RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 PAPPAQ13219 1627 aa24.47■■□□□ 1.51
CSPG4P13-201ENST00000565545 PNPLA7Q6ZV29 1317 aa24.47■■□□□ 1.51
CSPG4P13-201ENST00000565545 SSH1Q8WYL5 1049 aa24.47■■□□□ 1.51
CSPG4P13-201ENST00000565545 CHMP4AQ9BY43 222 aa24.47■■□□□ 1.51
CSPG4P13-201ENST00000565545 SMC4Q9NTJ3 1288 aa24.47■■□□□ 1.51
CSPG4P13-201ENST00000565545 MSH5O43196 834 aa24.45■■□□□ 1.5
CSPG4P13-201ENST00000565545 KIF16BQ96L93 1317 aa24.44■■□□□ 1.5
CSPG4P13-201ENST00000565545 ELL2O00472 640 aaPredicted RBP24.44■■□□□ 1.5
CSPG4P13-201ENST00000565545 HOXB7P09629 217 aa24.44■■□□□ 1.5
CSPG4P13-201ENST00000565545 MS4A1P11836 297 aa24.44■■□□□ 1.5
CSPG4P13-201ENST00000565545 CABP4P57796 275 aa24.44■■□□□ 1.5
CSPG4P13-201ENST00000565545 IRX6P78412 446 aaPredicted RBP24.44■■□□□ 1.5
CSPG4P13-201ENST00000565545 PDE3AQ14432 1141 aa24.44■■□□□ 1.5
CSPG4P13-201ENST00000565545 CCNL1Q9UK58 526 aaPredicted RBP24.44■■□□□ 1.5
CSPG4P13-201ENST00000565545 PLIN1O60240 522 aa24.43■■□□□ 1.5
CSPG4P13-201ENST00000565545 CANXP27824 592 aaKnown RBP24.43■■□□□ 1.5
CSPG4P13-201ENST00000565545 EIF4A1P60842 406 aaKnown RBP24.43■■□□□ 1.5
CSPG4P13-201ENST00000565545 CACNA1FO60840 1977 aa24.42■■□□□ 1.5
CSPG4P13-201ENST00000565545 IPO8O15397 1037 aaKnown RBP24.42■■□□□ 1.5
CSPG4P13-201ENST00000565545 NFATC2IPQ8NCF5 419 aa24.42■■□□□ 1.5
CSPG4P13-201ENST00000565545 ZKSCAN2Q63HK3 967 aa24.41■■□□□ 1.5
CSPG4P13-201ENST00000565545 C1QTNF8P60827 252 aa24.4■■□□□ 1.5
CSPG4P13-201ENST00000565545 KRT24Q2M2I5 525 aa24.4■■□□□ 1.5
CSPG4P13-201ENST00000565545 MRPL50Q8N5N7 158 aaKnown RBP24.4■■□□□ 1.5
CSPG4P13-201ENST00000565545 BCL2L13Q9BXK5 485 aa24.4■■□□□ 1.5
CSPG4P13-201ENST00000565545 ZNF790Q6PG37 636 aa24.39■■□□□ 1.49
CSPG4P13-201ENST00000565545 ARHGAP45Q92619 1136 aa24.39■■□□□ 1.49
CSPG4P13-201ENST00000565545 FRAT1Q92837 279 aaPredicted RBP24.39■■□□□ 1.49
CSPG4P13-201ENST00000565545 HEG1Q9ULI3 1381 aa24.39■■□□□ 1.49
CSPG4P13-201ENST00000565545 CCDC30Q5VVM6 783 aa24.37■■□□□ 1.49
CSPG4P13-201ENST00000565545 NLGN2Q8NFZ4 835 aa24.37■■□□□ 1.49
CSPG4P13-201ENST00000565545 TOGARAM1Q9Y4F4 1720 aa24.37■■□□□ 1.49
CSPG4P13-201ENST00000565545 KCNQ3O43525 872 aa24.36■■□□□ 1.49
CSPG4P13-201ENST00000565545 TTC5Q8N0Z6 440 aa24.36■■□□□ 1.49
CSPG4P13-201ENST00000565545 ATF7IPQ6VMQ6 1270 aa24.35■■□□□ 1.49
CSPG4P13-201ENST00000565545 COL23A1Q86Y22 540 aaPredicted RBP24.35■■□□□ 1.49
CSPG4P13-201ENST00000565545 NOB1Q9ULX3 412 aaKnown RBP24.35■■□□□ 1.49
CSPG4P13-201ENST00000565545 UTRNP46939 3433 aa24.35■■□□□ 1.49
CSPG4P13-201ENST00000565545 ITGB4P16144 1822 aa24.34■■□□□ 1.49
CSPG4P13-201ENST00000565545 STK31Q9BXU1 1019 aa24.34■■□□□ 1.49
CSPG4P13-201ENST00000565545 PPP4R2Q9NY27 417 aa24.34■■□□□ 1.49
CSPG4P13-201ENST00000565545 CHD4Q14839 1912 aa24.33■■□□□ 1.49
CSPG4P13-201ENST00000565545 C20orf194Q5TEA3 1177 aa24.33■■□□□ 1.49
CSPG4P13-201ENST00000565545 TMOD3Q9NYL9 352 aa24.33■■□□□ 1.49
CSPG4P13-201ENST00000565545 GRIN3BO60391 1043 aa24.32■■□□□ 1.48
CSPG4P13-201ENST00000565545 GIGYF1O75420 1035 aaPredicted RBP24.32■■□□□ 1.48
CSPG4P13-201ENST00000565545 HMGB2P26583 209 aaKnown RBP24.32■■□□□ 1.48
CSPG4P13-201ENST00000565545 MSL1Q68DK7 614 aa24.32■■□□□ 1.48
CSPG4P13-201ENST00000565545 FMNL2Q96PY5 1086 aa24.32■■□□□ 1.48
CSPG4P13-201ENST00000565545 CRBNQ96SW2 442 aa24.32■■□□□ 1.48
CSPG4P13-201ENST00000565545 UBR2Q8IWV8 1755 aa24.31■■□□□ 1.48
CSPG4P13-201ENST00000565545 SLC39A6Q13433 755 aa24.31■■□□□ 1.48
CSPG4P13-201ENST00000565545 HDGFL1Q5TGJ6 251 aa24.31■■□□□ 1.48
CSPG4P13-201ENST00000565545 DZIP1LQ8IYY4 767 aaKnown RBP24.31■■□□□ 1.48
CSPG4P13-201ENST00000565545 EXOC6Q8TAG9 804 aa24.31■■□□□ 1.48
CSPG4P13-201ENST00000565545 API5Q9BZZ5 524 aaKnown RBP24.31■■□□□ 1.48
CSPG4P13-201ENST00000565545 PTPRCP08575 1304 aa24.31■■□□□ 1.48
CSPG4P13-201ENST00000565545 TRIM27P14373 513 aa24.3■■□□□ 1.48
CSPG4P13-201ENST00000565545 DOT1LQ8TEK3 1739 aa24.3■■□□□ 1.48
CSPG4P13-201ENST00000565545 SLC4A2P04920 1241 aa24.29■■□□□ 1.48
CSPG4P13-201ENST00000565545 AAMPQ13685 434 aa24.29■■□□□ 1.48
CSPG4P13-201ENST00000565545 FTSJ3Q8IY81 847 aaKnown RBP24.29■■□□□ 1.48
CSPG4P13-201ENST00000565545 TCERG1O14776 1098 aaKnown RBP24.28■■□□□ 1.48
CSPG4P13-201ENST00000565545 SNRPA1P09661 255 aaKnown RBP24.28■■□□□ 1.48
CSPG4P13-201ENST00000565545 FLAD1Q8NFF5 587 aa24.28■■□□□ 1.48
CSPG4P13-201ENST00000565545 QSER1Q2KHR3 1735 aa24.27■■□□□ 1.48
CSPG4P13-201ENST00000565545 YBX3P16989 372 aaKnown RBP eCLIP24.27■■□□□ 1.48
CSPG4P13-201ENST00000565545 PANK1Q8TE04 598 aa24.27■■□□□ 1.48
CSPG4P13-201ENST00000565545 ZNF496Q96IT1 587 aaPredicted RBP24.27■■□□□ 1.48
CSPG4P13-201ENST00000565545 PIGBQ92521 554 aa24.25■■□□□ 1.47
CSPG4P13-201ENST00000565545 PALLDQ8WX93 1383 aa24.25■■□□□ 1.47
CSPG4P13-201ENST00000565545 LY75O60449 1722 aa24.24■■□□□ 1.47
CSPG4P13-201ENST00000565545 LAMB4A4D0S4 1761 aa24.24■■□□□ 1.47
CSPG4P13-201ENST00000565545 EIF2S2P20042 333 aaKnown RBP24.24■■□□□ 1.47
CSPG4P13-201ENST00000565545 SMARCC1Q92922 1105 aaPredicted RBP24.24■■□□□ 1.47
CSPG4P13-201ENST00000565545 DBF4Q9UBU7 674 aaPredicted RBP24.24■■□□□ 1.47
CSPG4P13-201ENST00000565545 KCPQ6ZWJ8 1503 aa24.24■■□□□ 1.47
CSPG4P13-201ENST00000565545 C5P01031 1676 aa24.24■■□□□ 1.47
CSPG4P13-201ENST00000565545 RLBP1P12271 317 aa24.23■■□□□ 1.47
CSPG4P13-201ENST00000565545 MVPQ14764 893 aaKnown RBP24.23■■□□□ 1.47
CSPG4P13-201ENST00000565545 CLUAP1Q96AJ1 413 aa24.23■■□□□ 1.47
CSPG4P13-201ENST00000565545 CD2APQ9Y5K6 639 aa24.23■■□□□ 1.47
CSPG4P13-201ENST00000565545 ABCC4O15439 1325 aa24.22■■□□□ 1.47
CSPG4P13-201ENST00000565545 AK7Q96M32 723 aa24.22■■□□□ 1.47
CSPG4P13-201ENST00000565545 CHMP4BQ9H444 224 aaKnown RBP24.22■■□□□ 1.47
CSPG4P13-201ENST00000565545 TNNQ9UQP3 1299 aa24.22■■□□□ 1.47
CSPG4P13-201ENST00000565545 COG6Q9Y2V7 657 aa24.22■■□□□ 1.47
CSPG4P13-201ENST00000565545 VSIG10Q8N0Z9 540 aa24.21■■□□□ 1.47
CSPG4P13-201ENST00000565545 NECTIN2Q92692 538 aa24.21■■□□□ 1.47
CSPG4P13-201ENST00000565545 DDX19BQ9UMR2 479 aa24.21■■□□□ 1.47
CSPG4P13-201ENST00000565545 TUBGCP6Q96RT7 1819 aa24.21■■□□□ 1.47
CSPG4P13-201ENST00000565545 COL24A1Q17RW2 1714 aa24.21■■□□□ 1.47
CSPG4P13-201ENST00000565545 FLIIQ13045 1269 aa24.2■■□□□ 1.46
CSPG4P13-201ENST00000565545 TEX13AQ9BXU3 409 aaPredicted RBP24.2■■□□□ 1.46
CSPG4P13-201ENST00000565545 ATG3Q9NT62 314 aa24.2■■□□□ 1.46
CSPG4P13-201ENST00000565545 ERBB4Q15303 1308 aa24.19■■□□□ 1.46
CSPG4P13-201ENST00000565545 DDX21Q9NR30 783 aaKnown RBP eCLIP24.19■■□□□ 1.46
CSPG4P13-201ENST00000565545 HYPKQ9NX55 129 aa24.19■■□□□ 1.46
CSPG4P13-201ENST00000565545 CHPF2Q9P2E5 772 aa24.19■■□□□ 1.46
CSPG4P13-201ENST00000565545 PHF14O94880 888 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms