RNA–Protein interactions for RNA: ENST00000563888.6

TCF4-221, Transcript of transcription factor 4, humanhuman

TSL 4

Gene TCF4, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-221ENST00000563888 COL5A2P05997 1499 aaPredicted RBP10.74□□□□□ -0.69
TCF4-221ENST00000563888 PTPREP23469 700 aa10.73□□□□□ -0.69
TCF4-221ENST00000563888 FAM161AQ3B820 660 aa10.73□□□□□ -0.69
TCF4-221ENST00000563888 VARS2Q5ST30 1063 aaKnown RBP10.73□□□□□ -0.69
TCF4-221ENST00000563888 CDCA7LQ96GN5 454 aa10.73□□□□□ -0.69
TCF4-221ENST00000563888 GPCPD1Q9NPB8 672 aa10.73□□□□□ -0.69
TCF4-221ENST00000563888 LRRC4BQ9NT99 713 aa10.73□□□□□ -0.69
TCF4-221ENST00000563888 TFCP2L1Q9NZI6 479 aa10.73□□□□□ -0.69
TCF4-221ENST00000563888 CRYBG1Q9Y4K1 1723 aa10.72□□□□□ -0.69
TCF4-221ENST00000563888 CDCA7Q9BWT1 371 aaPredicted RBP10.72□□□□□ -0.69
TCF4-221ENST00000563888 BCL2L12Q9HB09 334 aa10.72□□□□□ -0.69
TCF4-221ENST00000563888 ACEP12821 1306 aa10.72□□□□□ -0.69
TCF4-221ENST00000563888 PARP4Q9UKK3 1724 aaKnown RBP10.72□□□□□ -0.69
TCF4-221ENST00000563888 CSB-PGBD3P0DP91 1061 aa10.71□□□□□ -0.69
TCF4-221ENST00000563888 AATKQ6ZMQ8 1374 aa10.71□□□□□ -0.69
TCF4-221ENST00000563888 PNPLA7Q6ZV29 1317 aa10.71□□□□□ -0.69
TCF4-221ENST00000563888 METTL3Q86U44 580 aaKnown RBP10.71□□□□□ -0.69
TCF4-221ENST00000563888 NLRP13Q86W25 1043 aa10.71□□□□□ -0.69
TCF4-221ENST00000563888 PPARGC1BQ86YN6 1023 aaKnown RBP10.71□□□□□ -0.69
TCF4-221ENST00000563888 RBM46Q8TBY0 533 aaKnown RBP10.71□□□□□ -0.69
TCF4-221ENST00000563888 KLRG1Q96E93 195 aa10.71□□□□□ -0.69
TCF4-221ENST00000563888 SPATA31E1Q6ZUB1 1445 aa10.7□□□□□ -0.7
TCF4-221ENST00000563888 ADCY9O60503 1353 aa10.7□□□□□ -0.7
TCF4-221ENST00000563888 TOMM70O94826 608 aa10.7□□□□□ -0.7
TCF4-221ENST00000563888 KCNQ4P56696 695 aa10.7□□□□□ -0.7
TCF4-221ENST00000563888 MSL1Q68DK7 614 aa10.7□□□□□ -0.7
TCF4-221ENST00000563888 SPNS2Q8IVW8 549 aa10.7□□□□□ -0.7
TCF4-221ENST00000563888 KRTAP3-3Q9BYR6 98 aa10.7□□□□□ -0.7
TCF4-221ENST00000563888 KRTAP3-2Q9BYR7 98 aa10.7□□□□□ -0.7
TCF4-221ENST00000563888 ADGRG1Q9Y653 693 aa10.7□□□□□ -0.7
TCF4-221ENST00000563888 PHRF1Q9P1Y6 1649 aaKnown RBP10.69□□□□□ -0.7
TCF4-221ENST00000563888 TULP4Q9NRJ4 1543 aa10.69□□□□□ -0.7
TCF4-221ENST00000563888 BCL9O00512 1426 aa10.69□□□□□ -0.7
TCF4-221ENST00000563888 AXIN2Q9Y2T1 843 aa10.69□□□□□ -0.7
TCF4-221ENST00000563888 SBF2Q86WG5 1849 aa10.69□□□□□ -0.7
TCF4-221ENST00000563888 USP19O94966 1318 aa10.68□□□□□ -0.7
TCF4-221ENST00000563888 SSTR3P32745 418 aaPredicted RBP10.68□□□□□ -0.7
TCF4-221ENST00000563888 ZNF687Q8N1G0 1237 aa10.68□□□□□ -0.7
TCF4-221ENST00000563888 JMYQ8N9B5 988 aa10.68□□□□□ -0.7
TCF4-221ENST00000563888 PXYLP1Q8TE99 480 aa10.68□□□□□ -0.7
TCF4-221ENST00000563888 PHOX2BQ99453 314 aa10.68□□□□□ -0.7
TCF4-221ENST00000563888 CDK19Q9BWU1 502 aa10.68□□□□□ -0.7
TCF4-221ENST00000563888 LRRC37A3O60309 1634 aa10.68□□□□□ -0.7
TCF4-221ENST00000563888 LMO7Q8WWI1 1683 aa10.67□□□□□ -0.7
TCF4-221ENST00000563888 WDR17Q8IZU2 1322 aa10.67□□□□□ -0.7
TCF4-221ENST00000563888 PLEKHG3A1L390 1219 aa10.67□□□□□ -0.7
TCF4-221ENST00000563888 PPP1R3GB7ZBB8 358 aa10.67□□□□□ -0.7
TCF4-221ENST00000563888 MS4A1P11836 297 aa10.67□□□□□ -0.7
TCF4-221ENST00000563888 COL9A1P20849 921 aa10.67□□□□□ -0.7
TCF4-221ENST00000563888 REPIN1Q9BWE0 567 aaKnown RBP10.67□□□□□ -0.7
TCF4-221ENST00000563888 PACS2Q86VP3 889 aa10.66□□□□□ -0.7
TCF4-221ENST00000563888 TTC13Q8NBP0 860 aa10.66□□□□□ -0.7
TCF4-221ENST00000563888 CARD10Q9BWT7 1032 aa10.66□□□□□ -0.7
TCF4-221ENST00000563888 USP6P35125 1406 aa10.66□□□□□ -0.7
TCF4-221ENST00000563888 BRD4O60885 1362 aaPredicted RBP10.65□□□□□ -0.7
TCF4-221ENST00000563888 NMRK2Q9NPI5 230 aa10.65□□□□□ -0.7
TCF4-221ENST00000563888 CD2APQ9Y5K6 639 aa10.65□□□□□ -0.7
TCF4-221ENST00000563888 SLC27A3Q5K4L6 730 aa10.64□□□□□ -0.71
TCF4-221ENST00000563888 COL23A1Q86Y22 540 aaPredicted RBP10.64□□□□□ -0.71
TCF4-221ENST00000563888 C16orf71Q8IYS4 520 aaPredicted RBP10.64□□□□□ -0.71
TCF4-221ENST00000563888 NLRP7Q8WX94 980 aa10.64□□□□□ -0.71
TCF4-221ENST00000563888 TMUB1Q9BVT8 246 aa10.64□□□□□ -0.71
TCF4-221ENST00000563888 MMRN1Q13201 1228 aa10.63□□□□□ -0.71
TCF4-221ENST00000563888 PCMTD1Q96MG8 357 aaPredicted RBP10.63□□□□□ -0.71
TCF4-221ENST00000563888 KCNK17Q96T54 332 aa10.63□□□□□ -0.71
TCF4-221ENST00000563888 RSPH6AQ9H0K4 717 aa10.63□□□□□ -0.71
TCF4-221ENST00000563888 POLR3AO14802 1390 aaPredicted RBP10.63□□□□□ -0.71
TCF4-221ENST00000563888 TOPAZ1Q8N9V7 1692 aa10.63□□□□□ -0.71
TCF4-221ENST00000563888 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.62□□□□□ -0.71
TCF4-221ENST00000563888 NBPF26B4DH59 902 aa10.62□□□□□ -0.71
TCF4-221ENST00000563888 HSPA1AP0DMV8 641 aaKnown RBP10.62□□□□□ -0.71
TCF4-221ENST00000563888 HSPA1BP0DMV9 641 aaKnown RBP10.62□□□□□ -0.71
TCF4-221ENST00000563888 SYTL4Q96C24 671 aaPredicted RBP10.62□□□□□ -0.71
TCF4-221ENST00000563888 BEGAINQ9BUH8 593 aa10.62□□□□□ -0.71
TCF4-221ENST00000563888 GOPCQ9HD26 462 aa10.62□□□□□ -0.71
TCF4-221ENST00000563888 FAM217BQ9NTX9 383 aaPredicted RBP10.62□□□□□ -0.71
TCF4-221ENST00000563888 PAPPAQ13219 1627 aa10.62□□□□□ -0.71
TCF4-221ENST00000563888 IGSF1Q8N6C5 1336 aa10.61□□□□□ -0.71
TCF4-221ENST00000563888 NUDT18Q6ZVK8 323 aa10.61□□□□□ -0.71
TCF4-221ENST00000563888 TSKSQ9UJT2 592 aa10.61□□□□□ -0.71
TCF4-221ENST00000563888 PNMA3Q9UL41 463 aa10.61□□□□□ -0.71
TCF4-221ENST00000563888 RCCD1A6NED2 376 aa10.6□□□□□ -0.71
TCF4-221ENST00000563888 TRIM6-TRIM34B2RNG4 842 aa10.6□□□□□ -0.71
TCF4-221ENST00000563888 DDX54Q8TDD1 881 aaKnown RBP10.6□□□□□ -0.71
TCF4-221ENST00000563888 MPHOSPH9Q99550 1183 aa10.6□□□□□ -0.71
TCF4-221ENST00000563888 TATDN2Q93075 761 aa10.59□□□□□ -0.71
TCF4-221ENST00000563888 NLRP2Q9NX02 1062 aa10.59□□□□□ -0.71
TCF4-221ENST00000563888 FAM198AQ9UFP1 575 aa10.59□□□□□ -0.71
TCF4-221ENST00000563888 TNS2Q63HR2 1409 aa10.58□□□□□ -0.72
TCF4-221ENST00000563888 SRPK2P78362 688 aaKnown RBP10.58□□□□□ -0.72
TCF4-221ENST00000563888 ARHGEF25Q86VW2 580 aa10.58□□□□□ -0.72
TCF4-221ENST00000563888 EYA1Q99502 592 aa10.58□□□□□ -0.72
TCF4-221ENST00000563888 CCNL1Q9UK58 526 aaPredicted RBP10.58□□□□□ -0.72
TCF4-221ENST00000563888 AKAP12Q02952 1782 aa10.57□□□□□ -0.72
TCF4-221ENST00000563888 CCDC7Q96M83 1385 aa10.57□□□□□ -0.72
TCF4-221ENST00000563888 IL2RBP14784 551 aa10.57□□□□□ -0.72
TCF4-221ENST00000563888 DNAJB2P25686 324 aa10.57□□□□□ -0.72
TCF4-221ENST00000563888 FSTL1Q12841 308 aa10.57□□□□□ -0.72
TCF4-221ENST00000563888 ARHGAP27Q6ZUM4 889 aa10.57□□□□□ -0.72
TCF4-221ENST00000563888 PPIP5K1Q6PFW1 1433 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms