RNA–Protein interactions for RNA: ENST00000565844.1

KNOP1-203, Transcript of lysine rich nucleolar protein 1, humanhuman

TSL 5

Gene KNOP1, Length 1,394 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-203ENST00000565844 FMNL2Q96PY5 1086 aa19.75■□□□□ 0.75
KNOP1-203ENST00000565844 TJP1Q07157 1748 aa19.75■□□□□ 0.75
KNOP1-203ENST00000565844 ZNF831Q5JPB2 1677 aa19.74■□□□□ 0.75
KNOP1-203ENST00000565844 EXOSC9Q06265 439 aaKnown RBP19.74■□□□□ 0.75
KNOP1-203ENST00000565844 KRT24Q2M2I5 525 aa19.74■□□□□ 0.75
KNOP1-203ENST00000565844 ARXQ96QS3 562 aa19.74■□□□□ 0.75
KNOP1-203ENST00000565844 SYT17Q9BSW7 474 aa19.74■□□□□ 0.75
KNOP1-203ENST00000565844 C4BP0C0L5 1744 aa19.74■□□□□ 0.75
KNOP1-203ENST00000565844 CICQ96RK0 1608 aaPredicted RBP19.74■□□□□ 0.75
KNOP1-203ENST00000565844 RBM42Q9BTD8 480 aaKnown RBP19.73■□□□□ 0.75
KNOP1-203ENST00000565844 HEG1Q9ULI3 1381 aa19.72■□□□□ 0.75
KNOP1-203ENST00000565844 DCAF8L1A6NGE4 600 aa19.72■□□□□ 0.75
KNOP1-203ENST00000565844 SMIM5Q71RC9 77 aa19.72■□□□□ 0.75
KNOP1-203ENST00000565844 C8orf58Q8NAV2 365 aa19.72■□□□□ 0.75
KNOP1-203ENST00000565844 UBR3Q6ZT12 1888 aa19.72■□□□□ 0.75
KNOP1-203ENST00000565844 YY1P25490 414 aa19.71■□□□□ 0.75
KNOP1-203ENST00000565844 MSL1Q68DK7 614 aa19.71■□□□□ 0.75
KNOP1-203ENST00000565844 COL23A1Q86Y22 540 aaPredicted RBP19.71■□□□□ 0.75
KNOP1-203ENST00000565844 ELL2O00472 640 aaPredicted RBP19.7■□□□□ 0.74
KNOP1-203ENST00000565844 TWISTNBQ3B726 338 aaPredicted RBP19.7■□□□□ 0.74
KNOP1-203ENST00000565844 TSPYL6Q8N831 410 aa19.7■□□□□ 0.74
KNOP1-203ENST00000565844 COL5A3P25940 1745 aaPredicted RBP19.7■□□□□ 0.74
KNOP1-203ENST00000565844 LOC102724428A0A0B4J2F2 783 aa19.7■□□□□ 0.74
KNOP1-203ENST00000565844 SIK1P57059 783 aa19.7■□□□□ 0.74
KNOP1-203ENST00000565844 GIGYF1O75420 1035 aaPredicted RBP19.69■□□□□ 0.74
KNOP1-203ENST00000565844 SNRPA1P09661 255 aaKnown RBP19.69■□□□□ 0.74
KNOP1-203ENST00000565844 VSIG10Q8N0Z9 540 aa19.69■□□□□ 0.74
KNOP1-203ENST00000565844 CHD4Q14839 1912 aa19.68■□□□□ 0.74
KNOP1-203ENST00000565844 PRAMEF22A3QJZ6 481 aa19.68■□□□□ 0.74
KNOP1-203ENST00000565844 POLD1P28340 1107 aa19.68■□□□□ 0.74
KNOP1-203ENST00000565844 AMIGO3Q86WK7 504 aa19.68■□□□□ 0.74
KNOP1-203ENST00000565844 SLC16A10Q8TF71 515 aa19.68■□□□□ 0.74
KNOP1-203ENST00000565844 SLC4A9Q96Q91 983 aa19.68■□□□□ 0.74
KNOP1-203ENST00000565844 SOS1Q07889 1333 aaPredicted RBP19.67■□□□□ 0.74
KNOP1-203ENST00000565844 UTRNP46939 3433 aa19.67■□□□□ 0.74
KNOP1-203ENST00000565844 PHF14O94880 888 aa19.67■□□□□ 0.74
KNOP1-203ENST00000565844 HOXB7P09629 217 aa19.67■□□□□ 0.74
KNOP1-203ENST00000565844 ATP6V1AP38606 617 aa19.67■□□□□ 0.74
KNOP1-203ENST00000565844 VAMP4O75379 141 aa19.65■□□□□ 0.74
KNOP1-203ENST00000565844 CT47B1P0C2W7 299 aaPredicted RBP19.65■□□□□ 0.74
KNOP1-203ENST00000565844 DNAJC10Q8IXB1 793 aa19.65■□□□□ 0.74
KNOP1-203ENST00000565844 LINC00116Q8NCU8 138 aa19.65■□□□□ 0.74
KNOP1-203ENST00000565844 AK7Q96M32 723 aa19.65■□□□□ 0.74
KNOP1-203ENST00000565844 EIF2S2P20042 333 aaKnown RBP19.64■□□□□ 0.73
KNOP1-203ENST00000565844 ITPK1Q13572 414 aa19.64■□□□□ 0.73
KNOP1-203ENST00000565844 HDGFL1Q5TGJ6 251 aa19.64■□□□□ 0.73
KNOP1-203ENST00000565844 PELP1Q8IZL8 1130 aaKnown RBP19.64■□□□□ 0.73
KNOP1-203ENST00000565844 NECTIN2Q92692 538 aa19.64■□□□□ 0.73
KNOP1-203ENST00000565844 TEX13AQ9BXU3 409 aaPredicted RBP19.64■□□□□ 0.73
KNOP1-203ENST00000565844 USP16Q9Y5T5 823 aa19.64■□□□□ 0.73
KNOP1-203ENST00000565844 NLGN2Q8NFZ4 835 aa19.63■□□□□ 0.73
KNOP1-203ENST00000565844 GOLGB1Q14789 3259 aaKnown RBP19.62■□□□□ 0.73
KNOP1-203ENST00000565844 CACNA1FO60840 1977 aa19.62■□□□□ 0.73
KNOP1-203ENST00000565844 STARD3NLO95772 234 aa19.61■□□□□ 0.73
KNOP1-203ENST00000565844 CHMP4AQ9BY43 222 aa19.61■□□□□ 0.73
KNOP1-203ENST00000565844 TCERG1O14776 1098 aaKnown RBP19.6■□□□□ 0.73
KNOP1-203ENST00000565844 CENPBP07199 599 aaPredicted RBP19.6■□□□□ 0.73
KNOP1-203ENST00000565844 CYP19A1P11511 503 aaPredicted RBP19.6■□□□□ 0.73
KNOP1-203ENST00000565844 CCDC30Q5VVM6 783 aa19.6■□□□□ 0.73
KNOP1-203ENST00000565844 ZNF428Q96B54 188 aa19.6■□□□□ 0.73
KNOP1-203ENST00000565844 MYH14Q7Z406 1995 aaKnown RBP19.6■□□□□ 0.73
KNOP1-203ENST00000565844 RCAN3Q9UKA8 241 aa19.59■□□□□ 0.73
KNOP1-203ENST00000565844 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.58■□□□□ 0.73
KNOP1-203ENST00000565844 GNPATO15228 680 aa19.58■□□□□ 0.73
KNOP1-203ENST00000565844 GPR162Q16538 588 aa19.58■□□□□ 0.73
KNOP1-203ENST00000565844 BCL2L13Q9BXK5 485 aa19.58■□□□□ 0.73
KNOP1-203ENST00000565844 STK31Q9BXU1 1019 aa19.58■□□□□ 0.73
KNOP1-203ENST00000565844 CHPF2Q9P2E5 772 aa19.58■□□□□ 0.73
KNOP1-203ENST00000565844 CRKLP46109 303 aaKnown RBP19.57■□□□□ 0.72
KNOP1-203ENST00000565844 RARSP54136 660 aaKnown RBP19.57■□□□□ 0.72
KNOP1-203ENST00000565844 SSH1Q8WYL5 1049 aa19.57■□□□□ 0.72
KNOP1-203ENST00000565844 SMC4Q9NTJ3 1288 aa19.57■□□□□ 0.72
KNOP1-203ENST00000565844 ERBB4Q15303 1308 aa19.57■□□□□ 0.72
KNOP1-203ENST00000565844 A1BGP04217 495 aa19.57■□□□□ 0.72
KNOP1-203ENST00000565844 PIP4K2AP48426 406 aaPredicted RBP19.57■□□□□ 0.72
KNOP1-203ENST00000565844 ALDH1L2Q3SY69 923 aa19.57■□□□□ 0.72
KNOP1-203ENST00000565844 CCDC87Q9NVE4 849 aa19.57■□□□□ 0.72
KNOP1-203ENST00000565844 DBF4Q9UBU7 674 aaPredicted RBP19.57■□□□□ 0.72
KNOP1-203ENST00000565844 CNTNAP4Q9C0A0 1308 aa19.56■□□□□ 0.72
KNOP1-203ENST00000565844 FLAD1Q8NFF5 587 aa19.56■□□□□ 0.72
KNOP1-203ENST00000565844 MYL6BP14649 208 aa19.55■□□□□ 0.72
KNOP1-203ENST00000565844 HMGB2P26583 209 aaKnown RBP19.55■□□□□ 0.72
KNOP1-203ENST00000565844 PROSER3Q2NL68 480 aa19.55■□□□□ 0.72
KNOP1-203ENST00000565844 INTS5Q6P9B9 1019 aaKnown RBP19.55■□□□□ 0.72
KNOP1-203ENST00000565844 DDX21Q9NR30 783 aaKnown RBP eCLIP19.55■□□□□ 0.72
KNOP1-203ENST00000565844 ZBTB1Q9Y2K1 713 aa19.55■□□□□ 0.72
KNOP1-203ENST00000565844 C4AP0C0L4 1744 aa19.54■□□□□ 0.72
KNOP1-203ENST00000565844 NBPF26B4DH59 902 aa19.54■□□□□ 0.72
KNOP1-203ENST00000565844 BCAR3O75815 825 aa19.54■□□□□ 0.72
KNOP1-203ENST00000565844 ANXA1P04083 346 aa19.54■□□□□ 0.72
KNOP1-203ENST00000565844 SLC4A2P04920 1241 aa19.54■□□□□ 0.72
KNOP1-203ENST00000565844 CANXP27824 592 aaKnown RBP19.54■□□□□ 0.72
KNOP1-203ENST00000565844 PDIA6Q15084 440 aa19.54■□□□□ 0.72
KNOP1-203ENST00000565844 NBPF10Q6P3W6 841 aaKnown RBP19.54■□□□□ 0.72
KNOP1-203ENST00000565844 NBPF15Q8N660 670 aa19.54■□□□□ 0.72
KNOP1-203ENST00000565844 WWC3Q9ULE0 1092 aa19.54■□□□□ 0.72
KNOP1-203ENST00000565844 SSFA2P28290 1259 aa19.52■□□□□ 0.72
KNOP1-203ENST00000565844 RC3H1Q5TC82 1133 aaKnown RBP19.52■□□□□ 0.72
KNOP1-203ENST00000565844 MRPL50Q8N5N7 158 aaKnown RBP19.52■□□□□ 0.72
KNOP1-203ENST00000565844 HYPKQ9NX55 129 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms