RNA–Protein interactions for RNA: ENST00000562173.1

UBR1-203, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-203ENST00000562173 ZNF784Q8NCA9 323 aaPredicted RBP9.19□□□□□ -0.94
UBR1-203ENST00000562173 SENP2Q9HC62 589 aa9.19□□□□□ -0.94
UBR1-203ENST00000562173 TFIP11Q9UBB9 837 aaKnown RBP9.19□□□□□ -0.94
UBR1-203ENST00000562173 UHRF1BP1Q6BDS2 1440 aa9.19□□□□□ -0.94
UBR1-203ENST00000562173 ALKQ9UM73 1620 aa9.19□□□□□ -0.94
UBR1-203ENST00000562173 WDR4P57081 412 aaKnown RBP9.18□□□□□ -0.94
UBR1-203ENST00000562173 CLTCQ00610 1675 aaKnown RBP9.18□□□□□ -0.94
UBR1-203ENST00000562173 USP4Q13107 963 aa9.18□□□□□ -0.94
UBR1-203ENST00000562173 NCOA4Q13772 614 aa9.18□□□□□ -0.94
UBR1-203ENST00000562173 TRIM50Q86XT4 487 aa9.18□□□□□ -0.94
UBR1-203ENST00000562173 ITSN2Q9NZM3 1697 aa9.18□□□□□ -0.94
UBR1-203ENST00000562173 KDM5CP41229 1560 aa9.17□□□□□ -0.94
UBR1-203ENST00000562173 NCOA1Q15788 1441 aa9.17□□□□□ -0.94
UBR1-203ENST00000562173 TRAPPC8Q9Y2L5 1435 aa9.17□□□□□ -0.94
UBR1-203ENST00000562173 ATP5J2-PTCD1G3V325 749 aa9.17□□□□□ -0.94
UBR1-203ENST00000562173 ZIC2O95409 532 aaPredicted RBP9.17□□□□□ -0.94
UBR1-203ENST00000562173 OXLD1Q5BKU9 147 aa9.17□□□□□ -0.94
UBR1-203ENST00000562173 CYP2U1Q7Z449 544 aa9.17□□□□□ -0.94
UBR1-203ENST00000562173 NOD1Q9Y239 953 aa9.17□□□□□ -0.94
UBR1-203ENST00000562173 PLCH2O75038 1416 aa9.16□□□□□ -0.94
UBR1-203ENST00000562173 LILRA1O75019 489 aa9.16□□□□□ -0.94
UBR1-203ENST00000562173 PPP1R15AO75807 674 aaPredicted RBP9.16□□□□□ -0.94
UBR1-203ENST00000562173 TREML4Q6UXN2 200 aa9.16□□□□□ -0.94
UBR1-203ENST00000562173 Q6ZVU0 165 aa9.16□□□□□ -0.94
UBR1-203ENST00000562173 MEIOBQ8N635 442 aa9.16□□□□□ -0.94
UBR1-203ENST00000562173 KIFC2Q96AC6 838 aa9.16□□□□□ -0.94
UBR1-203ENST00000562173 PBXIP1Q96AQ6 731 aa9.16□□□□□ -0.94
UBR1-203ENST00000562173 ITPKCQ96DU7 683 aa9.16□□□□□ -0.94
UBR1-203ENST00000562173 ESF1Q9H501 851 aaKnown RBP9.16□□□□□ -0.94
UBR1-203ENST00000562173 STRCP1A6NGW2 1772 aa9.16□□□□□ -0.94
UBR1-203ENST00000562173 MYO3AQ8NEV4 1616 aa9.16□□□□□ -0.94
UBR1-203ENST00000562173 PTPRTO14522 1441 aa9.15□□□□□ -0.94
UBR1-203ENST00000562173 CDC42BPAQ5VT25 1732 aa9.15□□□□□ -0.94
UBR1-203ENST00000562173 PLEKHD1A6NEE1 506 aa9.15□□□□□ -0.94
UBR1-203ENST00000562173 UBAP1LF5GYI3 381 aa9.15□□□□□ -0.94
UBR1-203ENST00000562173 ADH1AP07327 375 aa9.15□□□□□ -0.94
UBR1-203ENST00000562173 LMOD1P29536 600 aaPredicted RBP9.15□□□□□ -0.94
UBR1-203ENST00000562173 HSPA1LP34931 641 aa9.15□□□□□ -0.94
UBR1-203ENST00000562173 ATP1A2P50993 1020 aa9.15□□□□□ -0.94
UBR1-203ENST00000562173 CYLDQ9NQC7 956 aa9.15□□□□□ -0.94
UBR1-203ENST00000562173 TMPRSS4Q9NRS4 437 aa9.15□□□□□ -0.94
UBR1-203ENST00000562173 SETD1AO15047 1707 aaKnown RBP9.14□□□□□ -0.95
UBR1-203ENST00000562173 SCTRP47872 440 aa9.14□□□□□ -0.95
UBR1-203ENST00000562173 NFX1Q12986 1120 aaKnown RBP9.14□□□□□ -0.95
UBR1-203ENST00000562173 CDCA7Q9BWT1 371 aaPredicted RBP9.14□□□□□ -0.95
UBR1-203ENST00000562173 ARHGAP5Q13017 1502 aa9.14□□□□□ -0.95
UBR1-203ENST00000562173 MAGI2Q86UL8 1455 aa9.14□□□□□ -0.95
UBR1-203ENST00000562173 FAM196BA6NMK8 535 aa9.13□□□□□ -0.95
UBR1-203ENST00000562173 ZFAND3Q9H8U3 227 aa9.13□□□□□ -0.95
UBR1-203ENST00000562173 PIP4K2BP78356 416 aa9.12□□□□□ -0.95
UBR1-203ENST00000562173 LCE2CQ5TA81 110 aa9.12□□□□□ -0.95
UBR1-203ENST00000562173 DEPDC4Q8N2C3 294 aa9.12□□□□□ -0.95
UBR1-203ENST00000562173 OSBPL3Q9H4L5 887 aa9.12□□□□□ -0.95
UBR1-203ENST00000562173 ZNF142P52746 1687 aaPredicted RBP9.12□□□□□ -0.95
UBR1-203ENST00000562173 ABCC1P33527 1531 aa9.11□□□□□ -0.95
UBR1-203ENST00000562173 WASLO00401 505 aaPredicted RBP9.11□□□□□ -0.95
UBR1-203ENST00000562173 GNRH1P01148 92 aa9.11□□□□□ -0.95
UBR1-203ENST00000562173 GTF2IP78347 998 aa9.11□□□□□ -0.95
UBR1-203ENST00000562173 TSGA10IPQ3SY00 556 aa9.11□□□□□ -0.95
UBR1-203ENST00000562173 KANK4Q5T7N3 995 aaPredicted RBP9.11□□□□□ -0.95
UBR1-203ENST00000562173 MRPL14Q6P1L8 145 aaKnown RBP9.11□□□□□ -0.95
UBR1-203ENST00000562173 ZFP42Q96MM3 310 aa9.11□□□□□ -0.95
UBR1-203ENST00000562173 VRTNQ9H8Y1 702 aa9.11□□□□□ -0.95
UBR1-203ENST00000562173 MKRN1Q9UHC7 482 aaKnown RBP9.11□□□□□ -0.95
UBR1-203ENST00000562173 PREX2Q70Z35 1606 aa9.11□□□□□ -0.95
UBR1-203ENST00000562173 NEURL4Q96JN8 1562 aa9.11□□□□□ -0.95
UBR1-203ENST00000562173 SIX5Q8N196 739 aa9.1□□□□□ -0.95
UBR1-203ENST00000562173 LARGE2Q8N3Y3 721 aa9.1□□□□□ -0.95
UBR1-203ENST00000562173 TSEN34Q9BSV6 310 aaKnown RBP9.1□□□□□ -0.95
UBR1-203ENST00000562173 POLR1AO95602 1720 aaPredicted RBP9.09□□□□□ -0.95
UBR1-203ENST00000562173 SAMD9LQ8IVG5 1584 aa9.09□□□□□ -0.95
UBR1-203ENST00000562173 WFS1O76024 890 aa9.09□□□□□ -0.95
UBR1-203ENST00000562173 UPP2O95045 317 aa9.09□□□□□ -0.95
UBR1-203ENST00000562173 ATG7O95352 703 aa9.09□□□□□ -0.95
UBR1-203ENST00000562173 SRPK2P78362 688 aaKnown RBP9.09□□□□□ -0.95
UBR1-203ENST00000562173 ELOAQ14241 798 aaKnown RBP9.09□□□□□ -0.95
UBR1-203ENST00000562173 ARHGAP35Q9NRY4 1499 aa9.08□□□□□ -0.96
UBR1-203ENST00000562173 REREQ9P2R6 1566 aa9.08□□□□□ -0.96
UBR1-203ENST00000562173 CEP170BQ9Y4F5 1589 aaPredicted RBP9.08□□□□□ -0.96
UBR1-203ENST00000562173 MROH2AA6NES4 1674 aa9.08□□□□□ -0.96
UBR1-203ENST00000562173 USP17L15C9J2P7 530 aa9.08□□□□□ -0.96
UBR1-203ENST00000562173 USP17L10C9JJH3 530 aa9.08□□□□□ -0.96
UBR1-203ENST00000562173 USP17L13C9JLJ4 530 aa9.08□□□□□ -0.96
UBR1-203ENST00000562173 USP17L12C9JPN9 530 aa9.08□□□□□ -0.96
UBR1-203ENST00000562173 USP17L11C9JVI0 530 aa9.08□□□□□ -0.96
UBR1-203ENST00000562173 USP17L21D6R901 530 aa9.08□□□□□ -0.96
UBR1-203ENST00000562173 USP17L18D6R9N7 530 aa9.08□□□□□ -0.96
UBR1-203ENST00000562173 USP17L22D6RA61 530 aa9.08□□□□□ -0.96
UBR1-203ENST00000562173 USP17L17D6RBQ6 530 aa9.08□□□□□ -0.96
UBR1-203ENST00000562173 USP17L19D6RCP7 530 aa9.08□□□□□ -0.96
UBR1-203ENST00000562173 USP17L20D6RJB6 530 aa9.08□□□□□ -0.96
UBR1-203ENST00000562173 TERTO14746 1132 aaKnown RBP9.08□□□□□ -0.96
UBR1-203ENST00000562173 USP17L24Q0WX57 530 aa9.08□□□□□ -0.96
UBR1-203ENST00000562173 ESCO1Q5FWF5 840 aa9.08□□□□□ -0.96
UBR1-203ENST00000562173 LARP1Q6PKG0 1096 aaKnown RBP9.08□□□□□ -0.96
UBR1-203ENST00000562173 LINC00528Q8N1L1 170 aa9.08□□□□□ -0.96
UBR1-203ENST00000562173 OGFOD1Q8N543 542 aa9.08□□□□□ -0.96
UBR1-203ENST00000562173 PURBQ96QR8 312 aaKnown RBP9.08□□□□□ -0.96
UBR1-203ENST00000562173 DNAAF2Q9NVR5 837 aaKnown RBP9.08□□□□□ -0.96
UBR1-203ENST00000562173 PCDHGA11Q9Y5H2 935 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms