RNA–Protein interactions for RNA: ENST00000567988.5

FANCA-229, Transcript of FA complementation group A, humanhuman

TSL 5

Gene FANCA, Length 915 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-229ENST00000567988 EIF5P55010 431 aaKnown RBP16.22■□□□□ 0.19
FANCA-229ENST00000567988 TRAPPC3LQ5T215 181 aa16.22■□□□□ 0.19
FANCA-229ENST00000567988 MSL1Q68DK7 614 aa16.22■□□□□ 0.19
FANCA-229ENST00000567988 FHDC1Q9C0D6 1143 aaPredicted RBP16.22■□□□□ 0.19
FANCA-229ENST00000567988 EIF4A1P60842 406 aaKnown RBP16.21■□□□□ 0.19
FANCA-229ENST00000567988 SYT17Q9BSW7 474 aa16.21■□□□□ 0.19
FANCA-229ENST00000567988 TEX13AQ9BXU3 409 aaPredicted RBP16.21■□□□□ 0.19
FANCA-229ENST00000567988 BABAM1Q9NWV8 329 aa16.21■□□□□ 0.19
FANCA-229ENST00000567988 MIS18AQ9NYP9 233 aa16.21■□□□□ 0.19
FANCA-229ENST00000567988 RRP7AQ9Y3A4 280 aaKnown RBP16.21■□□□□ 0.19
FANCA-229ENST00000567988 COL15A1P39059 1388 aa16.21■□□□□ 0.19
FANCA-229ENST00000567988 LAMB4A4D0S4 1761 aa16.21■□□□□ 0.18
FANCA-229ENST00000567988 LMOD3Q0VAK6 560 aa16.2■□□□□ 0.18
FANCA-229ENST00000567988 USP16Q9Y5T5 823 aa16.2■□□□□ 0.18
FANCA-229ENST00000567988 STARD3NLO95772 234 aa16.19■□□□□ 0.18
FANCA-229ENST00000567988 SNRPA1P09661 255 aaKnown RBP16.19■□□□□ 0.18
FANCA-229ENST00000567988 POLD1P28340 1107 aa16.19■□□□□ 0.18
FANCA-229ENST00000567988 BCL2L12Q9HB09 334 aa16.19■□□□□ 0.18
FANCA-229ENST00000567988 PPP1R1BQ9UD71 204 aaPredicted RBP16.19■□□□□ 0.18
FANCA-229ENST00000567988 SRP68Q9UHB9 627 aaKnown RBP16.19■□□□□ 0.18
FANCA-229ENST00000567988 SCN7AQ01118 1682 aa16.18■□□□□ 0.18
FANCA-229ENST00000567988 CHL1O00533 1208 aa16.18■□□□□ 0.18
FANCA-229ENST00000567988 APAF1O14727 1248 aa16.18■□□□□ 0.18
FANCA-229ENST00000567988 MSH5O43196 834 aa16.18■□□□□ 0.18
FANCA-229ENST00000567988 GIGYF1O75420 1035 aaPredicted RBP16.18■□□□□ 0.18
FANCA-229ENST00000567988 NCBP3Q53F19 620 aaKnown RBP16.18■□□□□ 0.18
FANCA-229ENST00000567988 KIAA1551Q9HCM1 1747 aa16.17■□□□□ 0.18
FANCA-229ENST00000567988 A1BGP04217 495 aa16.17■□□□□ 0.18
FANCA-229ENST00000567988 ZNF853P0CG23 659 aa16.17■□□□□ 0.18
FANCA-229ENST00000567988 IL6STP40189 918 aaPredicted RBP16.17■□□□□ 0.18
FANCA-229ENST00000567988 MRS2Q9HD23 443 aa16.17■□□□□ 0.18
FANCA-229ENST00000567988 NARFQ9UHQ1 456 aa16.17■□□□□ 0.18
FANCA-229ENST00000567988 KIF13BQ9NQT8 1826 aa16.17■□□□□ 0.18
FANCA-229ENST00000567988 NBPF26B4DH59 902 aa16.16■□□□□ 0.18
FANCA-229ENST00000567988 RFC4P35249 363 aa16.16■□□□□ 0.18
FANCA-229ENST00000567988 FKBP8Q14318 412 aa16.16■□□□□ 0.18
FANCA-229ENST00000567988 NBPF10Q6P3W6 841 aaKnown RBP16.16■□□□□ 0.18
FANCA-229ENST00000567988 NLGN1Q8N2Q7 840 aa16.16■□□□□ 0.18
FANCA-229ENST00000567988 NBPF15Q8N660 670 aa16.16■□□□□ 0.18
FANCA-229ENST00000567988 C10orf71Q711Q0 1435 aa16.16■□□□□ 0.18
FANCA-229ENST00000567988 MMP10P09238 476 aa16.15■□□□□ 0.18
FANCA-229ENST00000567988 TM4SF1P30408 202 aa16.15■□□□□ 0.18
FANCA-229ENST00000567988 DDR1Q08345 913 aa16.15■□□□□ 0.18
FANCA-229ENST00000567988 NRXN2Q9P2S2 1712 aa16.15■□□□□ 0.18
FANCA-229ENST00000567988 BCORQ6W2J9 1755 aa16.15■□□□□ 0.18
FANCA-229ENST00000567988 CANXP27824 592 aaKnown RBP16.14■□□□□ 0.17
FANCA-229ENST00000567988 NEUROD2Q15784 382 aa16.14■□□□□ 0.17
FANCA-229ENST00000567988 CCDC27Q2M243 656 aa16.14■□□□□ 0.17
FANCA-229ENST00000567988 LRP10Q7Z4F1 713 aa16.14■□□□□ 0.17
FANCA-229ENST00000567988 NLGN2Q8NFZ4 835 aa16.14■□□□□ 0.17
FANCA-229ENST00000567988 CD2APQ9Y5K6 639 aa16.14■□□□□ 0.17
FANCA-229ENST00000567988 USPL1Q5W0Q7 1092 aa16.13■□□□□ 0.17
FANCA-229ENST00000567988 CFAP44Q96MT7 982 aa16.13■□□□□ 0.17
FANCA-229ENST00000567988 TSPYL4Q9UJ04 414 aa16.13■□□□□ 0.17
FANCA-229ENST00000567988 POLRMTO00411 1230 aaKnown RBP16.12■□□□□ 0.17
FANCA-229ENST00000567988 CAMTA2O94983 1202 aa16.12■□□□□ 0.17
FANCA-229ENST00000567988 A0A087WZG4 1122 aa16.11■□□□□ 0.17
FANCA-229ENST00000567988 RGL2O15211 777 aa16.11■□□□□ 0.17
FANCA-229ENST00000567988 PIP4K2AP48426 406 aaPredicted RBP16.11■□□□□ 0.17
FANCA-229ENST00000567988 PDIA6Q15084 440 aa16.11■□□□□ 0.17
FANCA-229ENST00000567988 PXDNLA1KZ92 1463 aa16.1■□□□□ 0.17
FANCA-229ENST00000567988 NFIXQ14938 502 aa16.1■□□□□ 0.17
FANCA-229ENST00000567988 IFT57Q9NWB7 429 aa16.1■□□□□ 0.17
FANCA-229ENST00000567988 ERBB4Q15303 1308 aa16.1■□□□□ 0.17
FANCA-229ENST00000567988 ZPR1O75312 459 aa16.09■□□□□ 0.17
FANCA-229ENST00000567988 KRT24Q2M2I5 525 aa16.09■□□□□ 0.17
FANCA-229ENST00000567988 MBIPQ9NS73 344 aa16.09■□□□□ 0.17
FANCA-229ENST00000567988 WWC1Q8IX03 1113 aa16.08■□□□□ 0.16
FANCA-229ENST00000567988 TBC1D2BQ9UPU7 963 aa16.08■□□□□ 0.16
FANCA-229ENST00000567988 HOXB7P09629 217 aa16.07■□□□□ 0.16
FANCA-229ENST00000567988 AFDNP55196 1824 aaKnown RBP16.07■□□□□ 0.16
FANCA-229ENST00000567988 IL16Q14005 1332 aa16.06■□□□□ 0.16
FANCA-229ENST00000567988 TBC1D9BQ66K14 1250 aa16.06■□□□□ 0.16
FANCA-229ENST00000567988 DZIP3Q86Y13 1208 aaKnown RBP16.06■□□□□ 0.16
FANCA-229ENST00000567988 ZNF521Q96K83 1311 aa16.05■□□□□ 0.16
FANCA-229ENST00000567988 CCER2I3L3R5 266 aa16.05■□□□□ 0.16
FANCA-229ENST00000567988 KCNA3P22001 575 aa16.05■□□□□ 0.16
FANCA-229ENST00000567988 GNAI1P63096 354 aa16.05■□□□□ 0.16
FANCA-229ENST00000567988 PROSER3Q2NL68 480 aa16.05■□□□□ 0.16
FANCA-229ENST00000567988 CLEC4GQ6UXB4 293 aa16.05■□□□□ 0.16
FANCA-229ENST00000567988 PARP3Q9Y6F1 533 aa16.05■□□□□ 0.16
FANCA-229ENST00000567988 BRCA1P38398 1863 aaKnown RBP16.05■□□□□ 0.16
FANCA-229ENST00000567988 CARMIL3Q8ND23 1372 aa16.04■□□□□ 0.16
FANCA-229ENST00000567988 YBX3P16989 372 aaKnown RBP eCLIP16.04■□□□□ 0.16
FANCA-229ENST00000567988 TGFB2P61812 414 aa16.04■□□□□ 0.16
FANCA-229ENST00000567988 CALD1Q05682 793 aaKnown RBP16.04■□□□□ 0.16
FANCA-229ENST00000567988 ATP10DQ9P241 1426 aa16.03■□□□□ 0.16
FANCA-229ENST00000567988 TTLL7Q6ZT98 887 aa16.03■□□□□ 0.16
FANCA-229ENST00000567988 ERVV-1B6SEH8 477 aa16.02■□□□□ 0.16
FANCA-229ENST00000567988 SERPINB2P05120 415 aa16.02■□□□□ 0.16
FANCA-229ENST00000567988 HLFQ16534 295 aa16.02■□□□□ 0.16
FANCA-229ENST00000567988 MAP3K15Q6ZN16 1313 aa16.01■□□□□ 0.15
FANCA-229ENST00000567988 DUSP27Q5VZP5 1158 aa16.01■□□□□ 0.15
FANCA-229ENST00000567988 FAM9BQ8IZU0 186 aa16.01■□□□□ 0.15
FANCA-229ENST00000567988 KLHL34Q8N239 644 aa16.01■□□□□ 0.15
FANCA-229ENST00000567988 NGEFQ8N5V2 710 aa16.01■□□□□ 0.15
FANCA-229ENST00000567988 C8orf58Q8NAV2 365 aa16.01■□□□□ 0.15
FANCA-229ENST00000567988 DDX21Q9NR30 783 aaKnown RBP eCLIP16.01■□□□□ 0.15
FANCA-229ENST00000567988 ZNF330Q9Y3S2 320 aaPredicted RBP16.01■□□□□ 0.15
FANCA-229ENST00000567988 LAS1LQ9Y4W2 734 aaKnown RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms