RNA–Protein interactions for RNA: ENST00000561338.5

ALDH1A3-207, Transcript of aldehyde dehydrogenase 1 family member A3, humanhuman

TSL 4

Gene ALDH1A3, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A3-207ENST00000561338 SRP68Q9UHB9 627 aaKnown RBP22.23■■□□□ 1.15
ALDH1A3-207ENST00000561338 USP42Q9H9J4 1324 aaKnown RBP22.22■■□□□ 1.15
ALDH1A3-207ENST00000561338 TRAPPC3LQ5T215 181 aa22.21■■□□□ 1.15
ALDH1A3-207ENST00000561338 VSIG10Q8N0Z9 540 aa22.21■■□□□ 1.15
ALDH1A3-207ENST00000561338 NUP98P52948 1817 aa22.21■■□□□ 1.15
ALDH1A3-207ENST00000561338 PXDNLA1KZ92 1463 aa22.21■■□□□ 1.15
ALDH1A3-207ENST00000561338 THUMPD2Q9BTF0 503 aaKnown RBP22.2■■□□□ 1.14
ALDH1A3-207ENST00000561338 PRAMEF22A3QJZ6 481 aa22.19■■□□□ 1.14
ALDH1A3-207ENST00000561338 NFE2L2Q16236 605 aa22.19■■□□□ 1.14
ALDH1A3-207ENST00000561338 TTC5Q8N0Z6 440 aa22.19■■□□□ 1.14
ALDH1A3-207ENST00000561338 BTBD11A6QL63 1104 aa22.18■■□□□ 1.14
ALDH1A3-207ENST00000561338 MMP10P09238 476 aa22.18■■□□□ 1.14
ALDH1A3-207ENST00000561338 HTATSF1O43719 755 aaKnown RBP22.17■■□□□ 1.14
ALDH1A3-207ENST00000561338 FKBP8Q14318 412 aa22.16■■□□□ 1.14
ALDH1A3-207ENST00000561338 ANKRD36CQ5JPF3 1778 aa22.15■■□□□ 1.14
ALDH1A3-207ENST00000561338 MAPK8IP3Q9UPT6 1336 aa22.15■■□□□ 1.14
ALDH1A3-207ENST00000561338 RFC4P35249 363 aa22.15■■□□□ 1.14
ALDH1A3-207ENST00000561338 DDR1Q08345 913 aa22.15■■□□□ 1.14
ALDH1A3-207ENST00000561338 CCDC146Q8IYE0 955 aa22.15■■□□□ 1.14
ALDH1A3-207ENST00000561338 RTF1Q92541 710 aaKnown RBP22.15■■□□□ 1.14
ALDH1A3-207ENST00000561338 FMNL2Q96PY5 1086 aa22.15■■□□□ 1.14
ALDH1A3-207ENST00000561338 YBX3P16989 372 aaKnown RBP eCLIP22.14■■□□□ 1.13
ALDH1A3-207ENST00000561338 BCL2L12Q9HB09 334 aa22.14■■□□□ 1.13
ALDH1A3-207ENST00000561338 ARFGEF2Q9Y6D5 1785 aa22.14■■□□□ 1.13
ALDH1A3-207ENST00000561338 CCDC184Q52MB2 194 aa22.13■■□□□ 1.13
ALDH1A3-207ENST00000561338 MIS18AQ9NYP9 233 aa22.13■■□□□ 1.13
ALDH1A3-207ENST00000561338 CD2APQ9Y5K6 639 aa22.13■■□□□ 1.13
ALDH1A3-207ENST00000561338 ZNF316A6NFI3 1004 aaPredicted RBP22.12■■□□□ 1.13
ALDH1A3-207ENST00000561338 CANXP27824 592 aaKnown RBP22.12■■□□□ 1.13
ALDH1A3-207ENST00000561338 EIF5P55010 431 aaKnown RBP22.12■■□□□ 1.13
ALDH1A3-207ENST00000561338 USPL1Q5W0Q7 1092 aa22.12■■□□□ 1.13
ALDH1A3-207ENST00000561338 PIP4K2AP48426 406 aaPredicted RBP22.11■■□□□ 1.13
ALDH1A3-207ENST00000561338 SBF1O95248 1867 aa22.11■■□□□ 1.13
ALDH1A3-207ENST00000561338 A1BGP04217 495 aa22.1■■□□□ 1.13
ALDH1A3-207ENST00000561338 TMPOP42166 694 aaKnown RBP22.1■■□□□ 1.13
ALDH1A3-207ENST00000561338 CCDC88AQ3V6T2 1871 aa22.1■■□□□ 1.13
ALDH1A3-207ENST00000561338 NLGN1Q8N2Q7 840 aa22.1■■□□□ 1.13
ALDH1A3-207ENST00000561338 NARFQ9UHQ1 456 aa22.1■■□□□ 1.13
ALDH1A3-207ENST00000561338 RRP7AQ9Y3A4 280 aaKnown RBP22.1■■□□□ 1.13
ALDH1A3-207ENST00000561338 USP16Q9Y5T5 823 aa22.1■■□□□ 1.13
ALDH1A3-207ENST00000561338 ADAMTS8Q9UP79 889 aa22.09■■□□□ 1.13
ALDH1A3-207ENST00000561338 TNRC6CQ9HCJ0 1690 aaKnown RBP22.08■■□□□ 1.13
ALDH1A3-207ENST00000561338 NEFMP07197 916 aa22.08■■□□□ 1.13
ALDH1A3-207ENST00000561338 TAF7Q15545 349 aaPredicted RBP22.08■■□□□ 1.13
ALDH1A3-207ENST00000561338 WWC3Q9ULE0 1092 aa22.08■■□□□ 1.13
ALDH1A3-207ENST00000561338 CARMIL3Q8ND23 1372 aa22.08■■□□□ 1.12
ALDH1A3-207ENST00000561338 POLRMTO00411 1230 aaKnown RBP22.07■■□□□ 1.12
ALDH1A3-207ENST00000561338 STARD3NLO95772 234 aa22.07■■□□□ 1.12
ALDH1A3-207ENST00000561338 TM4SF1P30408 202 aa22.06■■□□□ 1.12
ALDH1A3-207ENST00000561338 RIPK4P57078 832 aa22.06■■□□□ 1.12
ALDH1A3-207ENST00000561338 PELP1Q8IZL8 1130 aaKnown RBP22.06■■□□□ 1.12
ALDH1A3-207ENST00000561338 NBPF26B4DH59 902 aa22.05■■□□□ 1.12
ALDH1A3-207ENST00000561338 NFIXQ14938 502 aa22.05■■□□□ 1.12
ALDH1A3-207ENST00000561338 WDR43Q15061 677 aaKnown RBP eCLIP22.05■■□□□ 1.12
ALDH1A3-207ENST00000561338 GPR162Q16538 588 aa22.05■■□□□ 1.12
ALDH1A3-207ENST00000561338 NBPF10Q6P3W6 841 aaKnown RBP22.05■■□□□ 1.12
ALDH1A3-207ENST00000561338 NBPF15Q8N660 670 aa22.05■■□□□ 1.12
ALDH1A3-207ENST00000561338 TEX13AQ9BXU3 409 aaPredicted RBP22.05■■□□□ 1.12
ALDH1A3-207ENST00000561338 PNNQ9H307 717 aaKnown RBP22.05■■□□□ 1.12
ALDH1A3-207ENST00000561338 TRIM35Q9UPQ4 493 aa22.05■■□□□ 1.12
ALDH1A3-207ENST00000561338 SNRPA1P09661 255 aaKnown RBP22.04■■□□□ 1.12
ALDH1A3-207ENST00000561338 YY1P25490 414 aa22.04■■□□□ 1.12
ALDH1A3-207ENST00000561338 IL6STP40189 918 aaPredicted RBP22.04■■□□□ 1.12
ALDH1A3-207ENST00000561338 EIF4A1P60842 406 aaKnown RBP22.04■■□□□ 1.12
ALDH1A3-207ENST00000561338 RUNDC1Q96C34 613 aa22.04■■□□□ 1.12
ALDH1A3-207ENST00000561338 LAMB2P55268 1798 aa22.03■■□□□ 1.12
ALDH1A3-207ENST00000561338 ZPR1O75312 459 aa22.03■■□□□ 1.12
ALDH1A3-207ENST00000561338 PARP3Q9Y6F1 533 aa22.03■■□□□ 1.12
ALDH1A3-207ENST00000561338 DCAF8L1A6NGE4 600 aa22.02■■□□□ 1.12
ALDH1A3-207ENST00000561338 TBC1D2BQ9UPU7 963 aa22.02■■□□□ 1.12
ALDH1A3-207ENST00000561338 ZNF330Q9Y3S2 320 aaPredicted RBP22.02■■□□□ 1.12
ALDH1A3-207ENST00000561338 CAMTA2O94983 1202 aa22.01■■□□□ 1.11
ALDH1A3-207ENST00000561338 NEUROD2Q15784 382 aa22.01■■□□□ 1.11
ALDH1A3-207ENST00000561338 TIAM2Q8IVF5 1701 aa22■■□□□ 1.11
ALDH1A3-207ENST00000561338 GIGYF1O75420 1035 aaPredicted RBP22■■□□□ 1.11
ALDH1A3-207ENST00000561338 TBC1D9BQ66K14 1250 aa22■■□□□ 1.11
ALDH1A3-207ENST00000561338 FER1L6Q2WGJ9 1857 aa22■■□□□ 1.11
ALDH1A3-207ENST00000561338 DPEP1P16444 411 aa21.99■■□□□ 1.11
ALDH1A3-207ENST00000561338 KCNA3P22001 575 aa21.99■■□□□ 1.11
ALDH1A3-207ENST00000561338 PNISRQ8TF01 805 aaKnown RBP21.99■■□□□ 1.11
ALDH1A3-207ENST00000561338 SLX4Q8IY92 1834 aa21.99■■□□□ 1.11
ALDH1A3-207ENST00000561338 A0A0G2JLW4 131 aa21.98■■□□□ 1.11
ALDH1A3-207ENST00000561338 A0A087WZG4 1122 aa21.97■■□□□ 1.11
ALDH1A3-207ENST00000561338 DZIP3Q86Y13 1208 aaKnown RBP21.97■■□□□ 1.11
ALDH1A3-207ENST00000561338 TSPYL4Q9UJ04 414 aa21.97■■□□□ 1.11
ALDH1A3-207ENST00000561338 DICER1Q9UPY3 1922 aaKnown RBP21.97■■□□□ 1.11
ALDH1A3-207ENST00000561338 LMOD3Q0VAK6 560 aa21.96■■□□□ 1.11
ALDH1A3-207ENST00000561338 KRT24Q2M2I5 525 aa21.96■■□□□ 1.11
ALDH1A3-207ENST00000561338 BICDL1Q6ZP65 573 aa21.96■■□□□ 1.11
ALDH1A3-207ENST00000561338 ADCY9O60503 1353 aa21.96■■□□□ 1.11
ALDH1A3-207ENST00000561338 CHRNA5P30532 468 aa21.95■■□□□ 1.1
ALDH1A3-207ENST00000561338 TGFB2P61812 414 aa21.95■■□□□ 1.1
ALDH1A3-207ENST00000561338 APAF1O14727 1248 aa21.94■■□□□ 1.1
ALDH1A3-207ENST00000561338 SERPINB2P05120 415 aa21.94■■□□□ 1.1
ALDH1A3-207ENST00000561338 LRP10Q7Z4F1 713 aa21.93■■□□□ 1.1
ALDH1A3-207ENST00000561338 DDX60Q8IY21 1712 aaKnown RBP21.93■■□□□ 1.1
ALDH1A3-207ENST00000561338 SENP3-EIF4A1A0A087X0R7 540 aa21.91■■□□□ 1.1
ALDH1A3-207ENST00000561338 CHL1O00533 1208 aa21.91■■□□□ 1.1
ALDH1A3-207ENST00000561338 BABAM1Q9NWV8 329 aa21.91■■□□□ 1.1
ALDH1A3-207ENST00000561338 GRIN3BO60391 1043 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms