RNA–Protein interactions for RNA: ENST00000562373.1

NR4A1-219, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 3

Gene NR4A1, Length 838 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-219ENST00000562373 NLGN1Q8N2Q7 840 aa27.9■■■□□ 2.06
NR4A1-219ENST00000562373 C4AP0C0L4 1744 aa27.89■■■□□ 2.06
NR4A1-219ENST00000562373 PRAMEF22A3QJZ6 481 aa27.89■■■□□ 2.06
NR4A1-219ENST00000562373 GPR162Q16538 588 aa27.89■■■□□ 2.06
NR4A1-219ENST00000562373 STARD3NLO95772 234 aa27.88■■■□□ 2.05
NR4A1-219ENST00000562373 FKBP8Q14318 412 aa27.88■■■□□ 2.05
NR4A1-219ENST00000562373 TAF7Q15545 349 aaPredicted RBP27.88■■■□□ 2.05
NR4A1-219ENST00000562373 CD2APQ9Y5K6 639 aa27.88■■■□□ 2.05
NR4A1-219ENST00000562373 A1BGP04217 495 aa27.87■■■□□ 2.05
NR4A1-219ENST00000562373 USPL1Q5W0Q7 1092 aa27.87■■■□□ 2.05
NR4A1-219ENST00000562373 USP42Q9H9J4 1324 aaKnown RBP27.87■■■□□ 2.05
NR4A1-219ENST00000562373 WWC3Q9ULE0 1092 aa27.86■■■□□ 2.05
NR4A1-219ENST00000562373 ADAMTS8Q9UP79 889 aa27.86■■■□□ 2.05
NR4A1-219ENST00000562373 RRP7AQ9Y3A4 280 aaKnown RBP27.86■■■□□ 2.05
NR4A1-219ENST00000562373 USP16Q9Y5T5 823 aa27.86■■■□□ 2.05
NR4A1-219ENST00000562373 RIPK4P57078 832 aa27.85■■■□□ 2.05
NR4A1-219ENST00000562373 WDR43Q15061 677 aaKnown RBP eCLIP27.85■■■□□ 2.05
NR4A1-219ENST00000562373 TEX13AQ9BXU3 409 aaPredicted RBP27.85■■■□□ 2.05
NR4A1-219ENST00000562373 ZPR1O75312 459 aa27.84■■■□□ 2.05
NR4A1-219ENST00000562373 PIP4K2AP48426 406 aaPredicted RBP27.84■■■□□ 2.05
NR4A1-219ENST00000562373 ZNF330Q9Y3S2 320 aaPredicted RBP27.84■■■□□ 2.05
NR4A1-219ENST00000562373 COL15A1P39059 1388 aa27.84■■■□□ 2.05
NR4A1-219ENST00000562373 NEUROD2Q15784 382 aa27.83■■■□□ 2.05
NR4A1-219ENST00000562373 PARP3Q9Y6F1 533 aa27.83■■■□□ 2.05
NR4A1-219ENST00000562373 YY1P25490 414 aa27.82■■■□□ 2.04
NR4A1-219ENST00000562373 TMPOP42166 694 aaKnown RBP27.82■■■□□ 2.04
NR4A1-219ENST00000562373 EIF5P55010 431 aaKnown RBP27.82■■■□□ 2.04
NR4A1-219ENST00000562373 YBX3P16989 372 aaKnown RBP eCLIP27.81■■■□□ 2.04
NR4A1-219ENST00000562373 CCDC184Q52MB2 194 aa27.81■■■□□ 2.04
NR4A1-219ENST00000562373 NARFQ9UHQ1 456 aa27.81■■■□□ 2.04
NR4A1-219ENST00000562373 SNRPA1P09661 255 aaKnown RBP27.8■■■□□ 2.04
NR4A1-219ENST00000562373 DDR1Q08345 913 aa27.8■■■□□ 2.04
NR4A1-219ENST00000562373 BCL2L12Q9HB09 334 aa27.8■■■□□ 2.04
NR4A1-219ENST00000562373 TBC1D2BQ9UPU7 963 aa27.79■■■□□ 2.04
NR4A1-219ENST00000562373 TM4SF1P30408 202 aa27.78■■■□□ 2.04
NR4A1-219ENST00000562373 RUNDC1Q96C34 613 aa27.78■■■□□ 2.04
NR4A1-219ENST00000562373 NFIXQ14938 502 aa27.75■■■□□ 2.03
NR4A1-219ENST00000562373 PNISRQ8TF01 805 aaKnown RBP27.75■■■□□ 2.03
NR4A1-219ENST00000562373 A0A0G2JLW4 131 aa27.74■■■□□ 2.03
NR4A1-219ENST00000562373 POLRMTO00411 1230 aaKnown RBP27.74■■■□□ 2.03
NR4A1-219ENST00000562373 IL6STP40189 918 aaPredicted RBP27.74■■■□□ 2.03
NR4A1-219ENST00000562373 EIF4A1P60842 406 aaKnown RBP27.74■■■□□ 2.03
NR4A1-219ENST00000562373 BICDL1Q6ZP65 573 aa27.74■■■□□ 2.03
NR4A1-219ENST00000562373 A0A087WZG4 1122 aa27.73■■■□□ 2.03
NR4A1-219ENST00000562373 NBPF26B4DH59 902 aa27.71■■■□□ 2.03
NR4A1-219ENST00000562373 NBPF10Q6P3W6 841 aaKnown RBP27.71■■■□□ 2.03
NR4A1-219ENST00000562373 NBPF15Q8N660 670 aa27.71■■■□□ 2.03
NR4A1-219ENST00000562373 TSPYL4Q9UJ04 414 aa27.71■■■□□ 2.03
NR4A1-219ENST00000562373 TRIM35Q9UPQ4 493 aa27.71■■■□□ 2.03
NR4A1-219ENST00000562373 KDM3BQ7LBC6 1761 aa27.71■■■□□ 2.03
NR4A1-219ENST00000562373 C10orf71Q711Q0 1435 aa27.7■■■□□ 2.03
NR4A1-219ENST00000562373 DPEP1P16444 411 aa27.7■■■□□ 2.02
NR4A1-219ENST00000562373 N4BP2Q86UW6 1770 aaPredicted RBP27.7■■■□□ 2.02
NR4A1-219ENST00000562373 UTRNP46939 3433 aa27.7■■■□□ 2.02
NR4A1-219ENST00000562373 GIGYF1O75420 1035 aaPredicted RBP27.69■■■□□ 2.02
NR4A1-219ENST00000562373 TBC1D9BQ66K14 1250 aa27.69■■■□□ 2.02
NR4A1-219ENST00000562373 NPM2Q86SE8 214 aaKnown RBP27.69■■■□□ 2.02
NR4A1-219ENST00000562373 PXDNLA1KZ92 1463 aa27.69■■■□□ 2.02
NR4A1-219ENST00000562373 TGFB2P61812 414 aa27.68■■■□□ 2.02
NR4A1-219ENST00000562373 LMOD3Q0VAK6 560 aa27.68■■■□□ 2.02
NR4A1-219ENST00000562373 DZIP3Q86Y13 1208 aaKnown RBP27.68■■■□□ 2.02
NR4A1-219ENST00000562373 KIF13BQ9NQT8 1826 aa27.67■■■□□ 2.02
NR4A1-219ENST00000562373 SENP3-EIF4A1A0A087X0R7 540 aa27.67■■■□□ 2.02
NR4A1-219ENST00000562373 GRIN3BO60391 1043 aa27.67■■■□□ 2.02
NR4A1-219ENST00000562373 CAMTA2O94983 1202 aa27.67■■■□□ 2.02
NR4A1-219ENST00000562373 SERPINB2P05120 415 aa27.67■■■□□ 2.02
NR4A1-219ENST00000562373 LAS1LQ9Y4W2 734 aaKnown RBP27.67■■■□□ 2.02
NR4A1-219ENST00000562373 APAF1O14727 1248 aa27.66■■■□□ 2.02
NR4A1-219ENST00000562373 ANP32CO43423 234 aa27.66■■■□□ 2.02
NR4A1-219ENST00000562373 NGEFQ8N5V2 710 aa27.66■■■□□ 2.02
NR4A1-219ENST00000562373 KIAA1551Q9HCM1 1747 aa27.65■■■□□ 2.02
NR4A1-219ENST00000562373 KCNA3P22001 575 aa27.64■■■□□ 2.02
NR4A1-219ENST00000562373 CHRNA5P30532 468 aa27.64■■■□□ 2.02
NR4A1-219ENST00000562373 CHD4Q14839 1912 aa27.64■■■□□ 2.02
NR4A1-219ENST00000562373 GOLGB1Q14789 3259 aaKnown RBP27.64■■■□□ 2.01
NR4A1-219ENST00000562373 AFDNP55196 1824 aaKnown RBP27.63■■■□□ 2.01
NR4A1-219ENST00000562373 CCDC24Q8N4L8 307 aa27.63■■■□□ 2.01
NR4A1-219ENST00000562373 BCS1LQ9Y276 419 aa27.63■■■□□ 2.01
NR4A1-219ENST00000562373 MYL6BP14649 208 aa27.6■■■□□ 2.01
NR4A1-219ENST00000562373 EIF2S2P20042 333 aaKnown RBP27.6■■■□□ 2.01
NR4A1-219ENST00000562373 KRT24Q2M2I5 525 aa27.6■■■□□ 2.01
NR4A1-219ENST00000562373 CHL1O00533 1208 aa27.59■■■□□ 2.01
NR4A1-219ENST00000562373 MRS2Q9HD23 443 aa27.59■■■□□ 2.01
NR4A1-219ENST00000562373 SCN7AQ01118 1682 aa27.59■■■□□ 2.01
NR4A1-219ENST00000562373 NECTIN2Q92692 538 aa27.58■■■□□ 2.01
NR4A1-219ENST00000562373 BABAM1Q9NWV8 329 aa27.58■■■□□ 2.01
NR4A1-219ENST00000562373 CARMIL3Q8ND23 1372 aa27.58■■■□□ 2.01
NR4A1-219ENST00000562373 LAMB4A4D0S4 1761 aa27.58■■■□□ 2
NR4A1-219ENST00000562373 HLFQ16534 295 aa27.57■■■□□ 2
NR4A1-219ENST00000562373 SETDB2Q96T68 719 aa27.57■■■□□ 2
NR4A1-219ENST00000562373 TTLL7Q6ZT98 887 aa27.56■■■□□ 2
NR4A1-219ENST00000562373 ZNF784Q8NCA9 323 aaPredicted RBP27.56■■■□□ 2
NR4A1-219ENST00000562373 PIM2Q9P1W9 311 aa27.56■■■□□ 2
NR4A1-219ENST00000562373 NRXN2Q9P2S2 1712 aa27.55■■■□□ 2
NR4A1-219ENST00000562373 ANXA1P04083 346 aa27.55■■■□□ 2
NR4A1-219ENST00000562373 PRR5LQ6MZQ0 368 aa27.54■■■□□ 2
NR4A1-219ENST00000562373 BCORQ6W2J9 1755 aa27.54■■■□□ 2
NR4A1-219ENST00000562373 FAM177BA6PVY3 158 aa27.53■■■□□ 2
NR4A1-219ENST00000562373 PROSER3Q2NL68 480 aa27.52■■■□□ 2
NR4A1-219ENST00000562373 CLEC4GQ6UXB4 293 aa27.52■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms