RNA–Protein interactions for RNA: ENST00000562806.1

CHD9-207, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 400 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-207ENST00000562806 ITGA6P23229 1130 aa5.72□□□□□ -1.49
CHD9-207ENST00000562806 HIRAP54198 1017 aaPredicted RBP5.72□□□□□ -1.49
CHD9-207ENST00000562806 HIF1AQ16665 826 aa5.72□□□□□ -1.49
CHD9-207ENST00000562806 CDCA8Q53HL2 280 aa5.72□□□□□ -1.49
CHD9-207ENST00000562806 EFHC2Q5JST6 749 aa5.72□□□□□ -1.49
CHD9-207ENST00000562806 C1orf53Q5VUE5 145 aa5.72□□□□□ -1.49
CHD9-207ENST00000562806 TNS4Q8IZW8 715 aa5.72□□□□□ -1.49
CHD9-207ENST00000562806 NANOS1Q8WY41 292 aaKnown RBP5.72□□□□□ -1.49
CHD9-207ENST00000562806 ATAD2Q6PL18 1390 aa5.71□□□□□ -1.5
CHD9-207ENST00000562806 SENP3-EIF4A1A0A087X0R7 540 aa5.71□□□□□ -1.5
CHD9-207ENST00000562806 FOXO3O43524 673 aa5.71□□□□□ -1.5
CHD9-207ENST00000562806 PPP1R12BO60237 982 aaPredicted RBP5.71□□□□□ -1.5
CHD9-207ENST00000562806 STAU1O95793 577 aaKnown RBP5.71□□□□□ -1.5
CHD9-207ENST00000562806 NOS2P35228 1153 aa5.71□□□□□ -1.5
CHD9-207ENST00000562806 PLA2G4AP47712 749 aa5.71□□□□□ -1.5
CHD9-207ENST00000562806 SV2AQ7L0J3 742 aa5.71□□□□□ -1.5
CHD9-207ENST00000562806 TRIM22Q8IYM9 498 aa5.71□□□□□ -1.5
CHD9-207ENST00000562806 TSEN2Q8NCE0 465 aaKnown RBP5.71□□□□□ -1.5
CHD9-207ENST00000562806 VTI1AQ96AJ9 217 aa5.71□□□□□ -1.5
CHD9-207ENST00000562806 WFS1O76024 890 aa5.7□□□□□ -1.5
CHD9-207ENST00000562806 VSIG8P0DPA2 414 aa5.7□□□□□ -1.5
CHD9-207ENST00000562806 FIGNL1Q6PIW4 674 aa5.7□□□□□ -1.5
CHD9-207ENST00000562806 POTEAQ6S8J7 498 aa5.7□□□□□ -1.5
CHD9-207ENST00000562806 NLRP8Q86W28 1048 aa5.7□□□□□ -1.5
CHD9-207ENST00000562806 L3MBTL2Q969R5 705 aa5.7□□□□□ -1.5
CHD9-207ENST00000562806 AIDAQ96BJ3 306 aa5.7□□□□□ -1.5
CHD9-207ENST00000562806 ZNF775Q96BV0 537 aaPredicted RBP5.7□□□□□ -1.5
CHD9-207ENST00000562806 TRERF1Q96PN7 1200 aa5.7□□□□□ -1.5
CHD9-207ENST00000562806 GAS2L1Q99501 681 aaPredicted RBP5.7□□□□□ -1.5
CHD9-207ENST00000562806 TSPAN10Q9H1Z9 355 aaPredicted RBP5.7□□□□□ -1.5
CHD9-207ENST00000562806 CRISPLD1Q9H336 500 aa5.7□□□□□ -1.5
CHD9-207ENST00000562806 ZNF232Q9UNY5 417 aa5.7□□□□□ -1.5
CHD9-207ENST00000562806 PHF24Q9UPV7 400 aa5.7□□□□□ -1.5
CHD9-207ENST00000562806 USTQ9Y2C2 406 aa5.7□□□□□ -1.5
CHD9-207ENST00000562806 MSX1P28360 303 aa5.69□□□□□ -1.5
CHD9-207ENST00000562806 WEE1P30291 646 aa5.69□□□□□ -1.5
CHD9-207ENST00000562806 PHKA2P46019 1235 aa5.69□□□□□ -1.5
CHD9-207ENST00000562806 B4GALNT3Q6L9W6 998 aa5.69□□□□□ -1.5
CHD9-207ENST00000562806 TREML4Q6UXN2 200 aa5.69□□□□□ -1.5
CHD9-207ENST00000562806 RIPOR1Q6ZS17 1223 aa5.69□□□□□ -1.5
CHD9-207ENST00000562806 ZNF295-AS1Q8N0V1 137 aa5.69□□□□□ -1.5
CHD9-207ENST00000562806 SCG3Q8WXD2 468 aaKnown RBP5.69□□□□□ -1.5
CHD9-207ENST00000562806 CLP1Q92989 425 aaKnown RBP5.69□□□□□ -1.5
CHD9-207ENST00000562806 NUCKS1Q9H1E3 243 aaKnown RBP5.69□□□□□ -1.5
CHD9-207ENST00000562806 NEUROD4Q9HD90 331 aa5.69□□□□□ -1.5
CHD9-207ENST00000562806 ANKIB1Q9P2G1 1089 aa5.69□□□□□ -1.5
CHD9-207ENST00000562806 PTCD1O75127 700 aaKnown RBP5.68□□□□□ -1.5
CHD9-207ENST00000562806 NFX1Q12986 1120 aaKnown RBP5.68□□□□□ -1.5
CHD9-207ENST00000562806 COL26A1Q96A83 441 aa5.68□□□□□ -1.5
CHD9-207ENST00000562806 ARID3AQ99856 593 aa5.68□□□□□ -1.5
CHD9-207ENST00000562806 C2orf49Q9BVC5 232 aaPredicted RBP5.68□□□□□ -1.5
CHD9-207ENST00000562806 ZMIZ1Q9ULJ6 1067 aa5.68□□□□□ -1.5
CHD9-207ENST00000562806 GJA3Q9Y6H8 435 aa5.68□□□□□ -1.5
CHD9-207ENST00000562806 EML1O00423 815 aa5.67□□□□□ -1.5
CHD9-207ENST00000562806 ARSJQ5FYB0 599 aaPredicted RBP5.67□□□□□ -1.5
CHD9-207ENST00000562806 TMEM164Q5U3C3 297 aa5.67□□□□□ -1.5
CHD9-207ENST00000562806 BICDL1Q6ZP65 573 aa5.67□□□□□ -1.5
CHD9-207ENST00000562806 STK32AQ8WU08 396 aa5.67□□□□□ -1.5
CHD9-207ENST00000562806 CFHR5Q9BXR6 569 aa5.67□□□□□ -1.5
CHD9-207ENST00000562806 MTMR7Q9Y216 660 aa5.67□□□□□ -1.5
CHD9-207ENST00000562806 CDC14CA4D256 554 aa5.66□□□□□ -1.5
CHD9-207ENST00000562806 C21orf2O43822 256 aa5.66□□□□□ -1.5
CHD9-207ENST00000562806 SAMD5Q5TGI4 173 aa5.66□□□□□ -1.5
CHD9-207ENST00000562806 ZDHHC1Q8WTX9 485 aa5.66□□□□□ -1.5
CHD9-207ENST00000562806 CHMP7Q8WUX9 453 aaPredicted RBP5.66□□□□□ -1.5
CHD9-207ENST00000562806 NSFL1CQ9UNZ2 370 aaKnown RBP5.66□□□□□ -1.5
CHD9-207ENST00000562806 USP3Q9Y6I4 520 aa5.66□□□□□ -1.5
CHD9-207ENST00000562806 A0A1W2PNR3 127 aa5.65□□□□□ -1.5
CHD9-207ENST00000562806 ATP4AP20648 1035 aa5.65□□□□□ -1.5
CHD9-207ENST00000562806 FAM69CQ0P6D2 419 aa5.65□□□□□ -1.5
CHD9-207ENST00000562806 DBN1Q16643 649 aa5.65□□□□□ -1.5
CHD9-207ENST00000562806 RTN1Q16799 776 aa5.65□□□□□ -1.5
CHD9-207ENST00000562806 TBCELQ5QJ74 424 aa5.65□□□□□ -1.5
CHD9-207ENST00000562806 VWA5B2Q8N398 1253 aa5.65□□□□□ -1.5
CHD9-207ENST00000562806 RHPN1Q8TCX5 695 aa5.65□□□□□ -1.5
CHD9-207ENST00000562806 ZNF837Q96EG3 531 aaPredicted RBP5.65□□□□□ -1.5
CHD9-207ENST00000562806 PHACTR1Q9C0D0 580 aa5.65□□□□□ -1.5
CHD9-207ENST00000562806 GPAMQ9HCL2 828 aa5.65□□□□□ -1.5
CHD9-207ENST00000562806 CXXC1Q9P0U4 656 aaPredicted RBP5.65□□□□□ -1.5
CHD9-207ENST00000562806 VEGFBP49765 207 aa5.64□□□□□ -1.51
CHD9-207ENST00000562806 LAMC2Q13753 1193 aa5.64□□□□□ -1.51
CHD9-207ENST00000562806 ALDH16A1Q8IZ83 802 aa5.64□□□□□ -1.51
CHD9-207ENST00000562806 ZIC5Q96T25 663 aa5.64□□□□□ -1.51
CHD9-207ENST00000562806 RUBCNLQ9H714 662 aa5.64□□□□□ -1.51
CHD9-207ENST00000562806 ATXN7L1Q9ULK2 861 aaPredicted RBP5.64□□□□□ -1.51
CHD9-207ENST00000562806 PCDHGC4Q9Y5F7 938 aa5.64□□□□□ -1.51
CHD9-207ENST00000562806 PARP3Q9Y6F1 533 aa5.64□□□□□ -1.51
CHD9-207ENST00000562806 WIPF1O43516 503 aa5.63□□□□□ -1.51
CHD9-207ENST00000562806 PRMT3O60678 531 aa5.63□□□□□ -1.51
CHD9-207ENST00000562806 ATP2B4P23634 1241 aa5.63□□□□□ -1.51
CHD9-207ENST00000562806 TXLNAP40222 546 aa5.63□□□□□ -1.51
CHD9-207ENST00000562806 OCLNQ16625 522 aa5.63□□□□□ -1.51
CHD9-207ENST00000562806 IER5Q5VY09 327 aa5.63□□□□□ -1.51
CHD9-207ENST00000562806 MYO19Q96H55 970 aa5.63□□□□□ -1.51
CHD9-207ENST00000562806 HCN4Q9Y3Q4 1203 aa5.63□□□□□ -1.51
CHD9-207ENST00000562806 TMEM88BA6NKF7 163 aa5.62□□□□□ -1.51
CHD9-207ENST00000562806 ATXN7O15265 892 aaPredicted RBP5.62□□□□□ -1.51
CHD9-207ENST00000562806 FAM157BP0CG42 384 aa5.62□□□□□ -1.51
CHD9-207ENST00000562806 MAP2K3P46734 347 aa5.62□□□□□ -1.51
CHD9-207ENST00000562806 INSM1Q01101 510 aaPredicted RBP5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms