RNA–Protein interactions for RNA: ENST00000567195.5

COMMD4-217, Transcript of COMM domain containing 4, humanhuman

TSL 2 BASIC

Gene COMMD4, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-217ENST00000567195 SNRPA1P09661 255 aaKnown RBP20.53■□□□□ 0.88
COMMD4-217ENST00000567195 ARHGEF1Q92888 912 aaKnown RBP20.53■□□□□ 0.88
COMMD4-217ENST00000567195 SGIP1Q9BQI5 828 aa20.53■□□□□ 0.88
COMMD4-217ENST00000567195 TRIM35Q9UPQ4 493 aa20.53■□□□□ 0.88
COMMD4-217ENST00000567195 MYH14Q7Z406 1995 aaKnown RBP20.53■□□□□ 0.88
COMMD4-217ENST00000567195 MSL1Q68DK7 614 aa20.52■□□□□ 0.88
COMMD4-217ENST00000567195 BABAM1Q9NWV8 329 aa20.52■□□□□ 0.88
COMMD4-217ENST00000567195 TSPYL4Q9UJ04 414 aa20.52■□□□□ 0.88
COMMD4-217ENST00000567195 ZBTB1Q9Y2K1 713 aa20.51■□□□□ 0.87
COMMD4-217ENST00000567195 CANXP27824 592 aaKnown RBP20.5■□□□□ 0.87
COMMD4-217ENST00000567195 SOS1Q07889 1333 aaPredicted RBP20.5■□□□□ 0.87
COMMD4-217ENST00000567195 EIF4A1P60842 406 aaKnown RBP20.49■□□□□ 0.87
COMMD4-217ENST00000567195 NPM2Q86SE8 214 aaKnown RBP20.49■□□□□ 0.87
COMMD4-217ENST00000567195 FAM9BQ8IZU0 186 aa20.49■□□□□ 0.87
COMMD4-217ENST00000567195 LAS1LQ9Y4W2 734 aaKnown RBP20.49■□□□□ 0.87
COMMD4-217ENST00000567195 KDM3BQ7LBC6 1761 aa20.49■□□□□ 0.87
COMMD4-217ENST00000567195 COL24A1Q17RW2 1714 aa20.48■□□□□ 0.87
COMMD4-217ENST00000567195 CALD1Q05682 793 aaKnown RBP20.48■□□□□ 0.87
COMMD4-217ENST00000567195 NLGN1Q8N2Q7 840 aa20.48■□□□□ 0.87
COMMD4-217ENST00000567195 USP16Q9Y5T5 823 aa20.48■□□□□ 0.87
COMMD4-217ENST00000567195 PRAMEF22A3QJZ6 481 aa20.47■□□□□ 0.87
COMMD4-217ENST00000567195 ZPR1O75312 459 aa20.47■□□□□ 0.87
COMMD4-217ENST00000567195 COL15A1P39059 1388 aa20.46■□□□□ 0.87
COMMD4-217ENST00000567195 A0A087WZG4 1122 aa20.46■□□□□ 0.87
COMMD4-217ENST00000567195 A1BGP04217 495 aa20.46■□□□□ 0.87
COMMD4-217ENST00000567195 FHDC1Q9C0D6 1143 aaPredicted RBP20.46■□□□□ 0.87
COMMD4-217ENST00000567195 CHL1O00533 1208 aa20.45■□□□□ 0.86
COMMD4-217ENST00000567195 GIGYF1O75420 1035 aaPredicted RBP20.45■□□□□ 0.86
COMMD4-217ENST00000567195 GYS1P13807 737 aa20.45■□□□□ 0.86
COMMD4-217ENST00000567195 IL6STP40189 918 aaPredicted RBP20.45■□□□□ 0.86
COMMD4-217ENST00000567195 EIF5P55010 431 aaKnown RBP20.45■□□□□ 0.86
COMMD4-217ENST00000567195 DIEXFQ68CQ4 756 aaKnown RBP20.45■□□□□ 0.86
COMMD4-217ENST00000567195 SYT17Q9BSW7 474 aa20.45■□□□□ 0.86
COMMD4-217ENST00000567195 ZNF330Q9Y3S2 320 aaPredicted RBP20.45■□□□□ 0.86
COMMD4-217ENST00000567195 USP42Q9H9J4 1324 aaKnown RBP20.45■□□□□ 0.86
COMMD4-217ENST00000567195 KLHL34Q8N239 644 aa20.44■□□□□ 0.86
COMMD4-217ENST00000567195 CFAP44Q96MT7 982 aa20.44■□□□□ 0.86
COMMD4-217ENST00000567195 SRP68Q9UHB9 627 aaKnown RBP20.44■□□□□ 0.86
COMMD4-217ENST00000567195 NARFQ9UHQ1 456 aa20.43■□□□□ 0.86
COMMD4-217ENST00000567195 C4AP0C0L4 1744 aa20.43■□□□□ 0.86
COMMD4-217ENST00000567195 CCER2I3L3R5 266 aa20.42■□□□□ 0.86
COMMD4-217ENST00000567195 CCDC27Q2M243 656 aa20.42■□□□□ 0.86
COMMD4-217ENST00000567195 NCBP3Q53F19 620 aaKnown RBP20.42■□□□□ 0.86
COMMD4-217ENST00000567195 USPL1Q5W0Q7 1092 aa20.42■□□□□ 0.86
COMMD4-217ENST00000567195 SENP3-EIF4A1A0A087X0R7 540 aa20.41■□□□□ 0.86
COMMD4-217ENST00000567195 MMP10P09238 476 aa20.41■□□□□ 0.86
COMMD4-217ENST00000567195 GNAI1P63096 354 aa20.41■□□□□ 0.86
COMMD4-217ENST00000567195 IFT57Q9NWB7 429 aa20.41■□□□□ 0.86
COMMD4-217ENST00000567195 PIP4K2AP48426 406 aaPredicted RBP20.4■□□□□ 0.86
COMMD4-217ENST00000567195 FKBP8Q14318 412 aa20.39■□□□□ 0.85
COMMD4-217ENST00000567195 WWC1Q8IX03 1113 aa20.39■□□□□ 0.85
COMMD4-217ENST00000567195 PARP3Q9Y6F1 533 aa20.39■□□□□ 0.85
COMMD4-217ENST00000567195 LAMB4A4D0S4 1761 aa20.39■□□□□ 0.85
COMMD4-217ENST00000567195 ZNF853P0CG23 659 aa20.38■□□□□ 0.85
COMMD4-217ENST00000567195 MBIPQ9NS73 344 aa20.38■□□□□ 0.85
COMMD4-217ENST00000567195 TBC1D2BQ9UPU7 963 aa20.38■□□□□ 0.85
COMMD4-217ENST00000567195 SALL2Q9Y467 1007 aaPredicted RBP20.38■□□□□ 0.85
COMMD4-217ENST00000567195 CD2APQ9Y5K6 639 aa20.38■□□□□ 0.85
COMMD4-217ENST00000567195 NBPF26B4DH59 902 aa20.37■□□□□ 0.85
COMMD4-217ENST00000567195 EIF2S2P20042 333 aaKnown RBP20.37■□□□□ 0.85
COMMD4-217ENST00000567195 NBPF10Q6P3W6 841 aaKnown RBP20.37■□□□□ 0.85
COMMD4-217ENST00000567195 DZIP3Q86Y13 1208 aaKnown RBP20.37■□□□□ 0.85
COMMD4-217ENST00000567195 NBPF15Q8N660 670 aa20.37■□□□□ 0.85
COMMD4-217ENST00000567195 NGEFQ8N5V2 710 aa20.36■□□□□ 0.85
COMMD4-217ENST00000567195 ERBB4Q15303 1308 aa20.35■□□□□ 0.85
COMMD4-217ENST00000567195 HOXB7P09629 217 aa20.34■□□□□ 0.85
COMMD4-217ENST00000567195 TM4SF1P30408 202 aa20.34■□□□□ 0.85
COMMD4-217ENST00000567195 BCL2L12Q9HB09 334 aa20.34■□□□□ 0.85
COMMD4-217ENST00000567195 IL16Q14005 1332 aa20.33■□□□□ 0.85
COMMD4-217ENST00000567195 MYL6BP14649 208 aa20.33■□□□□ 0.85
COMMD4-217ENST00000567195 KRT24Q2M2I5 525 aa20.33■□□□□ 0.85
COMMD4-217ENST00000567195 WDR63Q8IWG1 891 aa20.33■□□□□ 0.85
COMMD4-217ENST00000567195 CAMTA2O94983 1202 aa20.32■□□□□ 0.84
COMMD4-217ENST00000567195 NFIXQ14938 502 aa20.32■□□□□ 0.84
COMMD4-217ENST00000567195 GPR162Q16538 588 aa20.32■□□□□ 0.84
COMMD4-217ENST00000567195 DUSP27Q5VZP5 1158 aa20.32■□□□□ 0.84
COMMD4-217ENST00000567195 NECTIN2Q92692 538 aa20.32■□□□□ 0.84
COMMD4-217ENST00000567195 ZNF652Q9Y2D9 606 aa20.32■□□□□ 0.84
COMMD4-217ENST00000567195 POLRMTO00411 1230 aaKnown RBP20.31■□□□□ 0.84
COMMD4-217ENST00000567195 DDR1Q08345 913 aa20.31■□□□□ 0.84
COMMD4-217ENST00000567195 BICDL1Q6ZP65 573 aa20.31■□□□□ 0.84
COMMD4-217ENST00000567195 MIER1Q8N108 512 aa20.31■□□□□ 0.84
COMMD4-217ENST00000567195 NLGN2Q8NFZ4 835 aa20.31■□□□□ 0.84
COMMD4-217ENST00000567195 HDGFL1Q5TGJ6 251 aa20.3■□□□□ 0.84
COMMD4-217ENST00000567195 CLEC4GQ6UXB4 293 aa20.3■□□□□ 0.84
COMMD4-217ENST00000567195 KIF6Q6ZMV9 814 aa20.3■□□□□ 0.84
COMMD4-217ENST00000567195 SCN7AQ01118 1682 aa20.29■□□□□ 0.84
COMMD4-217ENST00000567195 RGL2O15211 777 aa20.29■□□□□ 0.84
COMMD4-217ENST00000567195 TBC1D9BQ66K14 1250 aa20.29■□□□□ 0.84
COMMD4-217ENST00000567195 CHMP4AQ9BY43 222 aa20.29■□□□□ 0.84
COMMD4-217ENST00000567195 ELL2O00472 640 aaPredicted RBP20.28■□□□□ 0.84
COMMD4-217ENST00000567195 SERPINB2P05120 415 aa20.28■□□□□ 0.84
COMMD4-217ENST00000567195 PELP1Q8IZL8 1130 aaKnown RBP20.28■□□□□ 0.84
COMMD4-217ENST00000567195 TSR2Q969E8 191 aaKnown RBP20.28■□□□□ 0.84
COMMD4-217ENST00000567195 SETDB2Q96T68 719 aa20.28■□□□□ 0.84
COMMD4-217ENST00000567195 ERVV-1B6SEH8 477 aa20.27■□□□□ 0.84
COMMD4-217ENST00000567195 GRIN3BO60391 1043 aa20.27■□□□□ 0.84
COMMD4-217ENST00000567195 PDIA6Q15084 440 aa20.27■□□□□ 0.84
COMMD4-217ENST00000567195 DDX21Q9NR30 783 aaKnown RBP eCLIP20.27■□□□□ 0.84
COMMD4-217ENST00000567195 MAP3K15Q6ZN16 1313 aa20.27■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms