RNA–Protein interactions for RNA: ENST00000564600.6

CHD9-211, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-211ENST00000564600 USP3Q9Y6I4 520 aa6.89□□□□□ -1.31
CHD9-211ENST00000564600 KRTAP9-2Q9BYQ4 174 aa6.88□□□□□ -1.31
CHD9-211ENST00000564600 SERTAD1Q9UHV2 236 aa6.88□□□□□ -1.31
CHD9-211ENST00000564600 DOLKQ9UPQ8 538 aa6.88□□□□□ -1.31
CHD9-211ENST00000564600 ZNF330Q9Y3S2 320 aaPredicted RBP6.88□□□□□ -1.31
CHD9-211ENST00000564600 KRTAP9-6A0A140TA67 174 aa6.87□□□□□ -1.31
CHD9-211ENST00000564600 APBB1O00213 710 aa6.87□□□□□ -1.31
CHD9-211ENST00000564600 KHNYNO15037 678 aaKnown RBP6.87□□□□□ -1.31
CHD9-211ENST00000564600 SCNN1DP51172 638 aa6.87□□□□□ -1.31
CHD9-211ENST00000564600 TBC1D9Q6ZT07 1266 aa6.87□□□□□ -1.31
CHD9-211ENST00000564600 PPARGC1BQ86YN6 1023 aaKnown RBP6.87□□□□□ -1.31
CHD9-211ENST00000564600 CCDC125Q86Z20 511 aa6.87□□□□□ -1.31
CHD9-211ENST00000564600 TRIM11Q96F44 468 aa6.87□□□□□ -1.31
CHD9-211ENST00000564600 CRISPLD1Q9H336 500 aa6.87□□□□□ -1.31
CHD9-211ENST00000564600 PARP3Q9Y6F1 533 aa6.87□□□□□ -1.31
CHD9-211ENST00000564600 FAM229AH3BQW9 127 aa6.86□□□□□ -1.31
CHD9-211ENST00000564600 ATXN7O15265 892 aaPredicted RBP6.86□□□□□ -1.31
CHD9-211ENST00000564600 MAPTP10636 758 aaKnown RBP6.86□□□□□ -1.31
CHD9-211ENST00000564600 MCCD1P59942 119 aaPredicted RBP6.86□□□□□ -1.31
CHD9-211ENST00000564600 ESCO1Q5FWF5 840 aa6.86□□□□□ -1.31
CHD9-211ENST00000564600 STRN4Q9NRL3 753 aa6.86□□□□□ -1.31
CHD9-211ENST00000564600 PCDHGC4Q9Y5F7 938 aa6.86□□□□□ -1.31
CHD9-211ENST00000564600 A0A1W2PNR3 127 aa6.85□□□□□ -1.31
CHD9-211ENST00000564600 ARAFP10398 606 aa6.85□□□□□ -1.31
CHD9-211ENST00000564600 GDF10P55107 478 aa6.85□□□□□ -1.31
CHD9-211ENST00000564600 LBRQ14739 615 aaKnown RBP6.85□□□□□ -1.31
CHD9-211ENST00000564600 FOXD4L6Q3SYB3 417 aaPredicted RBP6.85□□□□□ -1.31
CHD9-211ENST00000564600 FOXD4L3Q6VB84 417 aaPredicted RBP6.85□□□□□ -1.31
CHD9-211ENST00000564600 PHTF2Q8N3S3 785 aa6.85□□□□□ -1.31
CHD9-211ENST00000564600 PLVAPQ9BX97 442 aa6.85□□□□□ -1.31
CHD9-211ENST00000564600 TNP2Q05952 138 aa6.84□□□□□ -1.31
CHD9-211ENST00000564600 ARSJQ5FYB0 599 aaPredicted RBP6.84□□□□□ -1.31
CHD9-211ENST00000564600 ZMYM1Q5SVZ6 1142 aa6.84□□□□□ -1.31
CHD9-211ENST00000564600 ALYREFQ86V81 257 aaKnown RBP6.83□□□□□ -1.32
CHD9-211ENST00000564600 INHAP05111 366 aa6.82□□□□□ -1.32
CHD9-211ENST00000564600 USP4Q13107 963 aa6.82□□□□□ -1.32
CHD9-211ENST00000564600 SLFNL1Q499Z3 407 aa6.82□□□□□ -1.32
CHD9-211ENST00000564600 C8orf86Q6ZUL3 223 aa6.82□□□□□ -1.32
CHD9-211ENST00000564600 PRM3Q9NNZ6 103 aa6.82□□□□□ -1.32
CHD9-211ENST00000564600 POM121CA8CG34 1229 aa6.81□□□□□ -1.32
CHD9-211ENST00000564600 ADH6P28332 368 aa6.81□□□□□ -1.32
CHD9-211ENST00000564600 GATA4P43694 442 aa6.81□□□□□ -1.32
CHD9-211ENST00000564600 FIGNL1Q6PIW4 674 aa6.81□□□□□ -1.32
CHD9-211ENST00000564600 CLUAP1Q96AJ1 413 aa6.81□□□□□ -1.32
CHD9-211ENST00000564600 NOP53Q9NZM5 478 aaKnown RBP6.81□□□□□ -1.32
CHD9-211ENST00000564600 PIK3CDO00329 1044 aa6.8□□□□□ -1.32
CHD9-211ENST00000564600 TXLNAP40222 546 aa6.8□□□□□ -1.32
CHD9-211ENST00000564600 SMTNP53814 917 aa6.8□□□□□ -1.32
CHD9-211ENST00000564600 EIF4G2P78344 907 aaKnown RBP eCLIP6.8□□□□□ -1.32
CHD9-211ENST00000564600 RSPO4Q2I0M5 234 aaPredicted RBP6.8□□□□□ -1.32
CHD9-211ENST00000564600 ZNF295-AS1Q8N0V1 137 aa6.8□□□□□ -1.32
CHD9-211ENST00000564600 ADAMTS19Q8TE59 1207 aa6.8□□□□□ -1.32
CHD9-211ENST00000564600 ZIC5Q96T25 663 aa6.8□□□□□ -1.32
CHD9-211ENST00000564600 NIFKQ9BYG3 293 aaKnown RBP6.8□□□□□ -1.32
CHD9-211ENST00000564600 CABP1Q9NZU7 370 aa6.8□□□□□ -1.32
CHD9-211ENST00000564600 PRR12Q9ULL5 1215 aa6.8□□□□□ -1.32
CHD9-211ENST00000564600 SCO2A0A1W2PP80 73 aa6.79□□□□□ -1.32
CHD9-211ENST00000564600 TMEM229AB2RXF0 380 aa6.79□□□□□ -1.32
CHD9-211ENST00000564600 UBTFP17480 764 aaKnown RBP6.79□□□□□ -1.32
CHD9-211ENST00000564600 TBCELQ5QJ74 424 aa6.79□□□□□ -1.32
CHD9-211ENST00000564600 RAB44Q7Z6P3 723 aaPredicted RBP6.79□□□□□ -1.32
CHD9-211ENST00000564600 ZNF592Q92610 1267 aa6.79□□□□□ -1.32
CHD9-211ENST00000564600 TPSG1Q9NRR2 321 aa6.79□□□□□ -1.32
CHD9-211ENST00000564600 FLIIQ13045 1269 aa6.78□□□□□ -1.32
CHD9-211ENST00000564600 WASHC4Q2M389 1173 aa6.78□□□□□ -1.32
CHD9-211ENST00000564600 NLRP8Q86W28 1048 aa6.78□□□□□ -1.32
CHD9-211ENST00000564600 ALG2Q9H553 416 aa6.78□□□□□ -1.32
CHD9-211ENST00000564600 CHIC2Q9UKJ5 165 aa6.78□□□□□ -1.32
CHD9-211ENST00000564600 GJA3Q9Y6H8 435 aa6.78□□□□□ -1.32
CHD9-211ENST00000564600 ZNF468Q5VIY5 522 aaPredicted RBP6.77□□□□□ -1.33
CHD9-211ENST00000564600 BICDL1Q6ZP65 573 aa6.77□□□□□ -1.33
CHD9-211ENST00000564600 SYT9Q86SS6 491 aa6.77□□□□□ -1.33
CHD9-211ENST00000564600 IQSEC3Q9UPP2 1182 aaPredicted RBP6.77□□□□□ -1.33
CHD9-211ENST00000564600 PIK3R2O00459 728 aa6.76□□□□□ -1.33
CHD9-211ENST00000564600 SPATA31C1P0DKV0 1188 aa6.76□□□□□ -1.33
CHD9-211ENST00000564600 SEMA3FQ13275 785 aa6.76□□□□□ -1.33
CHD9-211ENST00000564600 GRIK4Q16099 956 aa6.76□□□□□ -1.33
CHD9-211ENST00000564600 NKAPLQ5M9Q1 402 aa6.76□□□□□ -1.33
CHD9-211ENST00000564600 SH3PXD2AQ5TCZ1 1133 aa6.76□□□□□ -1.33
CHD9-211ENST00000564600 LRRC69Q6ZNQ3 347 aa6.76□□□□□ -1.33
CHD9-211ENST00000564600 PLPP7Q8NBV4 271 aa6.76□□□□□ -1.33
CHD9-211ENST00000564600 ZDHHC1Q8WTX9 485 aa6.76□□□□□ -1.33
CHD9-211ENST00000564600 A6NJY4 79 aa6.75□□□□□ -1.33
CHD9-211ENST00000564600 TATP17735 454 aaPredicted RBP6.75□□□□□ -1.33
CHD9-211ENST00000564600 SFSWAPQ12872 951 aaKnown RBP6.75□□□□□ -1.33
CHD9-211ENST00000564600 NBPF1Q3BBV0 1214 aa6.75□□□□□ -1.33
CHD9-211ENST00000564600 KRTAP1-3Q8IUG1 177 aa6.75□□□□□ -1.33
CHD9-211ENST00000564600 FNBP4Q8N3X1 1017 aaPredicted RBP6.75□□□□□ -1.33
CHD9-211ENST00000564600 SLC30A3Q99726 388 aa6.75□□□□□ -1.33
CHD9-211ENST00000564600 MARK1Q9P0L2 795 aa6.75□□□□□ -1.33
CHD9-211ENST00000564600 M0R082 166 aa6.74□□□□□ -1.33
CHD9-211ENST00000564600 RAD21O60216 631 aa6.74□□□□□ -1.33
CHD9-211ENST00000564600 FAM157BP0CG42 384 aa6.74□□□□□ -1.33
CHD9-211ENST00000564600 FAM182BQ5T319 152 aa6.74□□□□□ -1.33
CHD9-211ENST00000564600 C1orf216Q8TAB5 229 aa6.74□□□□□ -1.33
CHD9-211ENST00000564600 ZNF417Q8TAU3 575 aa6.74□□□□□ -1.33
CHD9-211ENST00000564600 ZNF587Q96SQ5 575 aaPredicted RBP6.74□□□□□ -1.33
CHD9-211ENST00000564600 ELOA3CA0A087WX78 387 aaPredicted RBP6.73□□□□□ -1.33
CHD9-211ENST00000564600 ELOA3DA6NLF2 546 aaPredicted RBP6.73□□□□□ -1.33
CHD9-211ENST00000564600 ALBP02768 609 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms