RNA–Protein interactions for RNA: ENST00000567742.1

AP000439.4-201, humanhuman

TSL 3 BASIC

Gene AP000439.4, Length 664 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000439.4-201ENST00000567742 PDGFDQ9GZP0 370 aaPredicted RBP19.78■□□□□ 0.76
AP000439.4-201ENST00000567742 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.77■□□□□ 0.76
AP000439.4-201ENST00000567742 CHL1O00533 1208 aa19.77■□□□□ 0.76
AP000439.4-201ENST00000567742 MSH5O43196 834 aa19.77■□□□□ 0.76
AP000439.4-201ENST00000567742 PHF14O94880 888 aa19.77■□□□□ 0.76
AP000439.4-201ENST00000567742 MTFR1LQ9H019 292 aa19.77■□□□□ 0.76
AP000439.4-201ENST00000567742 SPON1Q9HCB6 807 aa19.77■□□□□ 0.76
AP000439.4-201ENST00000567742 LAS1LQ9Y4W2 734 aaKnown RBP19.77■□□□□ 0.76
AP000439.4-201ENST00000567742 GNAI1P63096 354 aa19.76■□□□□ 0.75
AP000439.4-201ENST00000567742 TRAPPC3LQ5T215 181 aa19.76■□□□□ 0.75
AP000439.4-201ENST00000567742 INTS5Q6P9B9 1019 aaKnown RBP19.76■□□□□ 0.75
AP000439.4-201ENST00000567742 ZBTB7AO95365 584 aa19.75■□□□□ 0.75
AP000439.4-201ENST00000567742 AMIGO3Q86WK7 504 aa19.75■□□□□ 0.75
AP000439.4-201ENST00000567742 WWC1Q8IX03 1113 aa19.75■□□□□ 0.75
AP000439.4-201ENST00000567742 IFT57Q9NWB7 429 aa19.75■□□□□ 0.75
AP000439.4-201ENST00000567742 GIGYF1O75420 1035 aaPredicted RBP19.74■□□□□ 0.75
AP000439.4-201ENST00000567742 ZBTB1Q9Y2K1 713 aa19.74■□□□□ 0.75
AP000439.4-201ENST00000567742 USP16Q9Y5T5 823 aa19.74■□□□□ 0.75
AP000439.4-201ENST00000567742 ZNF853P0CG23 659 aa19.73■□□□□ 0.75
AP000439.4-201ENST00000567742 SOS1Q07889 1333 aaPredicted RBP19.73■□□□□ 0.75
AP000439.4-201ENST00000567742 COL15A1P39059 1388 aa19.72■□□□□ 0.75
AP000439.4-201ENST00000567742 PRAMEF22A3QJZ6 481 aa19.72■□□□□ 0.75
AP000439.4-201ENST00000567742 RFC4P35249 363 aa19.72■□□□□ 0.75
AP000439.4-201ENST00000567742 BCORQ6W2J9 1755 aa19.72■□□□□ 0.75
AP000439.4-201ENST00000567742 IL16Q14005 1332 aa19.72■□□□□ 0.75
AP000439.4-201ENST00000567742 SENP3-EIF4A1A0A087X0R7 540 aa19.71■□□□□ 0.75
AP000439.4-201ENST00000567742 CANXP27824 592 aaKnown RBP19.71■□□□□ 0.75
AP000439.4-201ENST00000567742 SMIM5Q71RC9 77 aa19.71■□□□□ 0.75
AP000439.4-201ENST00000567742 WDR63Q8IWG1 891 aa19.71■□□□□ 0.75
AP000439.4-201ENST00000567742 ARHGEF1Q92888 912 aaKnown RBP19.71■□□□□ 0.75
AP000439.4-201ENST00000567742 MBIPQ9NS73 344 aa19.71■□□□□ 0.75
AP000439.4-201ENST00000567742 ATF5Q9Y2D1 282 aaPredicted RBP19.71■□□□□ 0.75
AP000439.4-201ENST00000567742 SALL2Q9Y467 1007 aaPredicted RBP19.71■□□□□ 0.75
AP000439.4-201ENST00000567742 SCN7AQ01118 1682 aa19.71■□□□□ 0.75
AP000439.4-201ENST00000567742 IL6STP40189 918 aaPredicted RBP19.7■□□□□ 0.74
AP000439.4-201ENST00000567742 NPM2Q86SE8 214 aaKnown RBP19.7■□□□□ 0.74
AP000439.4-201ENST00000567742 A0A087WZG4 1122 aa19.69■□□□□ 0.74
AP000439.4-201ENST00000567742 A1BGP04217 495 aa19.69■□□□□ 0.74
AP000439.4-201ENST00000567742 POLD1P28340 1107 aa19.69■□□□□ 0.74
AP000439.4-201ENST00000567742 HOXB7P09629 217 aa19.68■□□□□ 0.74
AP000439.4-201ENST00000567742 EIF5P55010 431 aaKnown RBP19.68■□□□□ 0.74
AP000439.4-201ENST00000567742 ERBB4Q15303 1308 aa19.68■□□□□ 0.74
AP000439.4-201ENST00000567742 CACNA1FO60840 1977 aa19.67■□□□□ 0.74
AP000439.4-201ENST00000567742 PTGER2P43116 358 aa19.67■□□□□ 0.74
AP000439.4-201ENST00000567742 SGIP1Q9BQI5 828 aa19.67■□□□□ 0.74
AP000439.4-201ENST00000567742 USP42Q9H9J4 1324 aaKnown RBP19.67■□□□□ 0.74
AP000439.4-201ENST00000567742 ZPR1O75312 459 aa19.66■□□□□ 0.74
AP000439.4-201ENST00000567742 PPP1R1BQ9UD71 204 aaPredicted RBP19.66■□□□□ 0.74
AP000439.4-201ENST00000567742 NARFQ9UHQ1 456 aa19.66■□□□□ 0.74
AP000439.4-201ENST00000567742 NUP98P52948 1817 aa19.65■□□□□ 0.74
AP000439.4-201ENST00000567742 NLGN1Q8N2Q7 840 aa19.65■□□□□ 0.74
AP000439.4-201ENST00000567742 ZNF330Q9Y3S2 320 aaPredicted RBP19.65■□□□□ 0.74
AP000439.4-201ENST00000567742 GYS1P13807 737 aa19.64■□□□□ 0.73
AP000439.4-201ENST00000567742 EIF2S2P20042 333 aaKnown RBP19.64■□□□□ 0.73
AP000439.4-201ENST00000567742 MSL1Q68DK7 614 aa19.64■□□□□ 0.73
AP000439.4-201ENST00000567742 ZNF521Q96K83 1311 aa19.63■□□□□ 0.73
AP000439.4-201ENST00000567742 KRT24Q2M2I5 525 aa19.63■□□□□ 0.73
AP000439.4-201ENST00000567742 DUSP27Q5VZP5 1158 aa19.63■□□□□ 0.73
AP000439.4-201ENST00000567742 AFDNP55196 1824 aaKnown RBP19.62■□□□□ 0.73
AP000439.4-201ENST00000567742 NBPF26B4DH59 902 aa19.62■□□□□ 0.73
AP000439.4-201ENST00000567742 PIP4K2AP48426 406 aaPredicted RBP19.62■□□□□ 0.73
AP000439.4-201ENST00000567742 USPL1Q5W0Q7 1092 aa19.62■□□□□ 0.73
AP000439.4-201ENST00000567742 NBPF10Q6P3W6 841 aaKnown RBP19.62■□□□□ 0.73
AP000439.4-201ENST00000567742 NBPF15Q8N660 670 aa19.62■□□□□ 0.73
AP000439.4-201ENST00000567742 TSR2Q969E8 191 aaKnown RBP19.62■□□□□ 0.73
AP000439.4-201ENST00000567742 CHMP4AQ9BY43 222 aa19.62■□□□□ 0.73
AP000439.4-201ENST00000567742 SRP68Q9UHB9 627 aaKnown RBP19.62■□□□□ 0.73
AP000439.4-201ENST00000567742 ARXQ96QS3 562 aa19.61■□□□□ 0.73
AP000439.4-201ENST00000567742 MYH16Q9H6N6 1097 aa19.61■□□□□ 0.73
AP000439.4-201ENST00000567742 KIF13BQ9NQT8 1826 aa19.6■□□□□ 0.73
AP000439.4-201ENST00000567742 FANCIQ9NVI1 1328 aa19.6■□□□□ 0.73
AP000439.4-201ENST00000567742 HDGFL1Q5TGJ6 251 aa19.6■□□□□ 0.73
AP000439.4-201ENST00000567742 DZIP3Q86Y13 1208 aaKnown RBP19.6■□□□□ 0.73
AP000439.4-201ENST00000567742 GOLGA2Q08379 1002 aa19.59■□□□□ 0.73
AP000439.4-201ENST00000567742 TBC1D2BQ9UPU7 963 aa19.59■□□□□ 0.73
AP000439.4-201ENST00000567742 ANKRD36CQ5JPF3 1778 aa19.59■□□□□ 0.73
AP000439.4-201ENST00000567742 NRXN2Q9P2S2 1712 aa19.59■□□□□ 0.73
AP000439.4-201ENST00000567742 RGL2O15211 777 aa19.58■□□□□ 0.72
AP000439.4-201ENST00000567742 MYL6BP14649 208 aa19.58■□□□□ 0.72
AP000439.4-201ENST00000567742 FKBP8Q14318 412 aa19.58■□□□□ 0.72
AP000439.4-201ENST00000567742 C8orf58Q8NAV2 365 aa19.58■□□□□ 0.72
AP000439.4-201ENST00000567742 DDX21Q9NR30 783 aaKnown RBP eCLIP19.58■□□□□ 0.72
AP000439.4-201ENST00000567742 MMP10P09238 476 aa19.57■□□□□ 0.72
AP000439.4-201ENST00000567742 PDIA6Q15084 440 aa19.57■□□□□ 0.72
AP000439.4-201ENST00000567742 NECTIN2Q92692 538 aa19.57■□□□□ 0.72
AP000439.4-201ENST00000567742 DBF4Q9UBU7 674 aaPredicted RBP19.57■□□□□ 0.72
AP000439.4-201ENST00000567742 ELL2O00472 640 aaPredicted RBP19.56■□□□□ 0.72
AP000439.4-201ENST00000567742 CAMTA2O94983 1202 aa19.56■□□□□ 0.72
AP000439.4-201ENST00000567742 CLEC4GQ6UXB4 293 aa19.56■□□□□ 0.72
AP000439.4-201ENST00000567742 KIF6Q6ZMV9 814 aa19.56■□□□□ 0.72
AP000439.4-201ENST00000567742 BCL2L12Q9HB09 334 aa19.56■□□□□ 0.72
AP000439.4-201ENST00000567742 SPINK5Q9NQ38 1064 aaPredicted RBP19.56■□□□□ 0.72
AP000439.4-201ENST00000567742 ZNF652Q9Y2D9 606 aa19.56■□□□□ 0.72
AP000439.4-201ENST00000567742 PARP3Q9Y6F1 533 aa19.56■□□□□ 0.72
AP000439.4-201ENST00000567742 E9PSI1 815 aa19.55■□□□□ 0.72
AP000439.4-201ENST00000567742 TWISTNBQ3B726 338 aaPredicted RBP19.55■□□□□ 0.72
AP000439.4-201ENST00000567742 TSPYL6Q8N831 410 aa19.55■□□□□ 0.72
AP000439.4-201ENST00000567742 CHPF2Q9P2E5 772 aa19.55■□□□□ 0.72
AP000439.4-201ENST00000567742 ERVV-1B6SEH8 477 aa19.54■□□□□ 0.72
AP000439.4-201ENST00000567742 TM4SF1P30408 202 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms