RNA–Protein interactions for RNA: ENST00000566333.1

CDH13-208, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-208ENST00000566333 FMNL2Q96PY5 1086 aa10.65□□□□□ -0.7
CDH13-208ENST00000566333 LAS1LQ9Y4W2 734 aaKnown RBP10.65□□□□□ -0.7
CDH13-208ENST00000566333 ARFGEF2Q9Y6D5 1785 aa10.65□□□□□ -0.71
CDH13-208ENST00000566333 SRCAPQ6ZRS2 3230 aa10.64□□□□□ -0.71
CDH13-208ENST00000566333 GIGYF1O75420 1035 aaPredicted RBP10.64□□□□□ -0.71
CDH13-208ENST00000566333 AKT1S1Q96B36 256 aa10.64□□□□□ -0.71
CDH13-208ENST00000566333 CDCA7LQ96GN5 454 aa10.64□□□□□ -0.71
CDH13-208ENST00000566333 NUP98P52948 1817 aa10.63□□□□□ -0.71
CDH13-208ENST00000566333 N4BP2Q86UW6 1770 aaPredicted RBP10.63□□□□□ -0.71
CDH13-208ENST00000566333 CYP19A1P11511 503 aaPredicted RBP10.63□□□□□ -0.71
CDH13-208ENST00000566333 GOLGA2Q08379 1002 aa10.63□□□□□ -0.71
CDH13-208ENST00000566333 SLFN5Q08AF3 891 aa10.63□□□□□ -0.71
CDH13-208ENST00000566333 TRMT2AQ8IZ69 625 aaKnown RBP10.63□□□□□ -0.71
CDH13-208ENST00000566333 E9PSI1 815 aa10.62□□□□□ -0.71
CDH13-208ENST00000566333 SNRPA1P09661 255 aaKnown RBP10.62□□□□□ -0.71
CDH13-208ENST00000566333 CRKLP46109 303 aaKnown RBP10.62□□□□□ -0.71
CDH13-208ENST00000566333 TSPYL6Q8N831 410 aa10.62□□□□□ -0.71
CDH13-208ENST00000566333 ZBTB1Q9Y2K1 713 aa10.62□□□□□ -0.71
CDH13-208ENST00000566333 HOXB7P09629 217 aa10.61□□□□□ -0.71
CDH13-208ENST00000566333 DUSP27Q5VZP5 1158 aa10.61□□□□□ -0.71
CDH13-208ENST00000566333 INTS5Q6P9B9 1019 aaKnown RBP10.61□□□□□ -0.71
CDH13-208ENST00000566333 C8orf58Q8NAV2 365 aa10.61□□□□□ -0.71
CDH13-208ENST00000566333 MYH16Q9H6N6 1097 aa10.61□□□□□ -0.71
CDH13-208ENST00000566333 CCDC87Q9NVE4 849 aa10.61□□□□□ -0.71
CDH13-208ENST00000566333 USP16Q9Y5T5 823 aa10.61□□□□□ -0.71
CDH13-208ENST00000566333 SOS1Q07889 1333 aaPredicted RBP10.6□□□□□ -0.71
CDH13-208ENST00000566333 PNPLA7Q6ZV29 1317 aa10.6□□□□□ -0.71
CDH13-208ENST00000566333 SLC15A2Q16348 729 aa10.6□□□□□ -0.71
CDH13-208ENST00000566333 RC3H1Q5TC82 1133 aaKnown RBP10.6□□□□□ -0.71
CDH13-208ENST00000566333 SMIM5Q71RC9 77 aa10.6□□□□□ -0.71
CDH13-208ENST00000566333 LRP10Q7Z4F1 713 aa10.6□□□□□ -0.71
CDH13-208ENST00000566333 COL15A1P39059 1388 aa10.6□□□□□ -0.71
CDH13-208ENST00000566333 LRP5O75197 1615 aa10.59□□□□□ -0.71
CDH13-208ENST00000566333 AFDNP55196 1824 aaKnown RBP10.59□□□□□ -0.71
CDH13-208ENST00000566333 NBPF26B4DH59 902 aa10.59□□□□□ -0.71
CDH13-208ENST00000566333 GNPATO15228 680 aa10.59□□□□□ -0.71
CDH13-208ENST00000566333 PIP4K2AP48426 406 aaPredicted RBP10.59□□□□□ -0.71
CDH13-208ENST00000566333 EXOSC9Q06265 439 aaKnown RBP10.59□□□□□ -0.71
CDH13-208ENST00000566333 NBPF14Q5TI25 921 aa10.59□□□□□ -0.71
CDH13-208ENST00000566333 NBPF10Q6P3W6 841 aaKnown RBP10.59□□□□□ -0.71
CDH13-208ENST00000566333 NBPF15Q8N660 670 aa10.59□□□□□ -0.71
CDH13-208ENST00000566333 AK7Q96M32 723 aa10.59□□□□□ -0.71
CDH13-208ENST00000566333 TEX13AQ9BXU3 409 aaPredicted RBP10.59□□□□□ -0.71
CDH13-208ENST00000566333 NRXN2Q9P2S2 1712 aa10.58□□□□□ -0.72
CDH13-208ENST00000566333 STARD3NLO95772 234 aa10.58□□□□□ -0.72
CDH13-208ENST00000566333 A1BGP04217 495 aa10.58□□□□□ -0.72
CDH13-208ENST00000566333 SSFA2P28290 1259 aa10.58□□□□□ -0.72
CDH13-208ENST00000566333 PDIA6Q15084 440 aa10.58□□□□□ -0.72
CDH13-208ENST00000566333 PROSER3Q2NL68 480 aa10.58□□□□□ -0.72
CDH13-208ENST00000566333 TWISTNBQ3B726 338 aaPredicted RBP10.58□□□□□ -0.72
CDH13-208ENST00000566333 PDGFDQ9GZP0 370 aaPredicted RBP10.58□□□□□ -0.72
CDH13-208ENST00000566333 STK32BQ9NY57 414 aa10.58□□□□□ -0.72
CDH13-208ENST00000566333 ERBB4Q15303 1308 aa10.58□□□□□ -0.72
CDH13-208ENST00000566333 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.57□□□□□ -0.72
CDH13-208ENST00000566333 ELL2O00472 640 aaPredicted RBP10.57□□□□□ -0.72
CDH13-208ENST00000566333 RPS6KA4O75676 772 aa10.57□□□□□ -0.72
CDH13-208ENST00000566333 KCNA4P22459 653 aa10.57□□□□□ -0.72
CDH13-208ENST00000566333 EIF5P55010 431 aaKnown RBP10.57□□□□□ -0.72
CDH13-208ENST00000566333 R3HDM1Q15032 1099 aaKnown RBP10.57□□□□□ -0.72
CDH13-208ENST00000566333 HDGFL1Q5TGJ6 251 aa10.57□□□□□ -0.72
CDH13-208ENST00000566333 YTHDC1Q96MU7 727 aaKnown RBP10.57□□□□□ -0.72
CDH13-208ENST00000566333 KIF13BQ9NQT8 1826 aa10.56□□□□□ -0.72
CDH13-208ENST00000566333 PSDA5PKW4 1024 aaPredicted RBP10.56□□□□□ -0.72
CDH13-208ENST00000566333 VAMP4O75379 141 aa10.56□□□□□ -0.72
CDH13-208ENST00000566333 PHF14O94880 888 aa10.56□□□□□ -0.72
CDH13-208ENST00000566333 ANXA1P04083 346 aa10.56□□□□□ -0.72
CDH13-208ENST00000566333 COL23A1Q86Y22 540 aaPredicted RBP10.56□□□□□ -0.72
CDH13-208ENST00000566333 NECTIN2Q92692 538 aa10.56□□□□□ -0.72
CDH13-208ENST00000566333 TFCP2L1Q9NZI6 479 aa10.56□□□□□ -0.72
CDH13-208ENST00000566333 CHPF2Q9P2E5 772 aa10.56□□□□□ -0.72
CDH13-208ENST00000566333 LAMB2P55268 1798 aa10.56□□□□□ -0.72
CDH13-208ENST00000566333 EIF2S2P20042 333 aaKnown RBP10.55□□□□□ -0.72
CDH13-208ENST00000566333 CANXP27824 592 aaKnown RBP10.55□□□□□ -0.72
CDH13-208ENST00000566333 IL6STP40189 918 aaPredicted RBP10.55□□□□□ -0.72
CDH13-208ENST00000566333 RTCBQ9Y3I0 505 aaKnown RBP10.55□□□□□ -0.72
CDH13-208ENST00000566333 KIAA1551Q9HCM1 1747 aa10.55□□□□□ -0.72
CDH13-208ENST00000566333 ANKRD31Q8N7Z5 1873 aa10.55□□□□□ -0.72
CDH13-208ENST00000566333 USP42Q9H9J4 1324 aaKnown RBP10.55□□□□□ -0.72
CDH13-208ENST00000566333 HMGB2P26583 209 aaKnown RBP10.54□□□□□ -0.72
CDH13-208ENST00000566333 ARHGEF1Q92888 912 aaKnown RBP10.54□□□□□ -0.72
CDH13-208ENST00000566333 DDX21Q9NR30 783 aaKnown RBP eCLIP10.54□□□□□ -0.72
CDH13-208ENST00000566333 MYL6BP14649 208 aa10.53□□□□□ -0.72
CDH13-208ENST00000566333 DBF4Q9UBU7 674 aaPredicted RBP10.53□□□□□ -0.72
CDH13-208ENST00000566333 SRP68Q9UHB9 627 aaKnown RBP10.53□□□□□ -0.72
CDH13-208ENST00000566333 COL11A2P13942 1736 aaPredicted RBP10.53□□□□□ -0.72
CDH13-208ENST00000566333 DDX60Q8IY21 1712 aaKnown RBP10.53□□□□□ -0.72
CDH13-208ENST00000566333 DLEC1Q9Y238 1755 aa10.52□□□□□ -0.72
CDH13-208ENST00000566333 ATP10DQ9P241 1426 aa10.52□□□□□ -0.73
CDH13-208ENST00000566333 TCERG1O14776 1098 aaKnown RBP10.52□□□□□ -0.73
CDH13-208ENST00000566333 CAMTA2O94983 1202 aa10.52□□□□□ -0.73
CDH13-208ENST00000566333 CCDC30Q5VVM6 783 aa10.52□□□□□ -0.73
CDH13-208ENST00000566333 TTLL7Q6ZT98 887 aa10.52□□□□□ -0.73
CDH13-208ENST00000566333 FLAD1Q8NFF5 587 aa10.52□□□□□ -0.73
CDH13-208ENST00000566333 BCL2L12Q9HB09 334 aa10.52□□□□□ -0.73
CDH13-208ENST00000566333 ZNF330Q9Y3S2 320 aaPredicted RBP10.52□□□□□ -0.73
CDH13-208ENST00000566333 TNRC6CQ9HCJ0 1690 aaKnown RBP10.52□□□□□ -0.73
CDH13-208ENST00000566333 ADCY9O60503 1353 aa10.52□□□□□ -0.73
CDH13-208ENST00000566333 BRCA1P38398 1863 aaKnown RBP10.51□□□□□ -0.73
CDH13-208ENST00000566333 MYH3P11055 1940 aa10.51□□□□□ -0.73
CDH13-208ENST00000566333 CT47B1P0C2W7 299 aaPredicted RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms