RNA–Protein interactions for RNA: ENST00000568382.5

SCAPER-219, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 4

Gene SCAPER, Length 544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-219ENST00000568382 U3KPZ7 1027 aaPredicted RBP16.25■□□□□ 0.19
SCAPER-219ENST00000568382 POLD1P28340 1107 aa16.24■□□□□ 0.19
SCAPER-219ENST00000568382 TMPOP42166 694 aaKnown RBP16.24■□□□□ 0.19
SCAPER-219ENST00000568382 RIPK4P57078 832 aa16.24■□□□□ 0.19
SCAPER-219ENST00000568382 TAF7Q15545 349 aaPredicted RBP16.24■□□□□ 0.19
SCAPER-219ENST00000568382 ARHGEF1Q92888 912 aaKnown RBP16.24■□□□□ 0.19
SCAPER-219ENST00000568382 RUNDC1Q96C34 613 aa16.23■□□□□ 0.19
SCAPER-219ENST00000568382 FMNL2Q96PY5 1086 aa16.23■□□□□ 0.19
SCAPER-219ENST00000568382 THUMPD2Q9BTF0 503 aaKnown RBP16.23■□□□□ 0.19
SCAPER-219ENST00000568382 FHDC1Q9C0D6 1143 aaPredicted RBP16.23■□□□□ 0.19
SCAPER-219ENST00000568382 CCDC87Q9NVE4 849 aa16.23■□□□□ 0.19
SCAPER-219ENST00000568382 MIS18AQ9NYP9 233 aa16.23■□□□□ 0.19
SCAPER-219ENST00000568382 HEG1Q9ULI3 1381 aa16.23■□□□□ 0.19
SCAPER-219ENST00000568382 SYT17Q9BSW7 474 aa16.22■□□□□ 0.19
SCAPER-219ENST00000568382 RFC4P35249 363 aa16.21■□□□□ 0.19
SCAPER-219ENST00000568382 RRP7AQ9Y3A4 280 aaKnown RBP16.21■□□□□ 0.19
SCAPER-219ENST00000568382 C4AP0C0L4 1744 aa16.2■□□□□ 0.18
SCAPER-219ENST00000568382 NEUROD2Q15784 382 aa16.2■□□□□ 0.18
SCAPER-219ENST00000568382 TEX13AQ9BXU3 409 aaPredicted RBP16.2■□□□□ 0.18
SCAPER-219ENST00000568382 STARD3NLO95772 234 aa16.19■□□□□ 0.18
SCAPER-219ENST00000568382 ZBTB1Q9Y2K1 713 aa16.19■□□□□ 0.18
SCAPER-219ENST00000568382 USP16Q9Y5T5 823 aa16.19■□□□□ 0.18
SCAPER-219ENST00000568382 SOS1Q07889 1333 aaPredicted RBP16.19■□□□□ 0.18
SCAPER-219ENST00000568382 PRAMEF22A3QJZ6 481 aa16.18■□□□□ 0.18
SCAPER-219ENST00000568382 GYS1P13807 737 aa16.18■□□□□ 0.18
SCAPER-219ENST00000568382 CANXP27824 592 aaKnown RBP16.18■□□□□ 0.18
SCAPER-219ENST00000568382 KDM3BQ7LBC6 1761 aa16.18■□□□□ 0.18
SCAPER-219ENST00000568382 A1BGP04217 495 aa16.17■□□□□ 0.18
SCAPER-219ENST00000568382 KLHL34Q8N239 644 aa16.17■□□□□ 0.18
SCAPER-219ENST00000568382 NLGN1Q8N2Q7 840 aa16.17■□□□□ 0.18
SCAPER-219ENST00000568382 PNISRQ8TF01 805 aaKnown RBP16.17■□□□□ 0.18
SCAPER-219ENST00000568382 SRP68Q9UHB9 627 aaKnown RBP16.17■□□□□ 0.18
SCAPER-219ENST00000568382 TRIM35Q9UPQ4 493 aa16.17■□□□□ 0.18
SCAPER-219ENST00000568382 SNRPA1P09661 255 aaKnown RBP16.16■□□□□ 0.18
SCAPER-219ENST00000568382 LMOD3Q0VAK6 560 aa16.16■□□□□ 0.18
SCAPER-219ENST00000568382 USP42Q9H9J4 1324 aaKnown RBP16.16■□□□□ 0.18
SCAPER-219ENST00000568382 CCER2I3L3R5 266 aa16.15■□□□□ 0.18
SCAPER-219ENST00000568382 APAF1O14727 1248 aa16.15■□□□□ 0.18
SCAPER-219ENST00000568382 EIF5P55010 431 aaKnown RBP16.15■□□□□ 0.18
SCAPER-219ENST00000568382 MRS2Q9HD23 443 aa16.15■□□□□ 0.18
SCAPER-219ENST00000568382 MMP10P09238 476 aa16.14■□□□□ 0.17
SCAPER-219ENST00000568382 EIF4A1P60842 406 aaKnown RBP16.14■□□□□ 0.17
SCAPER-219ENST00000568382 FKBP8Q14318 412 aa16.14■□□□□ 0.17
SCAPER-219ENST00000568382 USPL1Q5W0Q7 1092 aa16.14■□□□□ 0.17
SCAPER-219ENST00000568382 COL15A1P39059 1388 aa16.13■□□□□ 0.17
SCAPER-219ENST00000568382 ZPR1O75312 459 aa16.13■□□□□ 0.17
SCAPER-219ENST00000568382 NLGN2Q8NFZ4 835 aa16.13■□□□□ 0.17
SCAPER-219ENST00000568382 NARFQ9UHQ1 456 aa16.13■□□□□ 0.17
SCAPER-219ENST00000568382 GIGYF1O75420 1035 aaPredicted RBP16.12■□□□□ 0.17
SCAPER-219ENST00000568382 IL6STP40189 918 aaPredicted RBP16.12■□□□□ 0.17
SCAPER-219ENST00000568382 PIP4K2AP48426 406 aaPredicted RBP16.12■□□□□ 0.17
SCAPER-219ENST00000568382 BCL2L12Q9HB09 334 aa16.12■□□□□ 0.17
SCAPER-219ENST00000568382 BABAM1Q9NWV8 329 aa16.12■□□□□ 0.17
SCAPER-219ENST00000568382 TSPYL4Q9UJ04 414 aa16.12■□□□□ 0.17
SCAPER-219ENST00000568382 CD2APQ9Y5K6 639 aa16.12■□□□□ 0.17
SCAPER-219ENST00000568382 MIER1Q8N108 512 aa16.11■□□□□ 0.17
SCAPER-219ENST00000568382 ZNF330Q9Y3S2 320 aaPredicted RBP16.11■□□□□ 0.17
SCAPER-219ENST00000568382 A0A087WZG4 1122 aa16.1■□□□□ 0.17
SCAPER-219ENST00000568382 NBPF26B4DH59 902 aa16.1■□□□□ 0.17
SCAPER-219ENST00000568382 CHL1O00533 1208 aa16.1■□□□□ 0.17
SCAPER-219ENST00000568382 TM4SF1P30408 202 aa16.1■□□□□ 0.17
SCAPER-219ENST00000568382 NBPF10Q6P3W6 841 aaKnown RBP16.1■□□□□ 0.17
SCAPER-219ENST00000568382 NBPF15Q8N660 670 aa16.1■□□□□ 0.17
SCAPER-219ENST00000568382 TBC1D2BQ9UPU7 963 aa16.1■□□□□ 0.17
SCAPER-219ENST00000568382 PARP3Q9Y6F1 533 aa16.1■□□□□ 0.17
SCAPER-219ENST00000568382 LAS1LQ9Y4W2 734 aaKnown RBP16.09■□□□□ 0.17
SCAPER-219ENST00000568382 LAMB4A4D0S4 1761 aa16.08■□□□□ 0.17
SCAPER-219ENST00000568382 SENP3-EIF4A1A0A087X0R7 540 aa16.08■□□□□ 0.16
SCAPER-219ENST00000568382 DDR1Q08345 913 aa16.08■□□□□ 0.16
SCAPER-219ENST00000568382 NFIXQ14938 502 aa16.07■□□□□ 0.16
SCAPER-219ENST00000568382 KIF13BQ9NQT8 1826 aa16.07■□□□□ 0.16
SCAPER-219ENST00000568382 POLRMTO00411 1230 aaKnown RBP16.06■□□□□ 0.16
SCAPER-219ENST00000568382 NPM2Q86SE8 214 aaKnown RBP16.06■□□□□ 0.16
SCAPER-219ENST00000568382 DZIP3Q86Y13 1208 aaKnown RBP16.06■□□□□ 0.16
SCAPER-219ENST00000568382 CFAP44Q96MT7 982 aa16.06■□□□□ 0.16
SCAPER-219ENST00000568382 CAMTA2O94983 1202 aa16.05■□□□□ 0.16
SCAPER-219ENST00000568382 ZNF853P0CG23 659 aa16.05■□□□□ 0.16
SCAPER-219ENST00000568382 GPR162Q16538 588 aa16.05■□□□□ 0.16
SCAPER-219ENST00000568382 KRT24Q2M2I5 525 aa16.05■□□□□ 0.16
SCAPER-219ENST00000568382 AFDNP55196 1824 aaKnown RBP16.04■□□□□ 0.16
SCAPER-219ENST00000568382 TBC1D9BQ66K14 1250 aa16.04■□□□□ 0.16
SCAPER-219ENST00000568382 BICDL1Q6ZP65 573 aa16.04■□□□□ 0.16
SCAPER-219ENST00000568382 PELP1Q8IZL8 1130 aaKnown RBP16.04■□□□□ 0.16
SCAPER-219ENST00000568382 FAM9BQ8IZU0 186 aa16.04■□□□□ 0.16
SCAPER-219ENST00000568382 N4BP2Q86UW6 1770 aaPredicted RBP16.03■□□□□ 0.16
SCAPER-219ENST00000568382 SCN7AQ01118 1682 aa16.03■□□□□ 0.16
SCAPER-219ENST00000568382 EIF2S2P20042 333 aaKnown RBP16.03■□□□□ 0.16
SCAPER-219ENST00000568382 NGEFQ8N5V2 710 aa16.03■□□□□ 0.16
SCAPER-219ENST00000568382 MBIPQ9NS73 344 aa16.03■□□□□ 0.16
SCAPER-219ENST00000568382 BCORQ6W2J9 1755 aa16.03■□□□□ 0.16
SCAPER-219ENST00000568382 C10orf71Q711Q0 1435 aa16.02■□□□□ 0.16
SCAPER-219ENST00000568382 KIAA1551Q9HCM1 1747 aa16.02■□□□□ 0.16
SCAPER-219ENST00000568382 SERPINB2P05120 415 aa16.02■□□□□ 0.16
SCAPER-219ENST00000568382 MYL6BP14649 208 aa16.02■□□□□ 0.16
SCAPER-219ENST00000568382 YBX3P16989 372 aaKnown RBP eCLIP16.02■□□□□ 0.16
SCAPER-219ENST00000568382 TGFB2P61812 414 aa16.02■□□□□ 0.16
SCAPER-219ENST00000568382 CALD1Q05682 793 aaKnown RBP16.02■□□□□ 0.16
SCAPER-219ENST00000568382 CCDC27Q2M243 656 aa16.02■□□□□ 0.16
SCAPER-219ENST00000568382 IFT57Q9NWB7 429 aa16.02■□□□□ 0.16
SCAPER-219ENST00000568382 NRXN2Q9P2S2 1712 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms