RNA–Protein interactions for RNA: ENST00000562299.1

LPCAT2-202, Transcript of lysophosphatidylcholine acyltransferase 2, humanhuman

TSL 2

Gene LPCAT2, Length 551 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT2-202ENST00000562299 GPAMQ9HCL2 828 aa7.65□□□□□ -1.18
LPCAT2-202ENST00000562299 CHMP3Q9Y3E7 222 aa7.65□□□□□ -1.18
LPCAT2-202ENST00000562299 FOXR1Q6PIV2 292 aa7.64□□□□□ -1.19
LPCAT2-202ENST00000562299 SLC9A9Q8IVB4 645 aa7.64□□□□□ -1.19
LPCAT2-202ENST00000562299 ZNF232Q9UNY5 417 aa7.64□□□□□ -1.19
LPCAT2-202ENST00000562299 ACIN1Q9UKV3 1341 aaKnown RBP7.63□□□□□ -1.19
LPCAT2-202ENST00000562299 SUZ12Q15022 739 aaKnown RBP7.63□□□□□ -1.19
LPCAT2-202ENST00000562299 NBPF1Q3BBV0 1214 aa7.63□□□□□ -1.19
LPCAT2-202ENST00000562299 TBCELQ5QJ74 424 aa7.63□□□□□ -1.19
LPCAT2-202ENST00000562299 PBXIP1Q96AQ6 731 aa7.63□□□□□ -1.19
LPCAT2-202ENST00000562299 GMCL1Q96IK5 515 aa7.63□□□□□ -1.19
LPCAT2-202ENST00000562299 C1orf115Q9H7X2 142 aa7.63□□□□□ -1.19
LPCAT2-202ENST00000562299 NOVA2Q9UNW9 492 aaKnown RBP7.63□□□□□ -1.19
LPCAT2-202ENST00000562299 IQSEC3Q9UPP2 1182 aaPredicted RBP7.63□□□□□ -1.19
LPCAT2-202ENST00000562299 PARP3Q9Y6F1 533 aa7.63□□□□□ -1.19
LPCAT2-202ENST00000562299 DKK1O94907 266 aa7.62□□□□□ -1.19
LPCAT2-202ENST00000562299 MSX1P28360 303 aa7.62□□□□□ -1.19
LPCAT2-202ENST00000562299 TRIM22Q8IYM9 498 aa7.62□□□□□ -1.19
LPCAT2-202ENST00000562299 NANOS1Q8WY41 292 aaKnown RBP7.62□□□□□ -1.19
LPCAT2-202ENST00000562299 ARID3AQ99856 593 aa7.62□□□□□ -1.19
LPCAT2-202ENST00000562299 TSPAN10Q9H1Z9 355 aaPredicted RBP7.62□□□□□ -1.19
LPCAT2-202ENST00000562299 USP3Q9Y6I4 520 aa7.62□□□□□ -1.19
LPCAT2-202ENST00000562299 SERTM1A2A2V5 107 aa7.61□□□□□ -1.19
LPCAT2-202ENST00000562299 TATP17735 454 aaPredicted RBP7.61□□□□□ -1.19
LPCAT2-202ENST00000562299 NOS2P35228 1153 aa7.61□□□□□ -1.19
LPCAT2-202ENST00000562299 EPHA4P54764 986 aa7.61□□□□□ -1.19
LPCAT2-202ENST00000562299 FOXK2Q01167 660 aa7.61□□□□□ -1.19
LPCAT2-202ENST00000562299 DBN1Q16643 649 aa7.61□□□□□ -1.19
LPCAT2-202ENST00000562299 ARSJQ5FYB0 599 aaPredicted RBP7.61□□□□□ -1.19
LPCAT2-202ENST00000562299 KCTD17Q8N5Z5 321 aa7.61□□□□□ -1.19
LPCAT2-202ENST00000562299 CHMP7Q8WUX9 453 aaPredicted RBP7.61□□□□□ -1.19
LPCAT2-202ENST00000562299 L3MBTL2Q969R5 705 aa7.61□□□□□ -1.19
LPCAT2-202ENST00000562299 CUEDC1Q9NWM3 386 aaPredicted RBP7.61□□□□□ -1.19
LPCAT2-202ENST00000562299 ATAD2Q6PL18 1390 aa7.6□□□□□ -1.19
LPCAT2-202ENST00000562299 PPP1R12BO60237 982 aaPredicted RBP7.6□□□□□ -1.19
LPCAT2-202ENST00000562299 LGR5O75473 907 aa7.6□□□□□ -1.19
LPCAT2-202ENST00000562299 PSMA6P60900 246 aaKnown RBP7.6□□□□□ -1.19
LPCAT2-202ENST00000562299 SRPK2P78362 688 aaKnown RBP7.6□□□□□ -1.19
LPCAT2-202ENST00000562299 TEAD4Q15561 434 aa7.6□□□□□ -1.19
LPCAT2-202ENST00000562299 EFHC2Q5JST6 749 aa7.6□□□□□ -1.19
LPCAT2-202ENST00000562299 BICDL1Q6ZP65 573 aa7.6□□□□□ -1.19
LPCAT2-202ENST00000562299 C1orf216Q8TAB5 229 aa7.6□□□□□ -1.19
LPCAT2-202ENST00000562299 SCG3Q8WXD2 468 aaKnown RBP7.6□□□□□ -1.19
LPCAT2-202ENST00000562299 NUCKS1Q9H1E3 243 aaKnown RBP7.6□□□□□ -1.19
LPCAT2-202ENST00000562299 RUBCNLQ9H714 662 aa7.6□□□□□ -1.19
LPCAT2-202ENST00000562299 ATG7O95352 703 aa7.59□□□□□ -1.19
LPCAT2-202ENST00000562299 VSIG8P0DPA2 414 aa7.59□□□□□ -1.19
LPCAT2-202ENST00000562299 GAS2L2Q8NHY3 880 aa7.59□□□□□ -1.19
LPCAT2-202ENST00000562299 TRERF1Q96PN7 1200 aa7.59□□□□□ -1.19
LPCAT2-202ENST00000562299 ARXQ96QS3 562 aa7.59□□□□□ -1.19
LPCAT2-202ENST00000562299 NEUROD4Q9HD90 331 aa7.59□□□□□ -1.19
LPCAT2-202ENST00000562299 GJA3Q9Y6H8 435 aa7.59□□□□□ -1.19
LPCAT2-202ENST00000562299 PPP1R15AO75807 674 aaPredicted RBP7.58□□□□□ -1.2
LPCAT2-202ENST00000562299 ELOAQ14241 798 aaKnown RBP7.58□□□□□ -1.2
LPCAT2-202ENST00000562299 GPR161Q8N6U8 529 aaKnown RBP7.58□□□□□ -1.2
LPCAT2-202ENST00000562299 GTPBP3Q969Y2 492 aaKnown RBP7.58□□□□□ -1.2
LPCAT2-202ENST00000562299 ZNF837Q96EG3 531 aaPredicted RBP7.58□□□□□ -1.2
LPCAT2-202ENST00000562299 ZDHHC3Q9NYG2 299 aa7.58□□□□□ -1.2
LPCAT2-202ENST00000562299 HCN4Q9Y3Q4 1203 aa7.58□□□□□ -1.2
LPCAT2-202ENST00000562299 CCDC180Q9P1Z9 1646 aa7.57□□□□□ -1.2
LPCAT2-202ENST00000562299 ZDHHC1Q8WTX9 485 aa7.57□□□□□ -1.2
LPCAT2-202ENST00000562299 VTI1AQ96AJ9 217 aa7.57□□□□□ -1.2
LPCAT2-202ENST00000562299 GPR25O00155 361 aa7.56□□□□□ -1.2
LPCAT2-202ENST00000562299 TXLNAP40222 546 aa7.56□□□□□ -1.2
LPCAT2-202ENST00000562299 KCNMA1Q12791 1236 aa7.56□□□□□ -1.2
LPCAT2-202ENST00000562299 LBRQ14739 615 aaKnown RBP7.56□□□□□ -1.2
LPCAT2-202ENST00000562299 ZNF295-AS1Q8N0V1 137 aa7.56□□□□□ -1.2
LPCAT2-202ENST00000562299 COL25A1Q9BXS0 654 aaPredicted RBP7.56□□□□□ -1.2
LPCAT2-202ENST00000562299 A0A1W2PNR3 127 aa7.55□□□□□ -1.2
LPCAT2-202ENST00000562299 C21orf2O43822 256 aa7.55□□□□□ -1.2
LPCAT2-202ENST00000562299 SWI5Q1ZZU3 235 aa7.55□□□□□ -1.2
LPCAT2-202ENST00000562299 FIGNL1Q6PIW4 674 aa7.55□□□□□ -1.2
LPCAT2-202ENST00000562299 CNTNAP3BQ96NU0 1288 aa7.55□□□□□ -1.2
LPCAT2-202ENST00000562299 CNTNAP3Q9BZ76 1288 aa7.55□□□□□ -1.2
LPCAT2-202ENST00000562299 CRISPLD1Q9H336 500 aa7.55□□□□□ -1.2
LPCAT2-202ENST00000562299 ZMIZ1Q9ULJ6 1067 aa7.55□□□□□ -1.2
LPCAT2-202ENST00000562299 PHF24Q9UPV7 400 aa7.55□□□□□ -1.2
LPCAT2-202ENST00000562299 EML1O00423 815 aa7.54□□□□□ -1.2
LPCAT2-202ENST00000562299 ATP4AP20648 1035 aa7.54□□□□□ -1.2
LPCAT2-202ENST00000562299 IGFBP4P22692 258 aa7.54□□□□□ -1.2
LPCAT2-202ENST00000562299 SH3PXD2AQ5TCZ1 1133 aa7.54□□□□□ -1.2
LPCAT2-202ENST00000562299 NLRP8Q86W28 1048 aa7.54□□□□□ -1.2
LPCAT2-202ENST00000562299 STAG2Q8N3U4 1231 aa7.54□□□□□ -1.2
LPCAT2-202ENST00000562299 TMEM151AQ8N4L1 468 aa7.54□□□□□ -1.2
LPCAT2-202ENST00000562299 STK32AQ8WU08 396 aa7.54□□□□□ -1.2
LPCAT2-202ENST00000562299 NGLY1Q96IV0 654 aa7.54□□□□□ -1.2
LPCAT2-202ENST00000562299 ZIC5Q96T25 663 aa7.54□□□□□ -1.2
LPCAT2-202ENST00000562299 C2orf49Q9BVC5 232 aaPredicted RBP7.54□□□□□ -1.2
LPCAT2-202ENST00000562299 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.54□□□□□ -1.2
LPCAT2-202ENST00000562299 TMEM164Q5U3C3 297 aa7.53□□□□□ -1.2
LPCAT2-202ENST00000562299 C1orf53Q5VUE5 145 aa7.53□□□□□ -1.2
LPCAT2-202ENST00000562299 RHPN1Q8TCX5 695 aa7.53□□□□□ -1.2
LPCAT2-202ENST00000562299 PRIMPOLQ96LW4 560 aa7.53□□□□□ -1.2
LPCAT2-202ENST00000562299 PHACTR1Q9C0D0 580 aa7.53□□□□□ -1.2
LPCAT2-202ENST00000562299 PRMT3O60678 531 aa7.52□□□□□ -1.21
LPCAT2-202ENST00000562299 GDF11O95390 407 aa7.52□□□□□ -1.21
LPCAT2-202ENST00000562299 WEE1P30291 646 aa7.52□□□□□ -1.21
LPCAT2-202ENST00000562299 HIRAP54198 1017 aaPredicted RBP7.52□□□□□ -1.21
LPCAT2-202ENST00000562299 ALDH16A1Q8IZ83 802 aa7.52□□□□□ -1.21
LPCAT2-202ENST00000562299 CFHR5Q9BXR6 569 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms