RNA–Protein interactions for RNA: ENST00000565636.5

CDH13-207, Transcript of cadherin 13, humanhuman

TSL 5 BASIC

Gene CDH13, Length 810 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-207ENST00000565636 EVA1CP58658 441 aa12.02□□□□□ -0.49
CDH13-207ENST00000565636 FAM161AQ3B820 660 aa12.02□□□□□ -0.49
CDH13-207ENST00000565636 ACEP12821 1306 aa12.02□□□□□ -0.49
CDH13-207ENST00000565636 KIAA0232Q92628 1395 aa12.02□□□□□ -0.49
CDH13-207ENST00000565636 CFHP08603 1231 aa12.01□□□□□ -0.49
CDH13-207ENST00000565636 PDE3BQ13370 1112 aa12.01□□□□□ -0.49
CDH13-207ENST00000565636 NBPF14Q5TI25 921 aa12.01□□□□□ -0.49
CDH13-207ENST00000565636 BLOC1S3Q6QNY0 202 aa12.01□□□□□ -0.49
CDH13-207ENST00000565636 TCP11L2Q8N4U5 519 aa12.01□□□□□ -0.49
CDH13-207ENST00000565636 ABTB2Q8N961 1025 aa12.01□□□□□ -0.49
CDH13-207ENST00000565636 PXYLP1Q8TE99 480 aa12.01□□□□□ -0.49
CDH13-207ENST00000565636 USP19O94966 1318 aa12.01□□□□□ -0.49
CDH13-207ENST00000565636 PARP4Q9UKK3 1724 aaKnown RBP12□□□□□ -0.49
CDH13-207ENST00000565636 RGPD3A6NKT7 1758 aaPredicted RBP12□□□□□ -0.49
CDH13-207ENST00000565636 RGPD4Q7Z3J3 1758 aa12□□□□□ -0.49
CDH13-207ENST00000565636 LMO7Q8WWI1 1683 aa12□□□□□ -0.49
CDH13-207ENST00000565636 CDCA7Q9BWT1 371 aaPredicted RBP11.99□□□□□ -0.49
CDH13-207ENST00000565636 SSH2Q76I76 1423 aa11.99□□□□□ -0.49
CDH13-207ENST00000565636 RREB1Q92766 1687 aa11.99□□□□□ -0.49
CDH13-207ENST00000565636 SBF2Q86WG5 1849 aa11.98□□□□□ -0.49
CDH13-207ENST00000565636 CAMTA1Q9Y6Y1 1673 aa11.98□□□□□ -0.49
CDH13-207ENST00000565636 PLSCR1O15162 318 aa11.98□□□□□ -0.49
CDH13-207ENST00000565636 GNPATO15228 680 aa11.98□□□□□ -0.49
CDH13-207ENST00000565636 NR1I2O75469 434 aa11.98□□□□□ -0.49
CDH13-207ENST00000565636 GCP02774 474 aa11.98□□□□□ -0.49
CDH13-207ENST00000565636 RBM26Q5T8P6 1007 aaKnown RBP11.98□□□□□ -0.49
CDH13-207ENST00000565636 BCL9O00512 1426 aa11.97□□□□□ -0.49
CDH13-207ENST00000565636 AATKQ6ZMQ8 1374 aa11.97□□□□□ -0.49
CDH13-207ENST00000565636 APBA3O96018 575 aa11.97□□□□□ -0.49
CDH13-207ENST00000565636 ZC3H6P61129 1189 aaKnown RBP11.97□□□□□ -0.49
CDH13-207ENST00000565636 METTL3Q86U44 580 aaKnown RBP11.97□□□□□ -0.49
CDH13-207ENST00000565636 NRKQ7Z2Y5 1582 aa11.96□□□□□ -0.49
CDH13-207ENST00000565636 CENPJQ9HC77 1338 aaPredicted RBP11.96□□□□□ -0.49
CDH13-207ENST00000565636 NRG2O14511 850 aaPredicted RBP11.96□□□□□ -0.49
CDH13-207ENST00000565636 TRIM37O94972 964 aa11.96□□□□□ -0.49
CDH13-207ENST00000565636 EZH2Q15910 746 aaKnown RBP11.96□□□□□ -0.49
CDH13-207ENST00000565636 CRB1P82279 1406 aa11.95□□□□□ -0.5
CDH13-207ENST00000565636 TULP1O00294 542 aaPredicted RBP11.95□□□□□ -0.5
CDH13-207ENST00000565636 R3HDM1Q15032 1099 aaKnown RBP11.95□□□□□ -0.5
CDH13-207ENST00000565636 CHRNA2Q15822 529 aa11.95□□□□□ -0.5
CDH13-207ENST00000565636 STRN4Q9NRL3 753 aa11.95□□□□□ -0.5
CDH13-207ENST00000565636 SRPK2P78362 688 aaKnown RBP11.94□□□□□ -0.5
CDH13-207ENST00000565636 KCNH5Q8NCM2 988 aa11.94□□□□□ -0.5
CDH13-207ENST00000565636 NUP188Q5SRE5 1749 aa11.94□□□□□ -0.5
CDH13-207ENST00000565636 PPIP5K1Q6PFW1 1433 aa11.94□□□□□ -0.5
CDH13-207ENST00000565636 EVC2Q86UK5 1308 aa11.93□□□□□ -0.5
CDH13-207ENST00000565636 COL18A1P39060 1754 aa11.93□□□□□ -0.5
CDH13-207ENST00000565636 SLC10A3P09131 477 aa11.93□□□□□ -0.5
CDH13-207ENST00000565636 LARP1Q6PKG0 1096 aaKnown RBP11.93□□□□□ -0.5
CDH13-207ENST00000565636 COL5A2P05997 1499 aaPredicted RBP11.93□□□□□ -0.5
CDH13-207ENST00000565636 SLIT3O75094 1523 aa11.92□□□□□ -0.5
CDH13-207ENST00000565636 PEAK1Q9H792 1746 aa11.92□□□□□ -0.5
CDH13-207ENST00000565636 QRICH2Q9H0J4 1663 aa11.92□□□□□ -0.5
CDH13-207ENST00000565636 NBPF1Q3BBV0 1214 aa11.92□□□□□ -0.5
CDH13-207ENST00000565636 FAM182BQ5T319 152 aa11.92□□□□□ -0.5
CDH13-207ENST00000565636 OVOS2A0A0G2JMS6 1433 aa11.92□□□□□ -0.5
CDH13-207ENST00000565636 OVOS2A0A0J9YW53 1432 aa11.92□□□□□ -0.5
CDH13-207ENST00000565636 USP6P35125 1406 aa11.92□□□□□ -0.5
CDH13-207ENST00000565636 OVOS2Q6IE36 1432 aa11.92□□□□□ -0.5
CDH13-207ENST00000565636 ABCC6O95255 1503 aa11.91□□□□□ -0.5
CDH13-207ENST00000565636 TTC21AQ8NDW8 1320 aa11.91□□□□□ -0.5
CDH13-207ENST00000565636 TRAF7Q6Q0C0 670 aa11.91□□□□□ -0.5
CDH13-207ENST00000565636 SPON1Q9HCB6 807 aa11.91□□□□□ -0.5
CDH13-207ENST00000565636 DAXXQ9UER7 740 aaPredicted RBP11.91□□□□□ -0.5
CDH13-207ENST00000565636 PDZRN3Q9UPQ7 1066 aa11.91□□□□□ -0.5
CDH13-207ENST00000565636 AKAP12Q02952 1782 aa11.91□□□□□ -0.5
CDH13-207ENST00000565636 TRPM1Q7Z4N2 1603 aa11.9□□□□□ -0.5
CDH13-207ENST00000565636 RNF223E7ERA6 249 aa11.9□□□□□ -0.5
CDH13-207ENST00000565636 KCNQ2O43526 872 aa11.9□□□□□ -0.5
CDH13-207ENST00000565636 SLC24A1O60721 1099 aa11.9□□□□□ -0.5
CDH13-207ENST00000565636 DDB1Q16531 1140 aa11.9□□□□□ -0.5
CDH13-207ENST00000565636 NUTM2GQ5VZR2 741 aa11.9□□□□□ -0.5
CDH13-207ENST00000565636 GPIHBP1Q8IV16 184 aa11.9□□□□□ -0.5
CDH13-207ENST00000565636 ANKLE1Q8NAG6 615 aa11.9□□□□□ -0.5
CDH13-207ENST00000565636 RDH13Q8NBN7 331 aa11.9□□□□□ -0.5
CDH13-207ENST00000565636 CABP1Q9NZU7 370 aa11.9□□□□□ -0.5
CDH13-207ENST00000565636 USP35Q9P2H5 1018 aa11.9□□□□□ -0.5
CDH13-207ENST00000565636 WNK3Q9BYP7 1800 aa11.9□□□□□ -0.5
CDH13-207ENST00000565636 KAT6BQ8WYB5 2073 aa11.9□□□□□ -0.51
CDH13-207ENST00000565636 WDR17Q8IZU2 1322 aa11.89□□□□□ -0.51
CDH13-207ENST00000565636 TLL1O43897 1013 aa11.89□□□□□ -0.51
CDH13-207ENST00000565636 ADH1BP00325 375 aa11.89□□□□□ -0.51
CDH13-207ENST00000565636 SLC19A1P41440 591 aa11.89□□□□□ -0.51
CDH13-207ENST00000565636 ARHGEF25Q86VW2 580 aa11.89□□□□□ -0.51
CDH13-207ENST00000565636 SULF1Q8IWU6 871 aa11.89□□□□□ -0.51
CDH13-207ENST00000565636 PUS7Q96PZ0 661 aaKnown RBP11.89□□□□□ -0.51
CDH13-207ENST00000565636 NINLQ9Y2I6 1382 aa11.89□□□□□ -0.51
CDH13-207ENST00000565636 RGPD5Q99666 1765 aa11.88□□□□□ -0.51
CDH13-207ENST00000565636 CARD10Q9BWT7 1032 aa11.88□□□□□ -0.51
CDH13-207ENST00000565636 SBNO2Q9Y2G9 1366 aa11.88□□□□□ -0.51
CDH13-207ENST00000565636 USP54Q70EL1 1684 aa11.87□□□□□ -0.51
CDH13-207ENST00000565636 CPSF1Q10570 1443 aaKnown RBP11.86□□□□□ -0.51
CDH13-207ENST00000565636 EXOC5O00471 708 aa11.86□□□□□ -0.51
CDH13-207ENST00000565636 S1PR4O95977 384 aa11.86□□□□□ -0.51
CDH13-207ENST00000565636 TOM1L2Q6ZVM7 507 aa11.86□□□□□ -0.51
CDH13-207ENST00000565636 SCUBE3Q8IX30 993 aa11.86□□□□□ -0.51
CDH13-207ENST00000565636 SLC6A16Q9GZN6 736 aa11.86□□□□□ -0.51
CDH13-207ENST00000565636 CCDC7Q96M83 1385 aa11.86□□□□□ -0.51
CDH13-207ENST00000565636 PIK3C2AO00443 1686 aa11.86□□□□□ -0.51
CDH13-207ENST00000565636 CHD4Q14839 1912 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms