RNA–Protein interactions for RNA: ENST00000562998.1

CDH11-206, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-206ENST00000562998 POLD1P28340 1107 aa24.6■■□□□ 1.53
CDH11-206ENST00000562998 MSL1Q68DK7 614 aa24.6■■□□□ 1.53
CDH11-206ENST00000562998 MIS18AQ9NYP9 233 aa24.6■■□□□ 1.53
CDH11-206ENST00000562998 ZBTB1Q9Y2K1 713 aa24.6■■□□□ 1.53
CDH11-206ENST00000562998 STARD3NLO95772 234 aa24.59■■□□□ 1.53
CDH11-206ENST00000562998 MRS2Q9HD23 443 aa24.59■■□□□ 1.53
CDH11-206ENST00000562998 SNRPA1P09661 255 aaKnown RBP24.57■■□□□ 1.52
CDH11-206ENST00000562998 GYS1P13807 737 aa24.57■■□□□ 1.52
CDH11-206ENST00000562998 FHDC1Q9C0D6 1143 aaPredicted RBP24.57■■□□□ 1.52
CDH11-206ENST00000562998 BABAM1Q9NWV8 329 aa24.57■■□□□ 1.52
CDH11-206ENST00000562998 USP16Q9Y5T5 823 aa24.57■■□□□ 1.52
CDH11-206ENST00000562998 USP42Q9H9J4 1324 aaKnown RBP24.57■■□□□ 1.52
CDH11-206ENST00000562998 PRAMEF22A3QJZ6 481 aa24.56■■□□□ 1.52
CDH11-206ENST00000562998 APAF1O14727 1248 aa24.56■■□□□ 1.52
CDH11-206ENST00000562998 RFC4P35249 363 aa24.56■■□□□ 1.52
CDH11-206ENST00000562998 EIF5P55010 431 aaKnown RBP24.56■■□□□ 1.52
CDH11-206ENST00000562998 EIF4A1P60842 406 aaKnown RBP24.56■■□□□ 1.52
CDH11-206ENST00000562998 NEUROD2Q15784 382 aa24.56■■□□□ 1.52
CDH11-206ENST00000562998 SYT17Q9BSW7 474 aa24.56■■□□□ 1.52
CDH11-206ENST00000562998 COL15A1P39059 1388 aa24.54■■□□□ 1.52
CDH11-206ENST00000562998 NLGN1Q8N2Q7 840 aa24.54■■□□□ 1.52
CDH11-206ENST00000562998 GIGYF1O75420 1035 aaPredicted RBP24.53■■□□□ 1.52
CDH11-206ENST00000562998 LAMB4A4D0S4 1761 aa24.52■■□□□ 1.52
CDH11-206ENST00000562998 CHL1O00533 1208 aa24.52■■□□□ 1.52
CDH11-206ENST00000562998 A1BGP04217 495 aa24.52■■□□□ 1.52
CDH11-206ENST00000562998 SRP68Q9UHB9 627 aaKnown RBP24.52■■□□□ 1.52
CDH11-206ENST00000562998 CANXP27824 592 aaKnown RBP24.51■■□□□ 1.51
CDH11-206ENST00000562998 IL6STP40189 918 aaPredicted RBP24.51■■□□□ 1.51
CDH11-206ENST00000562998 NARFQ9UHQ1 456 aa24.51■■□□□ 1.51
CDH11-206ENST00000562998 TSPYL4Q9UJ04 414 aa24.5■■□□□ 1.51
CDH11-206ENST00000562998 MMP10P09238 476 aa24.49■■□□□ 1.51
CDH11-206ENST00000562998 FKBP8Q14318 412 aa24.48■■□□□ 1.51
CDH11-206ENST00000562998 NCBP3Q53F19 620 aaKnown RBP24.48■■□□□ 1.51
CDH11-206ENST00000562998 BCL2L12Q9HB09 334 aa24.48■■□□□ 1.51
CDH11-206ENST00000562998 NBPF26B4DH59 902 aa24.47■■□□□ 1.51
CDH11-206ENST00000562998 ZNF853P0CG23 659 aa24.47■■□□□ 1.51
CDH11-206ENST00000562998 USPL1Q5W0Q7 1092 aa24.47■■□□□ 1.51
CDH11-206ENST00000562998 NBPF10Q6P3W6 841 aaKnown RBP24.47■■□□□ 1.51
CDH11-206ENST00000562998 NBPF15Q8N660 670 aa24.47■■□□□ 1.51
CDH11-206ENST00000562998 TM4SF1P30408 202 aa24.46■■□□□ 1.51
CDH11-206ENST00000562998 CFAP44Q96MT7 982 aa24.46■■□□□ 1.51
CDH11-206ENST00000562998 CD2APQ9Y5K6 639 aa24.46■■□□□ 1.51
CDH11-206ENST00000562998 A0A087WZG4 1122 aa24.45■■□□□ 1.5
CDH11-206ENST00000562998 ZPR1O75312 459 aa24.45■■□□□ 1.5
CDH11-206ENST00000562998 CCDC27Q2M243 656 aa24.45■■□□□ 1.5
CDH11-206ENST00000562998 SCN7AQ01118 1682 aa24.45■■□□□ 1.5
CDH11-206ENST00000562998 KIF13BQ9NQT8 1826 aa24.45■■□□□ 1.5
CDH11-206ENST00000562998 PIP4K2AP48426 406 aaPredicted RBP24.43■■□□□ 1.5
CDH11-206ENST00000562998 NLGN2Q8NFZ4 835 aa24.43■■□□□ 1.5
CDH11-206ENST00000562998 DDR1Q08345 913 aa24.42■■□□□ 1.5
CDH11-206ENST00000562998 BCORQ6W2J9 1755 aa24.42■■□□□ 1.5
CDH11-206ENST00000562998 IFT57Q9NWB7 429 aa24.41■■□□□ 1.5
CDH11-206ENST00000562998 TBC1D2BQ9UPU7 963 aa24.41■■□□□ 1.5
CDH11-206ENST00000562998 POLRMTO00411 1230 aaKnown RBP24.4■■□□□ 1.5
CDH11-206ENST00000562998 CAMTA2O94983 1202 aa24.4■■□□□ 1.5
CDH11-206ENST00000562998 CALD1Q05682 793 aaKnown RBP24.4■■□□□ 1.5
CDH11-206ENST00000562998 C10orf71Q711Q0 1435 aa24.4■■□□□ 1.5
CDH11-206ENST00000562998 ERBB4Q15303 1308 aa24.39■■□□□ 1.5
CDH11-206ENST00000562998 KIAA1551Q9HCM1 1747 aa24.39■■□□□ 1.5
CDH11-206ENST00000562998 NRXN2Q9P2S2 1712 aa24.39■■□□□ 1.5
CDH11-206ENST00000562998 NFIXQ14938 502 aa24.39■■□□□ 1.49
CDH11-206ENST00000562998 WWC1Q8IX03 1113 aa24.39■■□□□ 1.49
CDH11-206ENST00000562998 MBIPQ9NS73 344 aa24.39■■□□□ 1.49
CDH11-206ENST00000562998 PARP3Q9Y6F1 533 aa24.39■■□□□ 1.49
CDH11-206ENST00000562998 RGL2O15211 777 aa24.38■■□□□ 1.49
CDH11-206ENST00000562998 KRT24Q2M2I5 525 aa24.38■■□□□ 1.49
CDH11-206ENST00000562998 LRP10Q7Z4F1 713 aa24.38■■□□□ 1.49
CDH11-206ENST00000562998 DZIP3Q86Y13 1208 aaKnown RBP24.38■■□□□ 1.49
CDH11-206ENST00000562998 KLHL34Q8N239 644 aa24.38■■□□□ 1.49
CDH11-206ENST00000562998 LAS1LQ9Y4W2 734 aaKnown RBP24.38■■□□□ 1.49
CDH11-206ENST00000562998 GNAI1P63096 354 aa24.37■■□□□ 1.49
CDH11-206ENST00000562998 PDIA6Q15084 440 aa24.37■■□□□ 1.49
CDH11-206ENST00000562998 ZNF330Q9Y3S2 320 aaPredicted RBP24.37■■□□□ 1.49
CDH11-206ENST00000562998 AFDNP55196 1824 aaKnown RBP24.36■■□□□ 1.49
CDH11-206ENST00000562998 FAM9BQ8IZU0 186 aa24.36■■□□□ 1.49
CDH11-206ENST00000562998 GOLGB1Q14789 3259 aaKnown RBP24.35■■□□□ 1.49
CDH11-206ENST00000562998 CCER2I3L3R5 266 aa24.35■■□□□ 1.49
CDH11-206ENST00000562998 HOXB7P09629 217 aa24.35■■□□□ 1.49
CDH11-206ENST00000562998 TBC1D9BQ66K14 1250 aa24.34■■□□□ 1.49
CDH11-206ENST00000562998 CLEC4GQ6UXB4 293 aa24.34■■□□□ 1.49
CDH11-206ENST00000562998 NPM2Q86SE8 214 aaKnown RBP24.34■■□□□ 1.49
CDH11-206ENST00000562998 PXDNLA1KZ92 1463 aa24.33■■□□□ 1.49
CDH11-206ENST00000562998 UTRNP46939 3433 aa24.33■■□□□ 1.49
CDH11-206ENST00000562998 SENP3-EIF4A1A0A087X0R7 540 aa24.33■■□□□ 1.49
CDH11-206ENST00000562998 IL16Q14005 1332 aa24.33■■□□□ 1.48
CDH11-206ENST00000562998 TGFB2P61812 414 aa24.32■■□□□ 1.48
CDH11-206ENST00000562998 EIF2S2P20042 333 aaKnown RBP24.31■■□□□ 1.48
CDH11-206ENST00000562998 NGEFQ8N5V2 710 aa24.31■■□□□ 1.48
CDH11-206ENST00000562998 SERPINB2P05120 415 aa24.3■■□□□ 1.48
CDH11-206ENST00000562998 PROSER3Q2NL68 480 aa24.3■■□□□ 1.48
CDH11-206ENST00000562998 ERVV-1B6SEH8 477 aa24.29■■□□□ 1.48
CDH11-206ENST00000562998 MYL6BP14649 208 aa24.29■■□□□ 1.48
CDH11-206ENST00000562998 DUSP27Q5VZP5 1158 aa24.29■■□□□ 1.48
CDH11-206ENST00000562998 TTLL7Q6ZT98 887 aa24.29■■□□□ 1.48
CDH11-206ENST00000562998 HLFQ16534 295 aa24.28■■□□□ 1.48
CDH11-206ENST00000562998 BICDL1Q6ZP65 573 aa24.28■■□□□ 1.48
CDH11-206ENST00000562998 WDR63Q8IWG1 891 aa24.28■■□□□ 1.48
CDH11-206ENST00000562998 N4BP2Q86UW6 1770 aaPredicted RBP24.28■■□□□ 1.48
CDH11-206ENST00000562998 MAP3K15Q6ZN16 1313 aa24.28■■□□□ 1.48
CDH11-206ENST00000562998 CARMIL3Q8ND23 1372 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms