RNA–Protein interactions for RNA: ENST00000567621.5

FANCA-225, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-225ENST00000567621 BRCA1P38398 1863 aaKnown RBP13.05□□□□□ -0.32
FANCA-225ENST00000567621 KIAA1551Q9HCM1 1747 aa13.05□□□□□ -0.32
FANCA-225ENST00000567621 NRXN2Q9P2S2 1712 aa13.05□□□□□ -0.32
FANCA-225ENST00000567621 STARD3NLO95772 234 aa13.04□□□□□ -0.32
FANCA-225ENST00000567621 INTS5Q6P9B9 1019 aaKnown RBP13.04□□□□□ -0.32
FANCA-225ENST00000567621 N4BP2Q86UW6 1770 aaPredicted RBP13.03□□□□□ -0.32
FANCA-225ENST00000567621 RFC4P35249 363 aa13.03□□□□□ -0.32
FANCA-225ENST00000567621 COL15A1P39059 1388 aa13.03□□□□□ -0.32
FANCA-225ENST00000567621 DLEC1Q9Y238 1755 aa13.02□□□□□ -0.32
FANCA-225ENST00000567621 CCDC184Q52MB2 194 aa13.02□□□□□ -0.33
FANCA-225ENST00000567621 SMIM5Q71RC9 77 aa13.02□□□□□ -0.33
FANCA-225ENST00000567621 ARHGEF1Q92888 912 aaKnown RBP13.02□□□□□ -0.33
FANCA-225ENST00000567621 MRS2Q9HD23 443 aa13.02□□□□□ -0.33
FANCA-225ENST00000567621 BABAM1Q9NWV8 329 aa13.02□□□□□ -0.33
FANCA-225ENST00000567621 SOS1Q07889 1333 aaPredicted RBP13.02□□□□□ -0.33
FANCA-225ENST00000567621 ANKRD36CQ5JPF3 1778 aa13.02□□□□□ -0.33
FANCA-225ENST00000567621 UTRNP46939 3433 aa13.01□□□□□ -0.33
FANCA-225ENST00000567621 KCNQ3O43525 872 aa13.01□□□□□ -0.33
FANCA-225ENST00000567621 SNRPA1P09661 255 aaKnown RBP13.01□□□□□ -0.33
FANCA-225ENST00000567621 MSL1Q68DK7 614 aa13.01□□□□□ -0.33
FANCA-225ENST00000567621 THUMPD2Q9BTF0 503 aaKnown RBP13.01□□□□□ -0.33
FANCA-225ENST00000567621 FHDC1Q9C0D6 1143 aaPredicted RBP13.01□□□□□ -0.33
FANCA-225ENST00000567621 ZBTB1Q9Y2K1 713 aa13.01□□□□□ -0.33
FANCA-225ENST00000567621 USP42Q9H9J4 1324 aaKnown RBP13.01□□□□□ -0.33
FANCA-225ENST00000567621 CACNA1FO60840 1977 aa13.01□□□□□ -0.33
FANCA-225ENST00000567621 NEUROD2Q15784 382 aa13□□□□□ -0.33
FANCA-225ENST00000567621 NLGN1Q8N2Q7 840 aa13□□□□□ -0.33
FANCA-225ENST00000567621 TRIM35Q9UPQ4 493 aa13□□□□□ -0.33
FANCA-225ENST00000567621 RRP7AQ9Y3A4 280 aaKnown RBP13□□□□□ -0.33
FANCA-225ENST00000567621 GYS1P13807 737 aa12.99□□□□□ -0.33
FANCA-225ENST00000567621 SYT17Q9BSW7 474 aa12.99□□□□□ -0.33
FANCA-225ENST00000567621 MIS18AQ9NYP9 233 aa12.99□□□□□ -0.33
FANCA-225ENST00000567621 ARFGEF1Q9Y6D6 1849 aa12.99□□□□□ -0.33
FANCA-225ENST00000567621 APAF1O14727 1248 aa12.98□□□□□ -0.33
FANCA-225ENST00000567621 ZPR1O75312 459 aa12.98□□□□□ -0.33
FANCA-225ENST00000567621 CANXP27824 592 aaKnown RBP12.98□□□□□ -0.33
FANCA-225ENST00000567621 IL6STP40189 918 aaPredicted RBP12.98□□□□□ -0.33
FANCA-225ENST00000567621 EIF5P55010 431 aaKnown RBP12.98□□□□□ -0.33
FANCA-225ENST00000567621 EIF4A1P60842 406 aaKnown RBP12.98□□□□□ -0.33
FANCA-225ENST00000567621 TSPYL4Q9UJ04 414 aa12.98□□□□□ -0.33
FANCA-225ENST00000567621 ANKRD31Q8N7Z5 1873 aa12.97□□□□□ -0.33
FANCA-225ENST00000567621 A0A087WZG4 1122 aa12.97□□□□□ -0.33
FANCA-225ENST00000567621 NARFQ9UHQ1 456 aa12.97□□□□□ -0.33
FANCA-225ENST00000567621 USP16Q9Y5T5 823 aa12.97□□□□□ -0.33
FANCA-225ENST00000567621 CACNA1SQ13698 1873 aa12.97□□□□□ -0.33
FANCA-225ENST00000567621 PRAMEF22A3QJZ6 481 aa12.96□□□□□ -0.33
FANCA-225ENST00000567621 GIGYF1O75420 1035 aaPredicted RBP12.96□□□□□ -0.33
FANCA-225ENST00000567621 MMP10P09238 476 aa12.96□□□□□ -0.33
FANCA-225ENST00000567621 CALD1Q05682 793 aaKnown RBP12.96□□□□□ -0.33
FANCA-225ENST00000567621 NPM2Q86SE8 214 aaKnown RBP12.96□□□□□ -0.33
FANCA-225ENST00000567621 SRP68Q9UHB9 627 aaKnown RBP12.96□□□□□ -0.33
FANCA-225ENST00000567621 CD2APQ9Y5K6 639 aa12.96□□□□□ -0.33
FANCA-225ENST00000567621 ARFGEF2Q9Y6D5 1785 aa12.95□□□□□ -0.34
FANCA-225ENST00000567621 CHL1O00533 1208 aa12.95□□□□□ -0.34
FANCA-225ENST00000567621 A1BGP04217 495 aa12.95□□□□□ -0.34
FANCA-225ENST00000567621 NCBP3Q53F19 620 aaKnown RBP12.95□□□□□ -0.34
FANCA-225ENST00000567621 USPL1Q5W0Q7 1092 aa12.95□□□□□ -0.34
FANCA-225ENST00000567621 CFAP44Q96MT7 982 aa12.95□□□□□ -0.34
FANCA-225ENST00000567621 C10orf71Q711Q0 1435 aa12.95□□□□□ -0.34
FANCA-225ENST00000567621 DCAF8L1A6NGE4 600 aa12.94□□□□□ -0.34
FANCA-225ENST00000567621 FKBP8Q14318 412 aa12.94□□□□□ -0.34
FANCA-225ENST00000567621 KLHL34Q8N239 644 aa12.94□□□□□ -0.34
FANCA-225ENST00000567621 ERBB4Q15303 1308 aa12.93□□□□□ -0.34
FANCA-225ENST00000567621 CCDC27Q2M243 656 aa12.93□□□□□ -0.34
FANCA-225ENST00000567621 ZNF330Q9Y3S2 320 aaPredicted RBP12.93□□□□□ -0.34
FANCA-225ENST00000567621 PARP3Q9Y6F1 533 aa12.93□□□□□ -0.34
FANCA-225ENST00000567621 COL11A2P13942 1736 aaPredicted RBP12.93□□□□□ -0.34
FANCA-225ENST00000567621 NBPF26B4DH59 902 aa12.92□□□□□ -0.34
FANCA-225ENST00000567621 RGL2O15211 777 aa12.92□□□□□ -0.34
FANCA-225ENST00000567621 TM4SF1P30408 202 aa12.92□□□□□ -0.34
FANCA-225ENST00000567621 GNAI1P63096 354 aa12.92□□□□□ -0.34
FANCA-225ENST00000567621 NBPF10Q6P3W6 841 aaKnown RBP12.92□□□□□ -0.34
FANCA-225ENST00000567621 NBPF15Q8N660 670 aa12.92□□□□□ -0.34
FANCA-225ENST00000567621 BCL2L12Q9HB09 334 aa12.92□□□□□ -0.34
FANCA-225ENST00000567621 IFT57Q9NWB7 429 aa12.92□□□□□ -0.34
FANCA-225ENST00000567621 LAS1LQ9Y4W2 734 aaKnown RBP12.92□□□□□ -0.34
FANCA-225ENST00000567621 HOXB7P09629 217 aa12.91□□□□□ -0.34
FANCA-225ENST00000567621 ZNF853P0CG23 659 aa12.91□□□□□ -0.34
FANCA-225ENST00000567621 DZIP3Q86Y13 1208 aaKnown RBP12.91□□□□□ -0.34
FANCA-225ENST00000567621 NLGN2Q8NFZ4 835 aa12.91□□□□□ -0.34
FANCA-225ENST00000567621 TBC1D2BQ9UPU7 963 aa12.91□□□□□ -0.34
FANCA-225ENST00000567621 PXDNLA1KZ92 1463 aa12.91□□□□□ -0.34
FANCA-225ENST00000567621 POLRMTO00411 1230 aaKnown RBP12.9□□□□□ -0.34
FANCA-225ENST00000567621 CAMTA2O94983 1202 aa12.9□□□□□ -0.34
FANCA-225ENST00000567621 PIP4K2AP48426 406 aaPredicted RBP12.9□□□□□ -0.34
FANCA-225ENST00000567621 DDR1Q08345 913 aa12.9□□□□□ -0.34
FANCA-225ENST00000567621 FAM9BQ8IZU0 186 aa12.9□□□□□ -0.34
FANCA-225ENST00000567621 NGEFQ8N5V2 710 aa12.9□□□□□ -0.34
FANCA-225ENST00000567621 MBIPQ9NS73 344 aa12.9□□□□□ -0.34
FANCA-225ENST00000567621 CARMIL3Q8ND23 1372 aa12.9□□□□□ -0.34
FANCA-225ENST00000567621 CCDC88AQ3V6T2 1871 aa12.89□□□□□ -0.35
FANCA-225ENST00000567621 NFIXQ14938 502 aa12.89□□□□□ -0.35
FANCA-225ENST00000567621 CLEC4GQ6UXB4 293 aa12.89□□□□□ -0.35
FANCA-225ENST00000567621 WWC1Q8IX03 1113 aa12.89□□□□□ -0.35
FANCA-225ENST00000567621 ZNF652Q9Y2D9 606 aa12.89□□□□□ -0.35
FANCA-225ENST00000567621 LAMB2P55268 1798 aa12.89□□□□□ -0.35
FANCA-225ENST00000567621 CCER2I3L3R5 266 aa12.88□□□□□ -0.35
FANCA-225ENST00000567621 TGFB2P61812 414 aa12.88□□□□□ -0.35
FANCA-225ENST00000567621 SBF1O95248 1867 aa12.88□□□□□ -0.35
FANCA-225ENST00000567621 IL16Q14005 1332 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms