RNA–Protein interactions for RNA: ENST00000566434.5

GDPD3-204, Transcript of glycerophosphodiester phosphodiesterase domain containing 3, humanhuman

TSL 3

Gene GDPD3, Length 399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD3-204ENST00000566434 RPS6KA4O75676 772 aa16.91■□□□□ 0.3
GDPD3-204ENST00000566434 TRAPPC3LQ5T215 181 aa16.91■□□□□ 0.3
GDPD3-204ENST00000566434 SLC16A10Q8TF71 515 aa16.91■□□□□ 0.3
GDPD3-204ENST00000566434 AMIGO3Q86WK7 504 aa16.9■□□□□ 0.3
GDPD3-204ENST00000566434 BABAM1Q9NWV8 329 aa16.9■□□□□ 0.3
GDPD3-204ENST00000566434 ADRA2BP18089 450 aa16.89■□□□□ 0.29
GDPD3-204ENST00000566434 CANXP27824 592 aaKnown RBP16.89■□□□□ 0.29
GDPD3-204ENST00000566434 RFC4P35249 363 aa16.89■□□□□ 0.29
GDPD3-204ENST00000566434 EIF4A1P60842 406 aaKnown RBP16.89■□□□□ 0.29
GDPD3-204ENST00000566434 INTS5Q6P9B9 1019 aaKnown RBP16.89■□□□□ 0.29
GDPD3-204ENST00000566434 PPP1R1BQ9UD71 204 aaPredicted RBP16.89■□□□□ 0.29
GDPD3-204ENST00000566434 ZBTB1Q9Y2K1 713 aa16.89■□□□□ 0.29
GDPD3-204ENST00000566434 ZNF330Q9Y3S2 320 aaPredicted RBP16.89■□□□□ 0.29
GDPD3-204ENST00000566434 LAMB4A4D0S4 1761 aa16.89■□□□□ 0.29
GDPD3-204ENST00000566434 PRAMEF22A3QJZ6 481 aa16.88■□□□□ 0.29
GDPD3-204ENST00000566434 MSL1Q68DK7 614 aa16.88■□□□□ 0.29
GDPD3-204ENST00000566434 NPM2Q86SE8 214 aaKnown RBP16.88■□□□□ 0.29
GDPD3-204ENST00000566434 POLD1P28340 1107 aa16.87■□□□□ 0.29
GDPD3-204ENST00000566434 GNAI1P63096 354 aa16.87■□□□□ 0.29
GDPD3-204ENST00000566434 CCDC27Q2M243 656 aa16.87■□□□□ 0.29
GDPD3-204ENST00000566434 ARHGEF1Q92888 912 aaKnown RBP16.87■□□□□ 0.29
GDPD3-204ENST00000566434 CFAP44Q96MT7 982 aa16.87■□□□□ 0.29
GDPD3-204ENST00000566434 IFT57Q9NWB7 429 aa16.87■□□□□ 0.29
GDPD3-204ENST00000566434 USP16Q9Y5T5 823 aa16.87■□□□□ 0.29
GDPD3-204ENST00000566434 SOS1Q07889 1333 aaPredicted RBP16.87■□□□□ 0.29
GDPD3-204ENST00000566434 C4AP0C0L4 1744 aa16.87■□□□□ 0.29
GDPD3-204ENST00000566434 CHL1O00533 1208 aa16.86■□□□□ 0.29
GDPD3-204ENST00000566434 A1BGP04217 495 aa16.86■□□□□ 0.29
GDPD3-204ENST00000566434 WWC1Q8IX03 1113 aa16.86■□□□□ 0.29
GDPD3-204ENST00000566434 COL15A1P39059 1388 aa16.86■□□□□ 0.29
GDPD3-204ENST00000566434 GIGYF1O75420 1035 aaPredicted RBP16.85■□□□□ 0.29
GDPD3-204ENST00000566434 ARXQ96QS3 562 aa16.85■□□□□ 0.29
GDPD3-204ENST00000566434 PIP4K2AP48426 406 aaPredicted RBP16.84■□□□□ 0.29
GDPD3-204ENST00000566434 NCBP3Q53F19 620 aaKnown RBP16.84■□□□□ 0.29
GDPD3-204ENST00000566434 MBIPQ9NS73 344 aa16.84■□□□□ 0.29
GDPD3-204ENST00000566434 A0A087WZG4 1122 aa16.83■□□□□ 0.28
GDPD3-204ENST00000566434 ZPR1O75312 459 aa16.83■□□□□ 0.28
GDPD3-204ENST00000566434 PTGER2P43116 358 aa16.83■□□□□ 0.28
GDPD3-204ENST00000566434 NGEFQ8N5V2 710 aa16.83■□□□□ 0.28
GDPD3-204ENST00000566434 SRP68Q9UHB9 627 aaKnown RBP16.83■□□□□ 0.28
GDPD3-204ENST00000566434 EIF2S2P20042 333 aaKnown RBP16.82■□□□□ 0.28
GDPD3-204ENST00000566434 IL6STP40189 918 aaPredicted RBP16.82■□□□□ 0.28
GDPD3-204ENST00000566434 USP42Q9H9J4 1324 aaKnown RBP16.81■□□□□ 0.28
GDPD3-204ENST00000566434 ZNF853P0CG23 659 aa16.81■□□□□ 0.28
GDPD3-204ENST00000566434 EIF5P55010 431 aaKnown RBP16.81■□□□□ 0.28
GDPD3-204ENST00000566434 KRT24Q2M2I5 525 aa16.81■□□□□ 0.28
GDPD3-204ENST00000566434 KLHL34Q8N239 644 aa16.81■□□□□ 0.28
GDPD3-204ENST00000566434 IL16Q14005 1332 aa16.8■□□□□ 0.28
GDPD3-204ENST00000566434 COL24A1Q17RW2 1714 aa16.8■□□□□ 0.28
GDPD3-204ENST00000566434 USPL1Q5W0Q7 1092 aa16.8■□□□□ 0.28
GDPD3-204ENST00000566434 WDR63Q8IWG1 891 aa16.8■□□□□ 0.28
GDPD3-204ENST00000566434 NLGN1Q8N2Q7 840 aa16.8■□□□□ 0.28
GDPD3-204ENST00000566434 NECTIN2Q92692 538 aa16.8■□□□□ 0.28
GDPD3-204ENST00000566434 TSR2Q969E8 191 aaKnown RBP16.8■□□□□ 0.28
GDPD3-204ENST00000566434 GYS1P13807 737 aa16.79■□□□□ 0.28
GDPD3-204ENST00000566434 SGIP1Q9BQI5 828 aa16.79■□□□□ 0.28
GDPD3-204ENST00000566434 NARFQ9UHQ1 456 aa16.79■□□□□ 0.28
GDPD3-204ENST00000566434 NBPF26B4DH59 902 aa16.78■□□□□ 0.28
GDPD3-204ENST00000566434 MYL6BP14649 208 aa16.78■□□□□ 0.28
GDPD3-204ENST00000566434 DUSP27Q5VZP5 1158 aa16.78■□□□□ 0.28
GDPD3-204ENST00000566434 NBPF10Q6P3W6 841 aaKnown RBP16.78■□□□□ 0.28
GDPD3-204ENST00000566434 DZIP3Q86Y13 1208 aaKnown RBP16.78■□□□□ 0.28
GDPD3-204ENST00000566434 NBPF15Q8N660 670 aa16.78■□□□□ 0.28
GDPD3-204ENST00000566434 TBC1D2BQ9UPU7 963 aa16.78■□□□□ 0.28
GDPD3-204ENST00000566434 SCN7AQ01118 1682 aa16.78■□□□□ 0.28
GDPD3-204ENST00000566434 ERBB4Q15303 1308 aa16.77■□□□□ 0.28
GDPD3-204ENST00000566434 ELL2O00472 640 aaPredicted RBP16.77■□□□□ 0.28
GDPD3-204ENST00000566434 MMP10P09238 476 aa16.77■□□□□ 0.28
GDPD3-204ENST00000566434 HOXB7P09629 217 aa16.77■□□□□ 0.28
GDPD3-204ENST00000566434 FKBP8Q14318 412 aa16.77■□□□□ 0.28
GDPD3-204ENST00000566434 HDGFL1Q5TGJ6 251 aa16.77■□□□□ 0.28
GDPD3-204ENST00000566434 PARP3Q9Y6F1 533 aa16.76■□□□□ 0.27
GDPD3-204ENST00000566434 FANCIQ9NVI1 1328 aa16.75■□□□□ 0.27
GDPD3-204ENST00000566434 BCORQ6W2J9 1755 aa16.75■□□□□ 0.27
GDPD3-204ENST00000566434 KIF6Q6ZMV9 814 aa16.75■□□□□ 0.27
GDPD3-204ENST00000566434 MYH16Q9H6N6 1097 aa16.75■□□□□ 0.27
GDPD3-204ENST00000566434 GOLGA2Q08379 1002 aa16.74■□□□□ 0.27
GDPD3-204ENST00000566434 BICDL1Q6ZP65 573 aa16.74■□□□□ 0.27
GDPD3-204ENST00000566434 C8orf58Q8NAV2 365 aa16.74■□□□□ 0.27
GDPD3-204ENST00000566434 FHDC1Q9C0D6 1143 aaPredicted RBP16.74■□□□□ 0.27
GDPD3-204ENST00000566434 ZNF652Q9Y2D9 606 aa16.74■□□□□ 0.27
GDPD3-204ENST00000566434 CAMTA2O94983 1202 aa16.73■□□□□ 0.27
GDPD3-204ENST00000566434 ANXA1P04083 346 aa16.73■□□□□ 0.27
GDPD3-204ENST00000566434 CHPF2Q9P2E5 772 aa16.73■□□□□ 0.27
GDPD3-204ENST00000566434 PROSER3Q2NL68 480 aa16.72■□□□□ 0.27
GDPD3-204ENST00000566434 CHMP4AQ9BY43 222 aa16.72■□□□□ 0.27
GDPD3-204ENST00000566434 BCL2L12Q9HB09 334 aa16.72■□□□□ 0.27
GDPD3-204ENST00000566434 ZNF521Q96K83 1311 aa16.71■□□□□ 0.27
GDPD3-204ENST00000566434 NFIXQ14938 502 aa16.71■□□□□ 0.27
GDPD3-204ENST00000566434 TWISTNBQ3B726 338 aaPredicted RBP16.71■□□□□ 0.27
GDPD3-204ENST00000566434 TSPYL6Q8N831 410 aa16.71■□□□□ 0.27
GDPD3-204ENST00000566434 DDX21Q9NR30 783 aaKnown RBP eCLIP16.71■□□□□ 0.27
GDPD3-204ENST00000566434 DBF4Q9UBU7 674 aaPredicted RBP16.71■□□□□ 0.27
GDPD3-204ENST00000566434 HNRNPUQ00839 825 aaKnown RBP eCLIP16.7■□□□□ 0.26
GDPD3-204ENST00000566434 EXOSC9Q06265 439 aaKnown RBP16.7■□□□□ 0.26
GDPD3-204ENST00000566434 DDR1Q08345 913 aa16.7■□□□□ 0.26
GDPD3-204ENST00000566434 AIMP1Q12904 312 aaKnown RBP16.7■□□□□ 0.26
GDPD3-204ENST00000566434 PDIA6Q15084 440 aa16.7■□□□□ 0.26
GDPD3-204ENST00000566434 CCDC30Q5VVM6 783 aa16.7■□□□□ 0.26
GDPD3-204ENST00000566434 TBC1D9BQ66K14 1250 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms