RNA–Protein interactions for RNA: ENST00000562712.5

CDH11-204, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 613 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-204ENST00000562712 CICQ96RK0 1608 aaPredicted RBP16.52■□□□□ 0.24
CDH11-204ENST00000562712 FANCIQ9NVI1 1328 aa16.52■□□□□ 0.24
CDH11-204ENST00000562712 HOXB7P09629 217 aa16.52■□□□□ 0.24
CDH11-204ENST00000562712 CYP19A1P11511 503 aaPredicted RBP16.52■□□□□ 0.24
CDH11-204ENST00000562712 CDCA7LQ96GN5 454 aa16.52■□□□□ 0.24
CDH11-204ENST00000562712 SPON1Q9HCB6 807 aa16.52■□□□□ 0.24
CDH11-204ENST00000562712 USP16Q9Y5T5 823 aa16.52■□□□□ 0.24
CDH11-204ENST00000562712 SOS1Q07889 1333 aaPredicted RBP16.51■□□□□ 0.23
CDH11-204ENST00000562712 PRAMEF22A3QJZ6 481 aa16.5■□□□□ 0.23
CDH11-204ENST00000562712 KRT24Q2M2I5 525 aa16.5■□□□□ 0.23
CDH11-204ENST00000562712 DUSP27Q5VZP5 1158 aa16.5■□□□□ 0.23
CDH11-204ENST00000562712 C8orf58Q8NAV2 365 aa16.5■□□□□ 0.23
CDH11-204ENST00000562712 AKT1S1Q96B36 256 aa16.5■□□□□ 0.23
CDH11-204ENST00000562712 CHMP4AQ9BY43 222 aa16.5■□□□□ 0.23
CDH11-204ENST00000562712 TJP1Q07157 1748 aa16.5■□□□□ 0.23
CDH11-204ENST00000562712 CNTNAP4Q9C0A0 1308 aa16.49■□□□□ 0.23
CDH11-204ENST00000562712 CRKLP46109 303 aaKnown RBP16.49■□□□□ 0.23
CDH11-204ENST00000562712 INTS5Q6P9B9 1019 aaKnown RBP16.49■□□□□ 0.23
CDH11-204ENST00000562712 COL5A3P25940 1745 aaPredicted RBP16.48■□□□□ 0.23
CDH11-204ENST00000562712 ZBTB7AO95365 584 aa16.48■□□□□ 0.23
CDH11-204ENST00000562712 EXOSC9Q06265 439 aaKnown RBP16.48■□□□□ 0.23
CDH11-204ENST00000562712 CCDC87Q9NVE4 849 aa16.48■□□□□ 0.23
CDH11-204ENST00000562712 C4BP0C0L5 1744 aa16.48■□□□□ 0.23
CDH11-204ENST00000562712 ELL2O00472 640 aaPredicted RBP16.47■□□□□ 0.23
CDH11-204ENST00000562712 PTGER2P43116 358 aa16.47■□□□□ 0.23
CDH11-204ENST00000562712 TWISTNBQ3B726 338 aaPredicted RBP16.47■□□□□ 0.23
CDH11-204ENST00000562712 TSPYL6Q8N831 410 aa16.47■□□□□ 0.23
CDH11-204ENST00000562712 AK7Q96M32 723 aa16.47■□□□□ 0.23
CDH11-204ENST00000562712 TFCP2L1Q9NZI6 479 aa16.47■□□□□ 0.23
CDH11-204ENST00000562712 UBR3Q6ZT12 1888 aa16.46■□□□□ 0.23
CDH11-204ENST00000562712 RPS6KA4O75676 772 aa16.46■□□□□ 0.23
CDH11-204ENST00000562712 A1BGP04217 495 aa16.46■□□□□ 0.23
CDH11-204ENST00000562712 EIF2S2P20042 333 aaKnown RBP16.46■□□□□ 0.23
CDH11-204ENST00000562712 PNPLA7Q6ZV29 1317 aa16.45■□□□□ 0.22
CDH11-204ENST00000562712 GNPATO15228 680 aa16.45■□□□□ 0.22
CDH11-204ENST00000562712 VAMP4O75379 141 aa16.45■□□□□ 0.22
CDH11-204ENST00000562712 YTHDC1Q96MU7 727 aaKnown RBP16.45■□□□□ 0.22
CDH11-204ENST00000562712 SGIP1Q9BQI5 828 aa16.45■□□□□ 0.22
CDH11-204ENST00000562712 MTFR1LQ9H019 292 aa16.45■□□□□ 0.22
CDH11-204ENST00000562712 RTCBQ9Y3I0 505 aaKnown RBP16.45■□□□□ 0.22
CDH11-204ENST00000562712 ERBB4Q15303 1308 aa16.45■□□□□ 0.22
CDH11-204ENST00000562712 SSFA2P28290 1259 aa16.44■□□□□ 0.22
CDH11-204ENST00000562712 IL6STP40189 918 aaPredicted RBP16.44■□□□□ 0.22
CDH11-204ENST00000562712 HDGFL1Q5TGJ6 251 aa16.44■□□□□ 0.22
CDH11-204ENST00000562712 FLAD1Q8NFF5 587 aa16.44■□□□□ 0.22
CDH11-204ENST00000562712 ZBTB1Q9Y2K1 713 aa16.44■□□□□ 0.22
CDH11-204ENST00000562712 NBPF26B4DH59 902 aa16.43■□□□□ 0.22
CDH11-204ENST00000562712 CT47B1P0C2W7 299 aaPredicted RBP16.43■□□□□ 0.22
CDH11-204ENST00000562712 ADRA2BP18089 450 aa16.43■□□□□ 0.22
CDH11-204ENST00000562712 CANXP27824 592 aaKnown RBP16.43■□□□□ 0.22
CDH11-204ENST00000562712 EIF5P55010 431 aaKnown RBP16.43■□□□□ 0.22
CDH11-204ENST00000562712 TRAPPC3LQ5T215 181 aa16.43■□□□□ 0.22
CDH11-204ENST00000562712 CCDC30Q5VVM6 783 aa16.43■□□□□ 0.22
CDH11-204ENST00000562712 NBPF10Q6P3W6 841 aaKnown RBP16.43■□□□□ 0.22
CDH11-204ENST00000562712 NBPF15Q8N660 670 aa16.43■□□□□ 0.22
CDH11-204ENST00000562712 PPP1R1BQ9UD71 204 aaPredicted RBP16.43■□□□□ 0.22
CDH11-204ENST00000562712 ATF5Q9Y2D1 282 aaPredicted RBP16.43■□□□□ 0.22
CDH11-204ENST00000562712 MYH14Q7Z406 1995 aaKnown RBP16.43■□□□□ 0.22
CDH11-204ENST00000562712 LAMB4A4D0S4 1761 aa16.43■□□□□ 0.22
CDH11-204ENST00000562712 PDIA6Q15084 440 aa16.42■□□□□ 0.22
CDH11-204ENST00000562712 ZNF428Q96B54 188 aa16.42■□□□□ 0.22
CDH11-204ENST00000562712 DDX21Q9NR30 783 aaKnown RBP eCLIP16.42■□□□□ 0.22
CDH11-204ENST00000562712 DBF4Q9UBU7 674 aaPredicted RBP16.42■□□□□ 0.22
CDH11-204ENST00000562712 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.41■□□□□ 0.22
CDH11-204ENST00000562712 AMIGO3Q86WK7 504 aa16.41■□□□□ 0.22
CDH11-204ENST00000562712 NECTIN2Q92692 538 aa16.41■□□□□ 0.22
CDH11-204ENST00000562712 A0A087WZG4 1122 aa16.4■□□□□ 0.22
CDH11-204ENST00000562712 NPM2Q86SE8 214 aaKnown RBP16.4■□□□□ 0.22
CDH11-204ENST00000562712 ARHGEF1Q92888 912 aaKnown RBP16.4■□□□□ 0.22
CDH11-204ENST00000562712 CHPF2Q9P2E5 772 aa16.4■□□□□ 0.22
CDH11-204ENST00000562712 MYL6BP14649 208 aa16.39■□□□□ 0.21
CDH11-204ENST00000562712 PIP4K2AP48426 406 aaPredicted RBP16.39■□□□□ 0.21
CDH11-204ENST00000562712 LRP10Q7Z4F1 713 aa16.39■□□□□ 0.21
CDH11-204ENST00000562712 COL23A1Q86Y22 540 aaPredicted RBP16.39■□□□□ 0.21
CDH11-204ENST00000562712 STK31Q9BXU1 1019 aa16.39■□□□□ 0.21
CDH11-204ENST00000562712 HYPKQ9NX55 129 aa16.39■□□□□ 0.21
CDH11-204ENST00000562712 PHF14O94880 888 aa16.38■□□□□ 0.21
CDH11-204ENST00000562712 RFC4P35249 363 aa16.38■□□□□ 0.21
CDH11-204ENST00000562712 SMIM5Q71RC9 77 aa16.38■□□□□ 0.21
CDH11-204ENST00000562712 SLC16A10Q8TF71 515 aa16.38■□□□□ 0.21
CDH11-204ENST00000562712 COL15A1P39059 1388 aa16.38■□□□□ 0.21
CDH11-204ENST00000562712 SLC4A2P04920 1241 aa16.37■□□□□ 0.21
CDH11-204ENST00000562712 PROSER3Q2NL68 480 aa16.37■□□□□ 0.21
CDH11-204ENST00000562712 ALDH1L2Q3SY69 923 aa16.36■□□□□ 0.21
CDH11-204ENST00000562712 NARFQ9UHQ1 456 aa16.36■□□□□ 0.21
CDH11-204ENST00000562712 ZNF330Q9Y3S2 320 aaPredicted RBP16.36■□□□□ 0.21
CDH11-204ENST00000562712 MSH5O43196 834 aa16.35■□□□□ 0.21
CDH11-204ENST00000562712 ZPR1O75312 459 aa16.35■□□□□ 0.21
CDH11-204ENST00000562712 ANXA1P04083 346 aa16.35■□□□□ 0.21
CDH11-204ENST00000562712 COPS6Q7L5N1 327 aa16.35■□□□□ 0.21
CDH11-204ENST00000562712 FHDC1Q9C0D6 1143 aaPredicted RBP16.35■□□□□ 0.21
CDH11-204ENST00000562712 ERVV-1B6SEH8 477 aa16.34■□□□□ 0.21
CDH11-204ENST00000562712 TCERG1O14776 1098 aaKnown RBP16.34■□□□□ 0.21
CDH11-204ENST00000562712 RGL2O15211 777 aa16.34■□□□□ 0.21
CDH11-204ENST00000562712 DZIP3Q86Y13 1208 aaKnown RBP16.34■□□□□ 0.21
CDH11-204ENST00000562712 ARXQ96QS3 562 aa16.34■□□□□ 0.21
CDH11-204ENST00000562712 TBC1D2BQ9UPU7 963 aa16.34■□□□□ 0.21
CDH11-204ENST00000562712 C4AP0C0L4 1744 aa16.33■□□□□ 0.21
CDH11-204ENST00000562712 CLEC4GQ6UXB4 293 aa16.33■□□□□ 0.2
CDH11-204ENST00000562712 KIF6Q6ZMV9 814 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms