RNA–Protein interactions for RNA: ENST00000566369.1

IRF8-208, Transcript of interferon regulatory factor 8, humanhuman

TSL 3

Gene IRF8, Length 1,582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF8-208ENST00000566369 TRAPPC3LQ5T215 181 aa18.09■□□□□ 0.49
IRF8-208ENST00000566369 SALL2Q9Y467 1007 aaPredicted RBP18.09■□□□□ 0.49
IRF8-208ENST00000566369 COL5A3P25940 1745 aaPredicted RBP18.09■□□□□ 0.49
IRF8-208ENST00000566369 TJP1Q07157 1748 aa18.09■□□□□ 0.49
IRF8-208ENST00000566369 MSH5O43196 834 aa18.08■□□□□ 0.49
IRF8-208ENST00000566369 GIGYF1O75420 1035 aaPredicted RBP18.08■□□□□ 0.49
IRF8-208ENST00000566369 INTS5Q6P9B9 1019 aaKnown RBP18.08■□□□□ 0.49
IRF8-208ENST00000566369 QSER1Q2KHR3 1735 aa18.08■□□□□ 0.49
IRF8-208ENST00000566369 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.08■□□□□ 0.48
IRF8-208ENST00000566369 SENP3-EIF4A1A0A087X0R7 540 aa18.07■□□□□ 0.48
IRF8-208ENST00000566369 NPM2Q86SE8 214 aaKnown RBP18.07■□□□□ 0.48
IRF8-208ENST00000566369 COL23A1Q86Y22 540 aaPredicted RBP18.07■□□□□ 0.48
IRF8-208ENST00000566369 MBIPQ9NS73 344 aa18.07■□□□□ 0.48
IRF8-208ENST00000566369 USP16Q9Y5T5 823 aa18.07■□□□□ 0.48
IRF8-208ENST00000566369 PHF14O94880 888 aa18.06■□□□□ 0.48
IRF8-208ENST00000566369 CHMP4AQ9BY43 222 aa18.06■□□□□ 0.48
IRF8-208ENST00000566369 MTFR1LQ9H019 292 aa18.05■□□□□ 0.48
IRF8-208ENST00000566369 UBR3Q6ZT12 1888 aa18.05■□□□□ 0.48
IRF8-208ENST00000566369 MYH14Q7Z406 1995 aaKnown RBP18.05■□□□□ 0.48
IRF8-208ENST00000566369 A0A087WZG4 1122 aa18.04■□□□□ 0.48
IRF8-208ENST00000566369 HOXB7P09629 217 aa18.04■□□□□ 0.48
IRF8-208ENST00000566369 CANXP27824 592 aaKnown RBP18.04■□□□□ 0.48
IRF8-208ENST00000566369 RFC4P35249 363 aa18.04■□□□□ 0.48
IRF8-208ENST00000566369 SPON1Q9HCB6 807 aa18.04■□□□□ 0.48
IRF8-208ENST00000566369 A1BGP04217 495 aa18.04■□□□□ 0.48
IRF8-208ENST00000566369 IL6STP40189 918 aaPredicted RBP18.04■□□□□ 0.48
IRF8-208ENST00000566369 ARHGEF1Q92888 912 aaKnown RBP18.04■□□□□ 0.48
IRF8-208ENST00000566369 PDGFDQ9GZP0 370 aaPredicted RBP18.04■□□□□ 0.48
IRF8-208ENST00000566369 ZBTB1Q9Y2K1 713 aa18.04■□□□□ 0.48
IRF8-208ENST00000566369 PRAMEF22A3QJZ6 481 aa18.03■□□□□ 0.48
IRF8-208ENST00000566369 MYH16Q9H6N6 1097 aa18.03■□□□□ 0.48
IRF8-208ENST00000566369 SOS1Q07889 1333 aaPredicted RBP18.03■□□□□ 0.48
IRF8-208ENST00000566369 CASZ1Q86V15 1759 aa18.02■□□□□ 0.48
IRF8-208ENST00000566369 ZBTB7AO95365 584 aa18.02■□□□□ 0.48
IRF8-208ENST00000566369 EIF5P55010 431 aaKnown RBP18.02■□□□□ 0.48
IRF8-208ENST00000566369 TUBGCP6Q96RT7 1819 aa18.02■□□□□ 0.48
IRF8-208ENST00000566369 ERBB4Q15303 1308 aa18.02■□□□□ 0.47
IRF8-208ENST00000566369 ZPR1O75312 459 aa18.01■□□□□ 0.47
IRF8-208ENST00000566369 NEFLP07196 543 aa18.01■□□□□ 0.47
IRF8-208ENST00000566369 AMIGO3Q86WK7 504 aa18.01■□□□□ 0.47
IRF8-208ENST00000566369 ZNF521Q96K83 1311 aa18.01■□□□□ 0.47
IRF8-208ENST00000566369 GOLGA2Q08379 1002 aa18■□□□□ 0.47
IRF8-208ENST00000566369 DUSP27Q5VZP5 1158 aa18■□□□□ 0.47
IRF8-208ENST00000566369 EIF2S2P20042 333 aaKnown RBP18■□□□□ 0.47
IRF8-208ENST00000566369 NLGN1Q8N2Q7 840 aa18■□□□□ 0.47
IRF8-208ENST00000566369 ATF5Q9Y2D1 282 aaPredicted RBP18■□□□□ 0.47
IRF8-208ENST00000566369 COL15A1P39059 1388 aa17.99■□□□□ 0.47
IRF8-208ENST00000566369 POLD1P28340 1107 aa17.99■□□□□ 0.47
IRF8-208ENST00000566369 SMIM5Q71RC9 77 aa17.99■□□□□ 0.47
IRF8-208ENST00000566369 TSR2Q969E8 191 aaKnown RBP17.99■□□□□ 0.47
IRF8-208ENST00000566369 NARFQ9UHQ1 456 aa17.99■□□□□ 0.47
IRF8-208ENST00000566369 LAMB4A4D0S4 1761 aa17.98■□□□□ 0.47
IRF8-208ENST00000566369 ZNF330Q9Y3S2 320 aaPredicted RBP17.98■□□□□ 0.47
IRF8-208ENST00000566369 NBPF26B4DH59 902 aa17.97■□□□□ 0.47
IRF8-208ENST00000566369 E9PSI1 815 aa17.97■□□□□ 0.47
IRF8-208ENST00000566369 KRT24Q2M2I5 525 aa17.97■□□□□ 0.47
IRF8-208ENST00000566369 HDGFL1Q5TGJ6 251 aa17.97■□□□□ 0.47
IRF8-208ENST00000566369 NBPF10Q6P3W6 841 aaKnown RBP17.97■□□□□ 0.47
IRF8-208ENST00000566369 NBPF15Q8N660 670 aa17.97■□□□□ 0.47
IRF8-208ENST00000566369 SUPT16HQ9Y5B9 1047 aaKnown RBP17.97■□□□□ 0.47
IRF8-208ENST00000566369 C8orf58Q8NAV2 365 aa17.96■□□□□ 0.47
IRF8-208ENST00000566369 ARXQ96QS3 562 aa17.96■□□□□ 0.47
IRF8-208ENST00000566369 USP42Q9H9J4 1324 aaKnown RBP17.96■□□□□ 0.47
IRF8-208ENST00000566369 FANCIQ9NVI1 1328 aa17.96■□□□□ 0.47
IRF8-208ENST00000566369 ELL2O00472 640 aaPredicted RBP17.96■□□□□ 0.46
IRF8-208ENST00000566369 HNRNPUQ00839 825 aaKnown RBP eCLIP17.96■□□□□ 0.46
IRF8-208ENST00000566369 DBF4Q9UBU7 674 aaPredicted RBP17.96■□□□□ 0.46
IRF8-208ENST00000566369 GYS1P13807 737 aa17.95■□□□□ 0.46
IRF8-208ENST00000566369 DZIP3Q86Y13 1208 aaKnown RBP17.95■□□□□ 0.46
IRF8-208ENST00000566369 DDX21Q9NR30 783 aaKnown RBP eCLIP17.95■□□□□ 0.46
IRF8-208ENST00000566369 PPP1R1BQ9UD71 204 aaPredicted RBP17.95■□□□□ 0.46
IRF8-208ENST00000566369 RGL2O15211 777 aa17.94■□□□□ 0.46
IRF8-208ENST00000566369 MYL6BP14649 208 aa17.94■□□□□ 0.46
IRF8-208ENST00000566369 PTGER2P43116 358 aa17.94■□□□□ 0.46
IRF8-208ENST00000566369 PIP4K2AP48426 406 aaPredicted RBP17.94■□□□□ 0.46
IRF8-208ENST00000566369 TWISTNBQ3B726 338 aaPredicted RBP17.94■□□□□ 0.46
IRF8-208ENST00000566369 CCDC30Q5VVM6 783 aa17.94■□□□□ 0.46
IRF8-208ENST00000566369 SPINK5Q9NQ38 1064 aaPredicted RBP17.94■□□□□ 0.46
IRF8-208ENST00000566369 TBC1D2BQ9UPU7 963 aa17.94■□□□□ 0.46
IRF8-208ENST00000566369 PDIA6Q15084 440 aa17.93■□□□□ 0.46
IRF8-208ENST00000566369 USPL1Q5W0Q7 1092 aa17.93■□□□□ 0.46
IRF8-208ENST00000566369 MSL1Q68DK7 614 aa17.93■□□□□ 0.46
IRF8-208ENST00000566369 NECTIN2Q92692 538 aa17.93■□□□□ 0.46
IRF8-208ENST00000566369 SGIP1Q9BQI5 828 aa17.93■□□□□ 0.46
IRF8-208ENST00000566369 HYPKQ9NX55 129 aa17.93■□□□□ 0.46
IRF8-208ENST00000566369 SRP68Q9UHB9 627 aaKnown RBP17.93■□□□□ 0.46
IRF8-208ENST00000566369 LRP5O75197 1615 aa17.93■□□□□ 0.46
IRF8-208ENST00000566369 SLFN5Q08AF3 891 aa17.92■□□□□ 0.46
IRF8-208ENST00000566369 CLEC4GQ6UXB4 293 aa17.92■□□□□ 0.46
IRF8-208ENST00000566369 KIF6Q6ZMV9 814 aa17.92■□□□□ 0.46
IRF8-208ENST00000566369 ZNF652Q9Y2D9 606 aa17.92■□□□□ 0.46
IRF8-208ENST00000566369 EXOSC9Q06265 439 aaKnown RBP17.91■□□□□ 0.46
IRF8-208ENST00000566369 TSPYL6Q8N831 410 aa17.91■□□□□ 0.46
IRF8-208ENST00000566369 CHPF2Q9P2E5 772 aa17.91■□□□□ 0.46
IRF8-208ENST00000566369 C4AP0C0L4 1744 aa17.91■□□□□ 0.46
IRF8-208ENST00000566369 ERVV-1B6SEH8 477 aa17.91■□□□□ 0.46
IRF8-208ENST00000566369 ERICH6BQ5W0A0 696 aa17.91■□□□□ 0.46
IRF8-208ENST00000566369 STK31Q9BXU1 1019 aa17.91■□□□□ 0.46
IRF8-208ENST00000566369 COL24A1Q17RW2 1714 aa17.9■□□□□ 0.46
IRF8-208ENST00000566369 CAMTA2O94983 1202 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms