.29
CLDN7-205ENST00000571932 MYL6BP14649 208 aa23.08■■□□□ 1.29
CLDN7-205ENST00000571932 USPL1Q5W0Q7 1092 aa23.08■■□□□ 1.29
CLDN7-205ENST00000571932 EXOSC9Q06265 439 aaKnown RBP23.07■■□□□ 1.28
CLDN7-205ENST00000571932 SLFN5Q08AF3 891 aa23.07■■□□□ 1.28
CLDN7-205ENST00000571932 TWISTNBQ3B726 338 aaPredicted RBP23.07■■□□□ 1.28
CLDN7-205ENST00000571932 DZIP3Q86Y13 1208 aaKnown RBP23.07■■□□□ 1.28
CLDN7-205ENST00000571932 TSPYL6Q8N831 410 aa23.07■■□□□ 1.28
CLDN7-205ENST00000571932 TBC1D2BQ9UPU7 963 aa23.06■■□□□ 1.28
CLDN7-205ENST00000571932 FKBP8Q14318 412 aa23.05■■□□□ 1.28
CLDN7-205ENST00000571932 CCDC30Q5VVM6 783 aa23.05■■□□□ 1.28
CLDN7-205ENST00000571932 CDCA7LQ96GN5 454 aa23.05■■□□□ 1.28
CLDN7-205ENST00000571932 DDX21Q9NR30 783 aaKnown RBP eCLIP23.05■■□□□ 1.28
CLDN7-205ENST00000571932 DBF4Q9UBU7 674 aaPredicted RBP23.05■■□□□ 1.28
CLDN7-205ENST00000571932 RGL2O15211 777 aa23.04■■□□□ 1.28
CLDN7-205ENST00000571932 MMP10P09238 476 aa23.04■■□□□ 1.28
CLDN7-205ENST00000571932 PDIA6Q15084 440 aa23.04■■□□□ 1.28
CLDN7-205ENST00000571932 SCN7AQ01118 1682 aa23.03■■□□□ 1.28
CLDN7-205ENST00000571932 SRCAPQ6ZRS2 3230 aa23.03■■□□□ 1.28
CLDN7-205ENST00000571932 CAMTA2O94983 1202 aa23.03■■□□□ 1.28
CLDN7-205ENST00000571932 BCL2L12Q9HB09 334 aa23.03■■□□□ 1.28
CLDN7-205ENST00000571932 CHPF2Q9P2E5 772 aa23.03■■□□□ 1.28
CLDN7-205ENST00000571932 HYPKQ9NX55 129 aa23.02■■□□□ 1.28
CLDN7-205ENST00000571932 ZNF652Q9Y2D9 606 aa23.02■■□□□ 1.28
CLDN7-205ENST00000571932 VAMP4O75379 141 aa23.01■■□□□ 1.27
CLDN7-205ENST00000571932 CLEC4GQ6UXB4 293 aa23.01■■□□□ 1.27
CLDN7-205ENST00000571932 KIF6Q6ZMV9 814 aa23.01■■□□□ 1.27
CLDN7-205ENST00000571932 STK31Q9BXU1 1019 aa23.01■■□□□ 1.27
CLDN7-205ENST00000571932 PARP3Q9Y6F1 533 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms