RNA–Protein interactions for RNA: ENST00000568744.1

CYLD-213, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 2

Gene CYLD, Length 370 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-213ENST00000568744 ARID4AP29374 1257 aaPredicted RBP10.38□□□□□ -0.75
CYLD-213ENST00000568744 PLA2G4AP47712 749 aa10.38□□□□□ -0.75
CYLD-213ENST00000568744 Q6ZNB5 142 aa10.38□□□□□ -0.75
CYLD-213ENST00000568744 LYSMD3Q7Z3D4 306 aa10.38□□□□□ -0.75
CYLD-213ENST00000568744 CRIPAKQ8N1N5 446 aa10.38□□□□□ -0.75
CYLD-213ENST00000568744 RNF217Q8TC41 542 aa10.38□□□□□ -0.75
CYLD-213ENST00000568744 NGLY1Q96IV0 654 aa10.38□□□□□ -0.75
CYLD-213ENST00000568744 IQSEC3Q9UPP2 1182 aaPredicted RBP10.38□□□□□ -0.75
CYLD-213ENST00000568744 RHOQP17081 205 aa10.37□□□□□ -0.75
CYLD-213ENST00000568744 POU4F2Q12837 409 aa10.37□□□□□ -0.75
CYLD-213ENST00000568744 NAA30Q147X3 362 aaPredicted RBP10.37□□□□□ -0.75
CYLD-213ENST00000568744 CCER1Q8TC90 406 aaPredicted RBP10.37□□□□□ -0.75
CYLD-213ENST00000568744 AIDAQ96BJ3 306 aa10.37□□□□□ -0.75
CYLD-213ENST00000568744 ABL1P00519 1130 aa10.36□□□□□ -0.75
CYLD-213ENST00000568744 NOS2P35228 1153 aa10.36□□□□□ -0.75
CYLD-213ENST00000568744 C4orf17Q53FE4 359 aa10.36□□□□□ -0.75
CYLD-213ENST00000568744 CAPN12Q6ZSI9 719 aa10.36□□□□□ -0.75
CYLD-213ENST00000568744 C1orf216Q8TAB5 229 aa10.36□□□□□ -0.75
CYLD-213ENST00000568744 L3MBTL2Q969R5 705 aa10.36□□□□□ -0.75
CYLD-213ENST00000568744 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.36□□□□□ -0.75
CYLD-213ENST00000568744 SEPT3Q9UH03 358 aa10.36□□□□□ -0.75
CYLD-213ENST00000568744 HCN4Q9Y3Q4 1203 aa10.36□□□□□ -0.75
CYLD-213ENST00000568744 SOS2Q07890 1332 aaPredicted RBP10.35□□□□□ -0.75
CYLD-213ENST00000568744 MAN1A2O60476 641 aa10.35□□□□□ -0.75
CYLD-213ENST00000568744 SH3PXD2AQ5TCZ1 1133 aa10.35□□□□□ -0.75
CYLD-213ENST00000568744 TAS1R3Q7RTX0 852 aa10.35□□□□□ -0.75
CYLD-213ENST00000568744 ZDHHC1Q8WTX9 485 aa10.35□□□□□ -0.75
CYLD-213ENST00000568744 C2orf49Q9BVC5 232 aaPredicted RBP10.35□□□□□ -0.75
CYLD-213ENST00000568744 GZF1Q9H116 711 aaPredicted RBP10.35□□□□□ -0.75
CYLD-213ENST00000568744 PTCD1O75127 700 aaKnown RBP10.34□□□□□ -0.75
CYLD-213ENST00000568744 TEAD4Q15561 434 aa10.34□□□□□ -0.75
CYLD-213ENST00000568744 SERPINB4P48594 390 aa10.33□□□□□ -0.76
CYLD-213ENST00000568744 NBPF10Q6P3W6 841 aaKnown RBP10.33□□□□□ -0.76
CYLD-213ENST00000568744 ANO2Q9NQ90 1003 aa10.33□□□□□ -0.76
CYLD-213ENST00000568744 SOBPA7XYQ1 873 aa10.32□□□□□ -0.76
CYLD-213ENST00000568744 SPATA31C2B4DYI2 1134 aa10.32□□□□□ -0.76
CYLD-213ENST00000568744 EML1O00423 815 aa10.32□□□□□ -0.76
CYLD-213ENST00000568744 TXNDC2Q86VQ3 553 aa10.32□□□□□ -0.76
CYLD-213ENST00000568744 STAG2Q8N3U4 1231 aa10.32□□□□□ -0.76
CYLD-213ENST00000568744 DNMT3LQ9UJW3 386 aa10.32□□□□□ -0.76
CYLD-213ENST00000568744 NBPF1Q3BBV0 1214 aa10.31□□□□□ -0.76
CYLD-213ENST00000568744 GTF3C2Q8WUA4 911 aaPredicted RBP10.31□□□□□ -0.76
CYLD-213ENST00000568744 PHACTR1Q9C0D0 580 aa10.31□□□□□ -0.76
CYLD-213ENST00000568744 TIMMDC1Q9NPL8 285 aa10.31□□□□□ -0.76
CYLD-213ENST00000568744 TXLNAP40222 546 aa10.3□□□□□ -0.76
CYLD-213ENST00000568744 ZNF211Q13398 564 aaPredicted RBP10.3□□□□□ -0.76
CYLD-213ENST00000568744 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.3□□□□□ -0.76
CYLD-213ENST00000568744 ALDH16A1Q8IZ83 802 aa10.3□□□□□ -0.76
CYLD-213ENST00000568744 GNEQ9Y223 722 aaKnown RBP10.3□□□□□ -0.76
CYLD-213ENST00000568744 TATP17735 454 aaPredicted RBP10.29□□□□□ -0.76
CYLD-213ENST00000568744 COL26A1Q96A83 441 aa10.29□□□□□ -0.76
CYLD-213ENST00000568744 SENP2Q9HC62 589 aa10.29□□□□□ -0.76
CYLD-213ENST00000568744 C16orf46Q6P387 395 aa10.28□□□□□ -0.76
CYLD-213ENST00000568744 BICDL1Q6ZP65 573 aa10.28□□□□□ -0.76
CYLD-213ENST00000568744 ZNF295-AS1Q8N0V1 137 aa10.28□□□□□ -0.76
CYLD-213ENST00000568744 GAS2L1Q99501 681 aaPredicted RBP10.28□□□□□ -0.76
CYLD-213ENST00000568744 SAP130Q9H0E3 1048 aa10.28□□□□□ -0.76
CYLD-213ENST00000568744 PODXL2Q9NZ53 605 aa10.28□□□□□ -0.76
CYLD-213ENST00000568744 GMPR2Q9P2T1 348 aaKnown RBP10.28□□□□□ -0.76
CYLD-213ENST00000568744 MTMR3Q13615 1198 aa10.27□□□□□ -0.77
CYLD-213ENST00000568744 RHPN1Q8TCX5 695 aa10.27□□□□□ -0.77
CYLD-213ENST00000568744 KIFC2Q96AC6 838 aa10.27□□□□□ -0.77
CYLD-213ENST00000568744 DNMT3AQ9Y6K1 912 aaPredicted RBP10.27□□□□□ -0.77
CYLD-213ENST00000568744 ARSJQ5FYB0 599 aaPredicted RBP10.26□□□□□ -0.77
CYLD-213ENST00000568744 WDR44Q5JSH3 913 aa10.26□□□□□ -0.77
CYLD-213ENST00000568744 QTRT2Q9H974 415 aaKnown RBP10.26□□□□□ -0.77
CYLD-213ENST00000568744 GPAMQ9HCL2 828 aa10.26□□□□□ -0.77
CYLD-213ENST00000568744 BIN2Q9UBW5 565 aaPredicted RBP10.26□□□□□ -0.77
CYLD-213ENST00000568744 H3BRB1 525 aa10.25□□□□□ -0.77
CYLD-213ENST00000568744 HIRAP54198 1017 aaPredicted RBP10.25□□□□□ -0.77
CYLD-213ENST00000568744 DGKZQ13574 1117 aa10.25□□□□□ -0.77
CYLD-213ENST00000568744 COX20Q5RI15 118 aa10.25□□□□□ -0.77
CYLD-213ENST00000568744 GLYCTKQ8IVS8 523 aa10.25□□□□□ -0.77
CYLD-213ENST00000568744 TUT1Q9H6E5 874 aaKnown RBP10.25□□□□□ -0.77
CYLD-213ENST00000568744 NEUROD4Q9HD90 331 aa10.25□□□□□ -0.77
CYLD-213ENST00000568744 A0A1B0GTH6 734 aa10.24□□□□□ -0.77
CYLD-213ENST00000568744 MSX1P28360 303 aa10.24□□□□□ -0.77
CYLD-213ENST00000568744 RTN1Q16799 776 aa10.24□□□□□ -0.77
CYLD-213ENST00000568744 TRIM47Q96LD4 638 aa10.24□□□□□ -0.77
CYLD-213ENST00000568744 ZDHHC3Q9NYG2 299 aa10.24□□□□□ -0.77
CYLD-213ENST00000568744 C11orf95C9JLR9 678 aaPredicted RBP10.23□□□□□ -0.77
CYLD-213ENST00000568744 C1orf53Q5VUE5 145 aa10.23□□□□□ -0.77
CYLD-213ENST00000568744 POTEAQ6S8J7 498 aa10.23□□□□□ -0.77
CYLD-213ENST00000568744 RIPOR1Q6ZS17 1223 aa10.23□□□□□ -0.77
CYLD-213ENST00000568744 HELQQ8TDG4 1101 aa10.23□□□□□ -0.77
CYLD-213ENST00000568744 KLK14Q9P0G3 267 aa10.23□□□□□ -0.77
CYLD-213ENST00000568744 GJA3Q9Y6H8 435 aa10.23□□□□□ -0.77
CYLD-213ENST00000568744 SOWAHDA6NJG2 315 aa10.22□□□□□ -0.77
CYLD-213ENST00000568744 SNRPBP14678 240 aaKnown RBP10.22□□□□□ -0.77
CYLD-213ENST00000568744 FKBP4Q02790 459 aaKnown RBP eCLIP10.22□□□□□ -0.77
CYLD-213ENST00000568744 PTSQ03393 145 aa10.22□□□□□ -0.77
CYLD-213ENST00000568744 PGBD3Q8N328 593 aa10.22□□□□□ -0.77
CYLD-213ENST00000568744 RUBCNLQ9H714 662 aa10.22□□□□□ -0.77
CYLD-213ENST00000568744 EGFL7Q9UHF1 273 aa10.22□□□□□ -0.77
CYLD-213ENST00000568744 LRFN2Q9ULH4 789 aa10.22□□□□□ -0.77
CYLD-213ENST00000568744 ICMTO60725 284 aa10.21□□□□□ -0.77
CYLD-213ENST00000568744 AAMPQ13685 434 aa10.21□□□□□ -0.77
CYLD-213ENST00000568744 C11orf91Q3C1V1 193 aa10.21□□□□□ -0.77
CYLD-213ENST00000568744 TMCO4Q5TGY1 634 aa10.21□□□□□ -0.77
CYLD-213ENST00000568744 MYO19Q96H55 970 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms