RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 STARD3NLO95772 234 aa12.56□□□□□ -0.4
RABGGTA-221ENST00000561055 SSFA2P28290 1259 aa12.56□□□□□ -0.4
RABGGTA-221ENST00000561055 CRKLP46109 303 aaKnown RBP12.56□□□□□ -0.4
RABGGTA-221ENST00000561055 SLC16A10Q8TF71 515 aa12.56□□□□□ -0.4
RABGGTA-221ENST00000561055 AK7Q96M32 723 aa12.56□□□□□ -0.4
RABGGTA-221ENST00000561055 USP16Q9Y5T5 823 aa12.56□□□□□ -0.4
RABGGTA-221ENST00000561055 LRP5O75197 1615 aa12.55□□□□□ -0.4
RABGGTA-221ENST00000561055 PSDA5PKW4 1024 aaPredicted RBP12.55□□□□□ -0.4
RABGGTA-221ENST00000561055 ADRA2BP18089 450 aa12.55□□□□□ -0.4
RABGGTA-221ENST00000561055 MBIPQ9NS73 344 aa12.55□□□□□ -0.4
RABGGTA-221ENST00000561055 CCDC87Q9NVE4 849 aa12.55□□□□□ -0.4
RABGGTA-221ENST00000561055 HOXB7P09629 217 aa12.54□□□□□ -0.4
RABGGTA-221ENST00000561055 AMIGO3Q86WK7 504 aa12.54□□□□□ -0.4
RABGGTA-221ENST00000561055 COL23A1Q86Y22 540 aaPredicted RBP12.54□□□□□ -0.4
RABGGTA-221ENST00000561055 RTCBQ9Y3I0 505 aaKnown RBP12.54□□□□□ -0.4
RABGGTA-221ENST00000561055 SOS1Q07889 1333 aaPredicted RBP12.54□□□□□ -0.4
RABGGTA-221ENST00000561055 BCORQ6W2J9 1755 aa12.53□□□□□ -0.4
RABGGTA-221ENST00000561055 NUP98P52948 1817 aa12.53□□□□□ -0.4
RABGGTA-221ENST00000561055 PRAMEF22A3QJZ6 481 aa12.53□□□□□ -0.4
RABGGTA-221ENST00000561055 GNPATO15228 680 aa12.53□□□□□ -0.4
RABGGTA-221ENST00000561055 PDGFDQ9GZP0 370 aaPredicted RBP12.53□□□□□ -0.4
RABGGTA-221ENST00000561055 LAS1LQ9Y4W2 734 aaKnown RBP12.53□□□□□ -0.4
RABGGTA-221ENST00000561055 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.52□□□□□ -0.41
RABGGTA-221ENST00000561055 IL6STP40189 918 aaPredicted RBP12.52□□□□□ -0.41
RABGGTA-221ENST00000561055 EIF5P55010 431 aaKnown RBP12.52□□□□□ -0.41
RABGGTA-221ENST00000561055 TRAPPC3LQ5T215 181 aa12.52□□□□□ -0.41
RABGGTA-221ENST00000561055 ZBTB1Q9Y2K1 713 aa12.52□□□□□ -0.41
RABGGTA-221ENST00000561055 SALL2Q9Y467 1007 aaPredicted RBP12.52□□□□□ -0.41
RABGGTA-221ENST00000561055 ERBB4Q15303 1308 aa12.52□□□□□ -0.41
RABGGTA-221ENST00000561055 SENP3-EIF4A1A0A087X0R7 540 aa12.51□□□□□ -0.41
RABGGTA-221ENST00000561055 A1BGP04217 495 aa12.51□□□□□ -0.41
RABGGTA-221ENST00000561055 ARHGEF1Q92888 912 aaKnown RBP12.51□□□□□ -0.41
RABGGTA-221ENST00000561055 SCN7AQ01118 1682 aa12.51□□□□□ -0.41
RABGGTA-221ENST00000561055 GOLGA2Q08379 1002 aa12.5□□□□□ -0.41
RABGGTA-221ENST00000561055 MTFR1LQ9H019 292 aa12.5□□□□□ -0.41
RABGGTA-221ENST00000561055 SPINK5Q9NQ38 1064 aaPredicted RBP12.5□□□□□ -0.41
RABGGTA-221ENST00000561055 COL15A1P39059 1388 aa12.49□□□□□ -0.41
RABGGTA-221ENST00000561055 NBPF26B4DH59 902 aa12.49□□□□□ -0.41
RABGGTA-221ENST00000561055 CANXP27824 592 aaKnown RBP12.49□□□□□ -0.41
RABGGTA-221ENST00000561055 KRT24Q2M2I5 525 aa12.49□□□□□ -0.41
RABGGTA-221ENST00000561055 DUSP27Q5VZP5 1158 aa12.49□□□□□ -0.41
RABGGTA-221ENST00000561055 NBPF10Q6P3W6 841 aaKnown RBP12.49□□□□□ -0.41
RABGGTA-221ENST00000561055 TRMT2AQ8IZ69 625 aaKnown RBP12.49□□□□□ -0.41
RABGGTA-221ENST00000561055 NBPF15Q8N660 670 aa12.49□□□□□ -0.41
RABGGTA-221ENST00000561055 CHMP4AQ9BY43 222 aa12.49□□□□□ -0.41
RABGGTA-221ENST00000561055 MYH16Q9H6N6 1097 aa12.49□□□□□ -0.41
RABGGTA-221ENST00000561055 AFDNP55196 1824 aaKnown RBP12.48□□□□□ -0.41
RABGGTA-221ENST00000561055 KIF13BQ9NQT8 1826 aa12.48□□□□□ -0.41
RABGGTA-221ENST00000561055 FANCIQ9NVI1 1328 aa12.48□□□□□ -0.41
RABGGTA-221ENST00000561055 A0A087WZG4 1122 aa12.48□□□□□ -0.41
RABGGTA-221ENST00000561055 RGL2O15211 777 aa12.48□□□□□ -0.41
RABGGTA-221ENST00000561055 RFC4P35249 363 aa12.48□□□□□ -0.41
RABGGTA-221ENST00000561055 PDIA6Q15084 440 aa12.48□□□□□ -0.41
RABGGTA-221ENST00000561055 SMIM5Q71RC9 77 aa12.48□□□□□ -0.41
RABGGTA-221ENST00000561055 C8orf58Q8NAV2 365 aa12.48□□□□□ -0.41
RABGGTA-221ENST00000561055 TSR2Q969E8 191 aaKnown RBP12.48□□□□□ -0.41
RABGGTA-221ENST00000561055 SGIP1Q9BQI5 828 aa12.48□□□□□ -0.41
RABGGTA-221ENST00000561055 SPON1Q9HCB6 807 aa12.48□□□□□ -0.41
RABGGTA-221ENST00000561055 NARFQ9UHQ1 456 aa12.48□□□□□ -0.41
RABGGTA-221ENST00000561055 ANKRD36CQ5JPF3 1778 aa12.48□□□□□ -0.41
RABGGTA-221ENST00000561055 USP42Q9H9J4 1324 aaKnown RBP12.47□□□□□ -0.41
RABGGTA-221ENST00000561055 E9PSI1 815 aa12.47□□□□□ -0.41
RABGGTA-221ENST00000561055 PHF14O94880 888 aa12.47□□□□□ -0.41
RABGGTA-221ENST00000561055 SLFN5Q08AF3 891 aa12.47□□□□□ -0.41
RABGGTA-221ENST00000561055 LRP10Q7Z4F1 713 aa12.47□□□□□ -0.41
RABGGTA-221ENST00000561055 DDX21Q9NR30 783 aaKnown RBP eCLIP12.47□□□□□ -0.41
RABGGTA-221ENST00000561055 NRXN2Q9P2S2 1712 aa12.47□□□□□ -0.41
RABGGTA-221ENST00000561055 GYS1P13807 737 aa12.46□□□□□ -0.41
RABGGTA-221ENST00000561055 PTGER2P43116 358 aa12.46□□□□□ -0.41
RABGGTA-221ENST00000561055 NLGN1Q8N2Q7 840 aa12.46□□□□□ -0.41
RABGGTA-221ENST00000561055 TSPYL6Q8N831 410 aa12.46□□□□□ -0.41
RABGGTA-221ENST00000561055 MSH5O43196 834 aa12.45□□□□□ -0.42
RABGGTA-221ENST00000561055 VAMP4O75379 141 aa12.45□□□□□ -0.42
RABGGTA-221ENST00000561055 ZBTB7AO95365 584 aa12.45□□□□□ -0.42
RABGGTA-221ENST00000561055 EIF2S2P20042 333 aaKnown RBP12.45□□□□□ -0.42
RABGGTA-221ENST00000561055 TWISTNBQ3B726 338 aaPredicted RBP12.45□□□□□ -0.42
RABGGTA-221ENST00000561055 DBF4Q9UBU7 674 aaPredicted RBP12.45□□□□□ -0.42
RABGGTA-221ENST00000561055 ARFGEF2Q9Y6D5 1785 aa12.44□□□□□ -0.42
RABGGTA-221ENST00000561055 ZPR1O75312 459 aa12.44□□□□□ -0.42
RABGGTA-221ENST00000561055 HNRNPUQ00839 825 aaKnown RBP eCLIP12.44□□□□□ -0.42
RABGGTA-221ENST00000561055 EXOSC9Q06265 439 aaKnown RBP12.44□□□□□ -0.42
RABGGTA-221ENST00000561055 HDGFL1Q5TGJ6 251 aa12.44□□□□□ -0.42
RABGGTA-221ENST00000561055 CLEC4GQ6UXB4 293 aa12.44□□□□□ -0.42
RABGGTA-221ENST00000561055 BCL2L12Q9HB09 334 aa12.44□□□□□ -0.42
RABGGTA-221ENST00000561055 ATF5Q9Y2D1 282 aaPredicted RBP12.44□□□□□ -0.42
RABGGTA-221ENST00000561055 ZBED9Q6R2W3 1325 aa12.43□□□□□ -0.42
RABGGTA-221ENST00000561055 ERVV-1B6SEH8 477 aa12.43□□□□□ -0.42
RABGGTA-221ENST00000561055 ELL2O00472 640 aaPredicted RBP12.43□□□□□ -0.42
RABGGTA-221ENST00000561055 CAMTA2O94983 1202 aa12.43□□□□□ -0.42
RABGGTA-221ENST00000561055 TM4SF1P30408 202 aa12.43□□□□□ -0.42
RABGGTA-221ENST00000561055 PIP4K2AP48426 406 aaPredicted RBP12.43□□□□□ -0.42
RABGGTA-221ENST00000561055 CCDC30Q5VVM6 783 aa12.43□□□□□ -0.42
RABGGTA-221ENST00000561055 USPL1Q5W0Q7 1092 aa12.43□□□□□ -0.42
RABGGTA-221ENST00000561055 NPM2Q86SE8 214 aaKnown RBP12.43□□□□□ -0.42
RABGGTA-221ENST00000561055 DZIP3Q86Y13 1208 aaKnown RBP12.43□□□□□ -0.42
RABGGTA-221ENST00000561055 CDCA7LQ96GN5 454 aa12.43□□□□□ -0.42
RABGGTA-221ENST00000561055 HYPKQ9NX55 129 aa12.43□□□□□ -0.42
RABGGTA-221ENST00000561055 SRP68Q9UHB9 627 aaKnown RBP12.43□□□□□ -0.42
RABGGTA-221ENST00000561055 MYL6BP14649 208 aa12.42□□□□□ -0.42
RABGGTA-221ENST00000561055 PROSER3Q2NL68 480 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms