RNA–Protein interactions for RNA: ENST00000567705.5

INO80E-210, Transcript of INO80 complex subunit E, human

TSL 3 BASIC

Gene INO80E, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
INO80E-210	ENST00000567705	CCDC87	Q9NVE4	849 aa		21.81	■■□□□ 1.08
INO80E-210	ENST00000567705	MIS18A	Q9NYP9	233 aa		21.81	■■□□□ 1.08
INO80E-210	ENST00000567705	SOS1	Q07889	1333 aa	Predicted RBP	21.8	■■□□□ 1.08
INO80E-210	ENST00000567705	DCAF8L1	A6NGE4	600 aa		21.8	■■□□□ 1.08
INO80E-210	ENST00000567705	ARHGEF1	Q92888	912 aa	Known RBP	21.8	■■□□□ 1.08
INO80E-210	ENST00000567705	PHF14	O94880	888 aa		21.79	■■□□□ 1.08
INO80E-210	ENST00000567705	POLD1	P28340	1107 aa		21.79	■■□□□ 1.08
INO80E-210	ENST00000567705	EIF4A1	P60842	406 aa	Known RBP	21.79	■■□□□ 1.08
INO80E-210	ENST00000567705	ZBTB1	Q9Y2K1	713 aa		21.79	■■□□□ 1.08
INO80E-210	ENST00000567705	PRAMEF22	A3QJZ6	481 aa		21.78	■■□□□ 1.08
INO80E-210	ENST00000567705	CHL1	O00533	1208 aa		21.78	■■□□□ 1.08
INO80E-210	ENST00000567705	TRAPPC3L	Q5T215	181 aa		21.78	■■□□□ 1.08
INO80E-210	ENST00000567705	USP16	Q9Y5T5	823 aa		21.78	■■□□□ 1.08
INO80E-210	ENST00000567705	GOLGB1	Q14789	3259 aa	Known RBP	21.77	■■□□□ 1.08
INO80E-210	ENST00000567705	MSH5	O43196	834 aa		21.77	■■□□□ 1.08
INO80E-210	ENST00000567705	STARD3NL	O95772	234 aa		21.77	■■□□□ 1.08
INO80E-210	ENST00000567705	SNRPA1	P09661	255 aa	Known RBP	21.77	■■□□□ 1.08
INO80E-210	ENST00000567705	EIF5	P55010	431 aa	Known RBP	21.77	■■□□□ 1.08
INO80E-210	ENST00000567705	NEUROD2	Q15784	382 aa		21.77	■■□□□ 1.08
INO80E-210	ENST00000567705	UTRN	P46939	3433 aa		21.77	■■□□□ 1.08
INO80E-210	ENST00000567705	GIGYF1	O75420	1035 aa	Predicted RBP	21.76	■■□□□ 1.07
INO80E-210	ENST00000567705	ZNF853	P0CG23	659 aa		21.76	■■□□□ 1.07
INO80E-210	ENST00000567705	CCDC27	Q2M243	656 aa		21.76	■■□□□ 1.07
INO80E-210	ENST00000567705	GYS1	P13807	737 aa		21.75	■■□□□ 1.07
INO80E-210	ENST00000567705	USP42	Q9H9J4	1324 aa	Known RBP	21.75	■■□□□ 1.07
INO80E-210	ENST00000567705	LAMB4	A4D0S4	1761 aa		21.74	■■□□□ 1.07
INO80E-210	ENST00000567705	COL15A1	P39059	1388 aa		21.74	■■□□□ 1.07
INO80E-210	ENST00000567705	CFAP44	Q96MT7	982 aa		21.73	■■□□□ 1.07
INO80E-210	ENST00000567705	A1BG	P04217	495 aa		21.72	■■□□□ 1.07
INO80E-210	ENST00000567705	IL6ST	P40189	918 aa	Predicted RBP	21.72	■■□□□ 1.07
INO80E-210	ENST00000567705	MSL1	Q68DK7	614 aa		21.72	■■□□□ 1.07
INO80E-210	ENST00000567705	TSPYL4	Q9UJ04	414 aa		21.72	■■□□□ 1.07
INO80E-210	ENST00000567705	CCER2	I3L3R5	266 aa		21.71	■■□□□ 1.07
INO80E-210	ENST00000567705	NBPF26	B4DH59	902 aa		21.7	■■□□□ 1.06
INO80E-210	ENST00000567705	RFC4	P35249	363 aa		21.7	■■□□□ 1.06
INO80E-210	ENST00000567705	NBPF10	Q6P3W6	841 aa	Known RBP	21.7	■■□□□ 1.06
INO80E-210	ENST00000567705	NBPF15	Q8N660	670 aa		21.7	■■□□□ 1.06
INO80E-210	ENST00000567705	BCL2L12	Q9HB09	334 aa		21.7	■■□□□ 1.06
INO80E-210	ENST00000567705	SRP68	Q9UHB9	627 aa	Known RBP	21.7	■■□□□ 1.06
INO80E-210	ENST00000567705	NARF	Q9UHQ1	456 aa		21.7	■■□□□ 1.06
INO80E-210	ENST00000567705	NLGN1	Q8N2Q7	840 aa		21.69	■■□□□ 1.06
INO80E-210	ENST00000567705	CANX	P27824	592 aa	Known RBP	21.68	■■□□□ 1.06
INO80E-210	ENST00000567705	WWC1	Q8IX03	1113 aa		21.68	■■□□□ 1.06
INO80E-210	ENST00000567705	IFT57	Q9NWB7	429 aa		21.68	■■□□□ 1.06
INO80E-210	ENST00000567705	YY1	P25490	414 aa		21.67	■■□□□ 1.06
INO80E-210	ENST00000567705	FKBP8	Q14318	412 aa		21.67	■■□□□ 1.06
INO80E-210	ENST00000567705	LRP10	Q7Z4F1	713 aa		21.67	■■□□□ 1.06
INO80E-210	ENST00000567705	KLHL34	Q8N239	644 aa		21.67	■■□□□ 1.06
INO80E-210	ENST00000567705	SCN7A	Q01118	1682 aa		21.66	■■□□□ 1.06
INO80E-210	ENST00000567705	TM4SF1	P30408	202 aa		21.66	■■□□□ 1.06
INO80E-210	ENST00000567705	MBIP	Q9NS73	344 aa		21.66	■■□□□ 1.06
INO80E-210	ENST00000567705	USPL1	Q5W0Q7	1092 aa		21.65	■■□□□ 1.06
INO80E-210	ENST00000567705	ERBB4	Q15303	1308 aa		21.64	■■□□□ 1.05
INO80E-210	ENST00000567705		A0A087WZG4	1122 aa		21.64	■■□□□ 1.05
INO80E-210	ENST00000567705	MMP10	P09238	476 aa		21.64	■■□□□ 1.05
INO80E-210	ENST00000567705	CALD1	Q05682	793 aa	Known RBP	21.64	■■□□□ 1.05
INO80E-210	ENST00000567705	PDIA6	Q15084	440 aa		21.64	■■□□□ 1.05
INO80E-210	ENST00000567705	KRT24	Q2M2I5	525 aa		21.64	■■□□□ 1.05
INO80E-210	ENST00000567705	DIEXF	Q68CQ4	756 aa	Known RBP	21.64	■■□□□ 1.05
INO80E-210	ENST00000567705	FAM9B	Q8IZU0	186 aa		21.64	■■□□□ 1.05
INO80E-210	ENST00000567705	IL16	Q14005	1332 aa		21.63	■■□□□ 1.05
INO80E-210	ENST00000567705	RGL2	O15211	777 aa		21.63	■■□□□ 1.05
INO80E-210	ENST00000567705	CAMTA2	O94983	1202 aa		21.63	■■□□□ 1.05
INO80E-210	ENST00000567705	HOXB7	P09629	217 aa		21.63	■■□□□ 1.05
INO80E-210	ENST00000567705	PIP4K2A	P48426	406 aa	Predicted RBP	21.63	■■□□□ 1.05
INO80E-210	ENST00000567705	GNAI1	P63096	354 aa		21.63	■■□□□ 1.05
INO80E-210	ENST00000567705	BCOR	Q6W2J9	1755 aa		21.63	■■□□□ 1.05
INO80E-210	ENST00000567705	KIF13B	Q9NQT8	1826 aa		21.62	■■□□□ 1.05
INO80E-210	ENST00000567705	ZNF521	Q96K83	1311 aa		21.62	■■□□□ 1.05
INO80E-210	ENST00000567705	ZPR1	O75312	459 aa		21.62	■■□□□ 1.05
INO80E-210	ENST00000567705	DDR1	Q08345	913 aa		21.62	■■□□□ 1.05
INO80E-210	ENST00000567705	NGEF	Q8N5V2	710 aa		21.62	■■□□□ 1.05
INO80E-210	ENST00000567705	NLGN2	Q8NFZ4	835 aa		21.62	■■□□□ 1.05
INO80E-210	ENST00000567705	CD2AP	Q9Y5K6	639 aa		21.62	■■□□□ 1.05
INO80E-210	ENST00000567705	NRXN2	Q9P2S2	1712 aa		21.61	■■□□□ 1.05
INO80E-210	ENST00000567705	POLRMT	O00411	1230 aa	Known RBP	21.6	■■□□□ 1.05
INO80E-210	ENST00000567705	C10orf71	Q711Q0	1435 aa		21.6	■■□□□ 1.05
INO80E-210	ENST00000567705	SENP3-EIF4A1	A0A087X0R7	540 aa		21.59	■■□□□ 1.05
INO80E-210	ENST00000567705	NFIX	Q14938	502 aa		21.59	■■□□□ 1.05
INO80E-210	ENST00000567705	GPR162	Q16538	588 aa		21.59	■■□□□ 1.05
INO80E-210	ENST00000567705	WDR63	Q8IWG1	891 aa		21.59	■■□□□ 1.05
INO80E-210	ENST00000567705	KIAA1551	Q9HCM1	1747 aa		21.59	■■□□□ 1.05
INO80E-210	ENST00000567705	TBC1D2B	Q9UPU7	963 aa		21.59	■■□□□ 1.05
INO80E-210	ENST00000567705	LAS1L	Q9Y4W2	734 aa	Known RBP	21.59	■■□□□ 1.05
INO80E-210	ENST00000567705	DZIP3	Q86Y13	1208 aa	Known RBP	21.58	■■□□□ 1.05
INO80E-210	ENST00000567705	CLEC4G	Q6UXB4	293 aa		21.57	■■□□□ 1.04
INO80E-210	ENST00000567705	MIER1	Q8N108	512 aa		21.57	■■□□□ 1.04
INO80E-210	ENST00000567705	PROSER3	Q2NL68	480 aa		21.56	■■□□□ 1.04
INO80E-210	ENST00000567705	DUSP27	Q5VZP5	1158 aa		21.55	■■□□□ 1.04
INO80E-210	ENST00000567705	TBC1D9B	Q66K14	1250 aa		21.55	■■□□□ 1.04
INO80E-210	ENST00000567705	C8orf58	Q8NAV2	365 aa		21.55	■■□□□ 1.04
INO80E-210	ENST00000567705	SPINK5	Q9NQ38	1064 aa	Predicted RBP	21.55	■■□□□ 1.04
INO80E-210	ENST00000567705	ERVV-1	B6SEH8	477 aa		21.54	■■□□□ 1.04
INO80E-210	ENST00000567705	PARP3	Q9Y6F1	533 aa		21.54	■■□□□ 1.04
INO80E-210	ENST00000567705	PXDNL	A1KZ92	1463 aa		21.53	■■□□□ 1.04
INO80E-210	ENST00000567705	AFDN	P55196	1824 aa	Known RBP	21.53	■■□□□ 1.04
INO80E-210	ENST00000567705	EIF2S2	P20042	333 aa	Known RBP	21.53	■■□□□ 1.04
INO80E-210	ENST00000567705	PELP1	Q8IZL8	1130 aa	Known RBP	21.53	■■□□□ 1.04
INO80E-210	ENST00000567705	TSR2	Q969E8	191 aa	Known RBP	21.53	■■□□□ 1.04
INO80E-210	ENST00000567705	DDX21	Q9NR30	783 aa	Known RBP eCLIP	21.53	■■□□□ 1.04

Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms