RNA–Protein interactions for RNA: ENST00000568673.5

TCF4-240, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 2,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-240ENST00000568673 L1TD1Q5T7N2 865 aaKnown RBP11.83□□□□□ -0.52
TCF4-240ENST00000568673 AOX1Q06278 1338 aa11.82□□□□□ -0.52
TCF4-240ENST00000568673 SURF6O75683 361 aaKnown RBP11.82□□□□□ -0.52
TCF4-240ENST00000568673 ESYT1Q9BSJ8 1104 aa11.82□□□□□ -0.52
TCF4-240ENST00000568673 KIF1AQ12756 1690 aa11.82□□□□□ -0.52
TCF4-240ENST00000568673 SRGAP3O43295 1099 aa11.82□□□□□ -0.52
TCF4-240ENST00000568673 ERBB3P21860 1342 aa11.81□□□□□ -0.52
TCF4-240ENST00000568673 CAMTA1Q9Y6Y1 1673 aa11.81□□□□□ -0.52
TCF4-240ENST00000568673 ADCY9O60503 1353 aa11.81□□□□□ -0.52
TCF4-240ENST00000568673 TRIM6-TRIM34B2RNG4 842 aa11.81□□□□□ -0.52
TCF4-240ENST00000568673 ANXA1P04083 346 aa11.81□□□□□ -0.52
TCF4-240ENST00000568673 PTMSP20962 102 aa11.81□□□□□ -0.52
TCF4-240ENST00000568673 CHMLP26374 656 aa11.81□□□□□ -0.52
TCF4-240ENST00000568673 CLEC17AQ6ZS10 378 aa11.81□□□□□ -0.52
TCF4-240ENST00000568673 IL1RAPL2Q9NP60 686 aa11.81□□□□□ -0.52
TCF4-240ENST00000568673 TUBGCP6Q96RT7 1819 aa11.81□□□□□ -0.52
TCF4-240ENST00000568673 RHPN1Q8TCX5 695 aa11.81□□□□□ -0.52
TCF4-240ENST00000568673 RILPL2Q969X0 211 aa11.81□□□□□ -0.52
TCF4-240ENST00000568673 GZF1Q9H116 711 aaPredicted RBP11.81□□□□□ -0.52
TCF4-240ENST00000568673 LMTK3Q96Q04 1460 aa11.8□□□□□ -0.52
TCF4-240ENST00000568673 FSD2A1L4K1 749 aa11.8□□□□□ -0.52
TCF4-240ENST00000568673 KIF1BPQ96EK5 621 aa11.8□□□□□ -0.52
TCF4-240ENST00000568673 GOLGA6L3A6NEY3 463 aa11.79□□□□□ -0.52
TCF4-240ENST00000568673 ALDH1L1O75891 902 aa11.79□□□□□ -0.52
TCF4-240ENST00000568673 ATF3P18847 181 aa11.79□□□□□ -0.52
TCF4-240ENST00000568673 ZC3H6P61129 1189 aaKnown RBP11.79□□□□□ -0.52
TCF4-240ENST00000568673 SKOR2Q2VWA4 1001 aaPredicted RBP11.79□□□□□ -0.52
TCF4-240ENST00000568673 HSP90AB4PQ58FF6 505 aa11.79□□□□□ -0.52
TCF4-240ENST00000568673 KSR2Q6VAB6 950 aa11.79□□□□□ -0.52
TCF4-240ENST00000568673 CWC22Q9HCG8 908 aaKnown RBP11.79□□□□□ -0.52
TCF4-240ENST00000568673 NUCB2P80303 420 aa11.79□□□□□ -0.52
TCF4-240ENST00000568673 MTX1Q13505 466 aa11.79□□□□□ -0.52
TCF4-240ENST00000568673 UNC5CLQ8IV45 518 aa11.79□□□□□ -0.52
TCF4-240ENST00000568673 HYPKQ9NX55 129 aa11.79□□□□□ -0.52
TCF4-240ENST00000568673 MAP3K2Q9Y2U5 619 aa11.79□□□□□ -0.52
TCF4-240ENST00000568673 EPB41L2O43491 1005 aaKnown RBP11.78□□□□□ -0.52
TCF4-240ENST00000568673 MCCP23508 829 aa11.78□□□□□ -0.52
TCF4-240ENST00000568673 SSFA2P28290 1259 aa11.78□□□□□ -0.52
TCF4-240ENST00000568673 ANAPC15P60006 121 aa11.78□□□□□ -0.52
TCF4-240ENST00000568673 NUTM1Q86Y26 1132 aa11.78□□□□□ -0.52
TCF4-240ENST00000568673 RAPGEF4Q8WZA2 1011 aa11.78□□□□□ -0.52
TCF4-240ENST00000568673 HDAC5Q9UQL6 1122 aa11.78□□□□□ -0.52
TCF4-240ENST00000568673 ALS2Q96Q42 1657 aa11.78□□□□□ -0.52
TCF4-240ENST00000568673 PROSER3Q2NL68 480 aa11.78□□□□□ -0.52
TCF4-240ENST00000568673 C9orf78Q9NZ63 289 aaPredicted RBP11.78□□□□□ -0.52
TCF4-240ENST00000568673 ADAMTS7Q9UKP4 1686 aa11.78□□□□□ -0.52
TCF4-240ENST00000568673 PRAMEF22A3QJZ6 481 aa11.77□□□□□ -0.52
TCF4-240ENST00000568673 SIPA1L3O60292 1781 aaPredicted RBP11.77□□□□□ -0.52
TCF4-240ENST00000568673 PI4K2BQ8TCG2 481 aa11.77□□□□□ -0.52
TCF4-240ENST00000568673 RGPD5Q99666 1765 aa11.77□□□□□ -0.52
TCF4-240ENST00000568673 ANO2Q9NQ90 1003 aa11.77□□□□□ -0.52
TCF4-240ENST00000568673 DDX21Q9NR30 783 aaKnown RBP eCLIP11.77□□□□□ -0.52
TCF4-240ENST00000568673 GOLGA6L22H0YM25 854 aa11.77□□□□□ -0.53
TCF4-240ENST00000568673 MCM2P49736 904 aa11.77□□□□□ -0.53
TCF4-240ENST00000568673 NEK4P51957 841 aa11.77□□□□□ -0.53
TCF4-240ENST00000568673 IL17RAQ96F46 866 aa11.77□□□□□ -0.53
TCF4-240ENST00000568673 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.77□□□□□ -0.53
TCF4-240ENST00000568673 TMEM94Q12767 1356 aa11.76□□□□□ -0.53
TCF4-240ENST00000568673 CYP2E1P05181 493 aaPredicted RBP11.76□□□□□ -0.53
TCF4-240ENST00000568673 XRCC6P12956 609 aaKnown RBP eCLIP11.76□□□□□ -0.53
TCF4-240ENST00000568673 ZNF790Q6PG37 636 aa11.76□□□□□ -0.53
TCF4-240ENST00000568673 NLRP2Q9NX02 1062 aa11.76□□□□□ -0.53
TCF4-240ENST00000568673 NPHP3Q7Z494 1330 aa11.76□□□□□ -0.53
TCF4-240ENST00000568673 BAG4O95429 457 aaKnown RBP11.76□□□□□ -0.53
TCF4-240ENST00000568673 DDX58O95786 925 aaKnown RBP11.76□□□□□ -0.53
TCF4-240ENST00000568673 LINS1Q8NG48 757 aa11.76□□□□□ -0.53
TCF4-240ENST00000568673 SLC52A2Q9HAB3 445 aa11.76□□□□□ -0.53
TCF4-240ENST00000568673 ISY1Q9ULR0 285 aaKnown RBP11.76□□□□□ -0.53
TCF4-240ENST00000568673 SPG7Q9UQ90 795 aa11.76□□□□□ -0.53
TCF4-240ENST00000568673 DCCP43146 1447 aa11.75□□□□□ -0.53
TCF4-240ENST00000568673 USP42Q9H9J4 1324 aaKnown RBP11.75□□□□□ -0.53
TCF4-240ENST00000568673 TATP17735 454 aaPredicted RBP11.75□□□□□ -0.53
TCF4-240ENST00000568673 PDIA6Q15084 440 aa11.75□□□□□ -0.53
TCF4-240ENST00000568673 CWF19L2Q2TBE0 894 aaKnown RBP11.75□□□□□ -0.53
TCF4-240ENST00000568673 TTC41PQ6P2S7 1318 aa11.75□□□□□ -0.53
TCF4-240ENST00000568673 PHKG2P15735 406 aa11.75□□□□□ -0.53
TCF4-240ENST00000568673 ZGPATQ8N5A5 531 aaKnown RBP11.75□□□□□ -0.53
TCF4-240ENST00000568673 PALD1Q9ULE6 856 aa11.75□□□□□ -0.53
TCF4-240ENST00000568673 UTYO14607 1347 aa11.74□□□□□ -0.53
TCF4-240ENST00000568673 MRE11P49959 708 aa11.74□□□□□ -0.53
TCF4-240ENST00000568673 OS9Q13438 667 aaPredicted RBP11.74□□□□□ -0.53
TCF4-240ENST00000568673 CADPS2Q86UW7 1296 aa11.74□□□□□ -0.53
TCF4-240ENST00000568673 IFNL2Q8IZJ0 200 aa11.74□□□□□ -0.53
TCF4-240ENST00000568673 CNTROBQ8N137 903 aa11.74□□□□□ -0.53
TCF4-240ENST00000568673 CLASRPQ8N2M8 674 aaKnown RBP11.74□□□□□ -0.53
TCF4-240ENST00000568673 NFATC2IPQ8NCF5 419 aa11.74□□□□□ -0.53
TCF4-240ENST00000568673 DDX17Q92841 729 aaKnown RBP11.74□□□□□ -0.53
TCF4-240ENST00000568673 TMX3Q96JJ7 454 aa11.74□□□□□ -0.53
TCF4-240ENST00000568673 GRM8O00222 908 aa11.74□□□□□ -0.53
TCF4-240ENST00000568673 SLC39A6Q13433 755 aa11.74□□□□□ -0.53
TCF4-240ENST00000568673 PLEKHG2Q9H7P9 1386 aa11.73□□□□□ -0.53
TCF4-240ENST00000568673 AK9Q5TCS8 1911 aa11.73□□□□□ -0.53
TCF4-240ENST00000568673 SGSM2O43147 1006 aa11.73□□□□□ -0.53
TCF4-240ENST00000568673 GLRX3O76003 335 aaKnown RBP11.73□□□□□ -0.53
TCF4-240ENST00000568673 MAP4K4O95819 1239 aaPredicted RBP11.73□□□□□ -0.53
TCF4-240ENST00000568673 HSPA4P34932 840 aa11.73□□□□□ -0.53
TCF4-240ENST00000568673 PKP1Q13835 747 aa11.73□□□□□ -0.53
TCF4-240ENST00000568673 ERC1Q8IUD2 1116 aa11.73□□□□□ -0.53
TCF4-240ENST00000568673 IL25Q9H293 177 aa11.73□□□□□ -0.53
TCF4-240ENST00000568673 KDM6AO15550 1401 aaPredicted RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms