RNA–Protein interactions for RNA: ENST00000567720.5

COMMD4-220, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-220ENST00000567720 BABAM1Q9NWV8 329 aa22.52■■□□□ 1.2
COMMD4-220ENST00000567720 SOS1Q07889 1333 aaPredicted RBP22.52■■□□□ 1.2
COMMD4-220ENST00000567720 CHL1O00533 1208 aa22.51■■□□□ 1.19
COMMD4-220ENST00000567720 RPS6KA4O75676 772 aa22.51■■□□□ 1.19
COMMD4-220ENST00000567720 RTCBQ9Y3I0 505 aaKnown RBP22.51■■□□□ 1.19
COMMD4-220ENST00000567720 COL15A1P39059 1388 aa22.5■■□□□ 1.19
COMMD4-220ENST00000567720 SNRPA1P09661 255 aaKnown RBP22.5■■□□□ 1.19
COMMD4-220ENST00000567720 NCBP3Q53F19 620 aaKnown RBP22.5■■□□□ 1.19
COMMD4-220ENST00000567720 WWC1Q8IX03 1113 aa22.5■■□□□ 1.19
COMMD4-220ENST00000567720 FLAD1Q8NFF5 587 aa22.5■■□□□ 1.19
COMMD4-220ENST00000567720 MTFR1LQ9H019 292 aa22.5■■□□□ 1.19
COMMD4-220ENST00000567720 LAS1LQ9Y4W2 734 aaKnown RBP22.5■■□□□ 1.19
COMMD4-220ENST00000567720 STARD3NLO95772 234 aa22.49■■□□□ 1.19
COMMD4-220ENST00000567720 ZNF853P0CG23 659 aa22.49■■□□□ 1.19
COMMD4-220ENST00000567720 CFAP44Q96MT7 982 aa22.49■■□□□ 1.19
COMMD4-220ENST00000567720 TEX13AQ9BXU3 409 aaPredicted RBP22.49■■□□□ 1.19
COMMD4-220ENST00000567720 USP16Q9Y5T5 823 aa22.49■■□□□ 1.19
COMMD4-220ENST00000567720 MSH5O43196 834 aa22.48■■□□□ 1.19
COMMD4-220ENST00000567720 GIGYF1O75420 1035 aaPredicted RBP22.48■■□□□ 1.19
COMMD4-220ENST00000567720 ADRA2BP18089 450 aa22.48■■□□□ 1.19
COMMD4-220ENST00000567720 IFT57Q9NWB7 429 aa22.48■■□□□ 1.19
COMMD4-220ENST00000567720 PTGER2P43116 358 aa22.47■■□□□ 1.19
COMMD4-220ENST00000567720 CALD1Q05682 793 aaKnown RBP22.47■■□□□ 1.19
COMMD4-220ENST00000567720 SLC16A10Q8TF71 515 aa22.47■■□□□ 1.19
COMMD4-220ENST00000567720 SGIP1Q9BQI5 828 aa22.47■■□□□ 1.19
COMMD4-220ENST00000567720 SPON1Q9HCB6 807 aa22.47■■□□□ 1.19
COMMD4-220ENST00000567720 MBIPQ9NS73 344 aa22.47■■□□□ 1.19
COMMD4-220ENST00000567720 ATF5Q9Y2D1 282 aaPredicted RBP22.47■■□□□ 1.19
COMMD4-220ENST00000567720 SALL2Q9Y467 1007 aaPredicted RBP22.47■■□□□ 1.19
COMMD4-220ENST00000567720 KRT24Q2M2I5 525 aa22.46■■□□□ 1.19
COMMD4-220ENST00000567720 ARHGEF1Q92888 912 aaKnown RBP22.46■■□□□ 1.19
COMMD4-220ENST00000567720 A1BGP04217 495 aa22.45■■□□□ 1.18
COMMD4-220ENST00000567720 CANXP27824 592 aaKnown RBP22.45■■□□□ 1.18
COMMD4-220ENST00000567720 MSL1Q68DK7 614 aa22.45■■□□□ 1.18
COMMD4-220ENST00000567720 PIP4K2AP48426 406 aaPredicted RBP22.44■■□□□ 1.18
COMMD4-220ENST00000567720 GNAI1P63096 354 aa22.44■■□□□ 1.18
COMMD4-220ENST00000567720 TRAPPC3LQ5T215 181 aa22.44■■□□□ 1.18
COMMD4-220ENST00000567720 USP42Q9H9J4 1324 aaKnown RBP22.44■■□□□ 1.18
COMMD4-220ENST00000567720 AFDNP55196 1824 aaKnown RBP22.43■■□□□ 1.18
COMMD4-220ENST00000567720 IL16Q14005 1332 aa22.43■■□□□ 1.18
COMMD4-220ENST00000567720 ZNF521Q96K83 1311 aa22.43■■□□□ 1.18
COMMD4-220ENST00000567720 EIF5P55010 431 aaKnown RBP22.43■■□□□ 1.18
COMMD4-220ENST00000567720 SRP68Q9UHB9 627 aaKnown RBP22.42■■□□□ 1.18
COMMD4-220ENST00000567720 NUP98P52948 1817 aa22.42■■□□□ 1.18
COMMD4-220ENST00000567720 KIF13BQ9NQT8 1826 aa22.42■■□□□ 1.18
COMMD4-220ENST00000567720 NBPF26B4DH59 902 aa22.41■■□□□ 1.18
COMMD4-220ENST00000567720 NBPF10Q6P3W6 841 aaKnown RBP22.41■■□□□ 1.18
COMMD4-220ENST00000567720 NGEFQ8N5V2 710 aa22.41■■□□□ 1.18
COMMD4-220ENST00000567720 NBPF15Q8N660 670 aa22.41■■□□□ 1.18
COMMD4-220ENST00000567720 TSR2Q969E8 191 aaKnown RBP22.41■■□□□ 1.18
COMMD4-220ENST00000567720 ANKRD36CQ5JPF3 1778 aa22.4■■□□□ 1.18
COMMD4-220ENST00000567720 NRXN2Q9P2S2 1712 aa22.4■■□□□ 1.18
COMMD4-220ENST00000567720 RFC4P35249 363 aa22.4■■□□□ 1.18
COMMD4-220ENST00000567720 IL6STP40189 918 aaPredicted RBP22.4■■□□□ 1.18
COMMD4-220ENST00000567720 FANCIQ9NVI1 1328 aa22.39■■□□□ 1.18
COMMD4-220ENST00000567720 GYS1P13807 737 aa22.39■■□□□ 1.17
COMMD4-220ENST00000567720 ZNF330Q9Y3S2 320 aaPredicted RBP22.39■■□□□ 1.17
COMMD4-220ENST00000567720 KIAA1551Q9HCM1 1747 aa22.39■■□□□ 1.17
COMMD4-220ENST00000567720 WDR63Q8IWG1 891 aa22.38■■□□□ 1.17
COMMD4-220ENST00000567720 SPINK5Q9NQ38 1064 aaPredicted RBP22.37■■□□□ 1.17
COMMD4-220ENST00000567720 ARFGEF2Q9Y6D5 1785 aa22.37■■□□□ 1.17
COMMD4-220ENST00000567720 ERBB4Q15303 1308 aa22.36■■□□□ 1.17
COMMD4-220ENST00000567720 HOXB7P09629 217 aa22.36■■□□□ 1.17
COMMD4-220ENST00000567720 USPL1Q5W0Q7 1092 aa22.36■■□□□ 1.17
COMMD4-220ENST00000567720 NARFQ9UHQ1 456 aa22.36■■□□□ 1.17
COMMD4-220ENST00000567720 EIF2S2P20042 333 aaKnown RBP22.35■■□□□ 1.17
COMMD4-220ENST00000567720 POLD1P28340 1107 aa22.35■■□□□ 1.17
COMMD4-220ENST00000567720 DUSP27Q5VZP5 1158 aa22.35■■□□□ 1.17
COMMD4-220ENST00000567720 BCL2L12Q9HB09 334 aa22.35■■□□□ 1.17
COMMD4-220ENST00000567720 CACNA1FO60840 1977 aa22.35■■□□□ 1.17
COMMD4-220ENST00000567720 FKBP8Q14318 412 aa22.34■■□□□ 1.17
COMMD4-220ENST00000567720 PROSER3Q2NL68 480 aa22.34■■□□□ 1.17
COMMD4-220ENST00000567720 C8orf58Q8NAV2 365 aa22.34■■□□□ 1.17
COMMD4-220ENST00000567720 NECTIN2Q92692 538 aa22.34■■□□□ 1.17
COMMD4-220ENST00000567720 A0A087WZG4 1122 aa22.33■■□□□ 1.17
COMMD4-220ENST00000567720 ZPR1O75312 459 aa22.33■■□□□ 1.17
COMMD4-220ENST00000567720 PDIA6Q15084 440 aa22.33■■□□□ 1.17
COMMD4-220ENST00000567720 LRP10Q7Z4F1 713 aa22.33■■□□□ 1.17
COMMD4-220ENST00000567720 ARXQ96QS3 562 aa22.33■■□□□ 1.17
COMMD4-220ENST00000567720 PPP1R1BQ9UD71 204 aaPredicted RBP22.33■■□□□ 1.17
COMMD4-220ENST00000567720 TBC1D2BQ9UPU7 963 aa22.33■■□□□ 1.17
COMMD4-220ENST00000567720 CAMTA2O94983 1202 aa22.32■■□□□ 1.16
COMMD4-220ENST00000567720 ANXA1P04083 346 aa22.32■■□□□ 1.16
COMMD4-220ENST00000567720 MYL6BP14649 208 aa22.32■■□□□ 1.16
COMMD4-220ENST00000567720 HDGFL1Q5TGJ6 251 aa22.32■■□□□ 1.16
COMMD4-220ENST00000567720 DZIP3Q86Y13 1208 aaKnown RBP22.32■■□□□ 1.16
COMMD4-220ENST00000567720 TSPYL6Q8N831 410 aa22.32■■□□□ 1.16
COMMD4-220ENST00000567720 ANKRD31Q8N7Z5 1873 aa22.31■■□□□ 1.16
COMMD4-220ENST00000567720 MMP10P09238 476 aa22.31■■□□□ 1.16
COMMD4-220ENST00000567720 NLGN1Q8N2Q7 840 aa22.31■■□□□ 1.16
COMMD4-220ENST00000567720 N4BP2Q86UW6 1770 aaPredicted RBP22.3■■□□□ 1.16
COMMD4-220ENST00000567720 ELL2O00472 640 aaPredicted RBP22.3■■□□□ 1.16
COMMD4-220ENST00000567720 CHPF2Q9P2E5 772 aa22.3■■□□□ 1.16
COMMD4-220ENST00000567720 BRCA1P38398 1863 aaKnown RBP22.3■■□□□ 1.16
COMMD4-220ENST00000567720 C10orf71Q711Q0 1435 aa22.3■■□□□ 1.16
COMMD4-220ENST00000567720 DDR1Q08345 913 aa22.29■■□□□ 1.16
COMMD4-220ENST00000567720 NPM2Q86SE8 214 aaKnown RBP22.29■■□□□ 1.16
COMMD4-220ENST00000567720 DLEC1Q9Y238 1755 aa22.29■■□□□ 1.16
COMMD4-220ENST00000567720 TTLL7Q6ZT98 887 aa22.28■■□□□ 1.16
COMMD4-220ENST00000567720 FHDC1Q9C0D6 1143 aaPredicted RBP22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms