RNA–Protein interactions for RNA: ENST00000560619.2

SNRPCP18-201, Transcript of small nuclear ribonucleoprotein polypeptide C pseudogene 18, humanhuman

BASIC

Gene SNRPCP18, Length 439 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPCP18-201ENST00000560619 CASZ1Q86V15 1759 aa14.5□□□□□ -0.09
SNRPCP18-201ENST00000560619 PNPLA7Q6ZV29 1317 aa14.5□□□□□ -0.09
SNRPCP18-201ENST00000560619 ZNF521Q96K83 1311 aa14.5□□□□□ -0.09
SNRPCP18-201ENST00000560619 HNRNPUQ00839 825 aaKnown RBP eCLIP14.5□□□□□ -0.09
SNRPCP18-201ENST00000560619 INTS5Q6P9B9 1019 aaKnown RBP14.5□□□□□ -0.09
SNRPCP18-201ENST00000560619 CCDC87Q9NVE4 849 aa14.5□□□□□ -0.09
SNRPCP18-201ENST00000560619 MIS18AQ9NYP9 233 aa14.5□□□□□ -0.09
SNRPCP18-201ENST00000560619 ERBB4Q15303 1308 aa14.49□□□□□ -0.09
SNRPCP18-201ENST00000560619 TRAPPC3LQ5T215 181 aa14.49□□□□□ -0.09
SNRPCP18-201ENST00000560619 TUBGCP6Q96RT7 1819 aa14.49□□□□□ -0.09
SNRPCP18-201ENST00000560619 LAMB4A4D0S4 1761 aa14.48□□□□□ -0.09
SNRPCP18-201ENST00000560619 GNPATO15228 680 aa14.48□□□□□ -0.09
SNRPCP18-201ENST00000560619 IL6STP40189 918 aaPredicted RBP14.48□□□□□ -0.09
SNRPCP18-201ENST00000560619 MBIPQ9NS73 344 aa14.48□□□□□ -0.09
SNRPCP18-201ENST00000560619 USP16Q9Y5T5 823 aa14.48□□□□□ -0.09
SNRPCP18-201ENST00000560619 COL24A1Q17RW2 1714 aa14.47□□□□□ -0.09
SNRPCP18-201ENST00000560619 A0A087WZG4 1122 aa14.47□□□□□ -0.09
SNRPCP18-201ENST00000560619 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.47□□□□□ -0.09
SNRPCP18-201ENST00000560619 PSDA5PKW4 1024 aaPredicted RBP14.47□□□□□ -0.09
SNRPCP18-201ENST00000560619 RGL2O15211 777 aa14.47□□□□□ -0.09
SNRPCP18-201ENST00000560619 COL23A1Q86Y22 540 aaPredicted RBP14.47□□□□□ -0.09
SNRPCP18-201ENST00000560619 MTFR1LQ9H019 292 aa14.47□□□□□ -0.09
SNRPCP18-201ENST00000560619 EIF5P55010 431 aaKnown RBP14.46□□□□□ -0.09
SNRPCP18-201ENST00000560619 LAS1LQ9Y4W2 734 aaKnown RBP14.46□□□□□ -0.09
SNRPCP18-201ENST00000560619 MYH16Q9H6N6 1097 aa14.45□□□□□ -0.1
SNRPCP18-201ENST00000560619 GOLGA2Q08379 1002 aa14.44□□□□□ -0.1
SNRPCP18-201ENST00000560619 ARHGEF1Q92888 912 aaKnown RBP14.44□□□□□ -0.1
SNRPCP18-201ENST00000560619 SPON1Q9HCB6 807 aa14.44□□□□□ -0.1
SNRPCP18-201ENST00000560619 ZBTB1Q9Y2K1 713 aa14.44□□□□□ -0.1
SNRPCP18-201ENST00000560619 E9PSI1 815 aa14.43□□□□□ -0.1
SNRPCP18-201ENST00000560619 A1BGP04217 495 aa14.43□□□□□ -0.1
SNRPCP18-201ENST00000560619 RFC4P35249 363 aa14.43□□□□□ -0.1
SNRPCP18-201ENST00000560619 NPM2Q86SE8 214 aaKnown RBP14.43□□□□□ -0.1
SNRPCP18-201ENST00000560619 NLGN1Q8N2Q7 840 aa14.43□□□□□ -0.1
SNRPCP18-201ENST00000560619 NARFQ9UHQ1 456 aa14.43□□□□□ -0.1
SNRPCP18-201ENST00000560619 LRP5O75197 1615 aa14.43□□□□□ -0.1
SNRPCP18-201ENST00000560619 COL15A1P39059 1388 aa14.43□□□□□ -0.1
SNRPCP18-201ENST00000560619 SENP3-EIF4A1A0A087X0R7 540 aa14.42□□□□□ -0.1
SNRPCP18-201ENST00000560619 PRAMEF22A3QJZ6 481 aa14.42□□□□□ -0.1
SNRPCP18-201ENST00000560619 DUSP27Q5VZP5 1158 aa14.42□□□□□ -0.1
SNRPCP18-201ENST00000560619 AMIGO3Q86WK7 504 aa14.42□□□□□ -0.1
SNRPCP18-201ENST00000560619 USP42Q9H9J4 1324 aaKnown RBP14.41□□□□□ -0.1
SNRPCP18-201ENST00000560619 CENPBP07199 599 aaPredicted RBP14.41□□□□□ -0.1
SNRPCP18-201ENST00000560619 CANXP27824 592 aaKnown RBP14.41□□□□□ -0.1
SNRPCP18-201ENST00000560619 SGIP1Q9BQI5 828 aa14.41□□□□□ -0.1
SNRPCP18-201ENST00000560619 PDGFDQ9GZP0 370 aaPredicted RBP14.41□□□□□ -0.1
SNRPCP18-201ENST00000560619 SALL2Q9Y467 1007 aaPredicted RBP14.41□□□□□ -0.1
SNRPCP18-201ENST00000560619 CACNA1FO60840 1977 aa14.41□□□□□ -0.1
SNRPCP18-201ENST00000560619 C4AP0C0L4 1744 aa14.41□□□□□ -0.1
SNRPCP18-201ENST00000560619 FANCIQ9NVI1 1328 aa14.41□□□□□ -0.1
SNRPCP18-201ENST00000560619 NBPF26B4DH59 902 aa14.4□□□□□ -0.1
SNRPCP18-201ENST00000560619 ZPR1O75312 459 aa14.4□□□□□ -0.1
SNRPCP18-201ENST00000560619 PHF14O94880 888 aa14.4□□□□□ -0.1
SNRPCP18-201ENST00000560619 NBPF10Q6P3W6 841 aaKnown RBP14.4□□□□□ -0.1
SNRPCP18-201ENST00000560619 CLEC4GQ6UXB4 293 aa14.4□□□□□ -0.1
SNRPCP18-201ENST00000560619 TRMT2AQ8IZ69 625 aaKnown RBP14.4□□□□□ -0.1
SNRPCP18-201ENST00000560619 NBPF15Q8N660 670 aa14.4□□□□□ -0.1
SNRPCP18-201ENST00000560619 DDX21Q9NR30 783 aaKnown RBP eCLIP14.4□□□□□ -0.1
SNRPCP18-201ENST00000560619 DBF4Q9UBU7 674 aaPredicted RBP14.4□□□□□ -0.1
SNRPCP18-201ENST00000560619 ZBED9Q6R2W3 1325 aa14.4□□□□□ -0.1
SNRPCP18-201ENST00000560619 ERVV-1B6SEH8 477 aa14.39□□□□□ -0.11
SNRPCP18-201ENST00000560619 MSH5O43196 834 aa14.39□□□□□ -0.11
SNRPCP18-201ENST00000560619 GYS1P13807 737 aa14.39□□□□□ -0.11
SNRPCP18-201ENST00000560619 POLD1P28340 1107 aa14.39□□□□□ -0.11
SNRPCP18-201ENST00000560619 SLFN5Q08AF3 891 aa14.39□□□□□ -0.11
SNRPCP18-201ENST00000560619 PDIA6Q15084 440 aa14.39□□□□□ -0.11
SNRPCP18-201ENST00000560619 C8orf58Q8NAV2 365 aa14.39□□□□□ -0.11
SNRPCP18-201ENST00000560619 ZBTB7AO95365 584 aa14.38□□□□□ -0.11
SNRPCP18-201ENST00000560619 CT47B1P0C2W7 299 aaPredicted RBP14.38□□□□□ -0.11
SNRPCP18-201ENST00000560619 EIF2S2P20042 333 aaKnown RBP14.38□□□□□ -0.11
SNRPCP18-201ENST00000560619 PTGER2P43116 358 aa14.38□□□□□ -0.11
SNRPCP18-201ENST00000560619 HDGFL1Q5TGJ6 251 aa14.38□□□□□ -0.11
SNRPCP18-201ENST00000560619 CCDC30Q5VVM6 783 aa14.38□□□□□ -0.11
SNRPCP18-201ENST00000560619 LRP10Q7Z4F1 713 aa14.38□□□□□ -0.11
SNRPCP18-201ENST00000560619 TSR2Q969E8 191 aaKnown RBP14.38□□□□□ -0.11
SNRPCP18-201ENST00000560619 ZNF428Q96B54 188 aa14.38□□□□□ -0.11
SNRPCP18-201ENST00000560619 SPINK5Q9NQ38 1064 aaPredicted RBP14.38□□□□□ -0.11
SNRPCP18-201ENST00000560619 HYPKQ9NX55 129 aa14.38□□□□□ -0.11
SNRPCP18-201ENST00000560619 KRT24Q2M2I5 525 aa14.37□□□□□ -0.11
SNRPCP18-201ENST00000560619 TWISTNBQ3B726 338 aaPredicted RBP14.37□□□□□ -0.11
SNRPCP18-201ENST00000560619 VAMP4O75379 141 aa14.36□□□□□ -0.11
SNRPCP18-201ENST00000560619 TM4SF1P30408 202 aa14.36□□□□□ -0.11
SNRPCP18-201ENST00000560619 DZIP3Q86Y13 1208 aaKnown RBP14.36□□□□□ -0.11
SNRPCP18-201ENST00000560619 ZNF652Q9Y2D9 606 aa14.36□□□□□ -0.11
SNRPCP18-201ENST00000560619 CAMTA2O94983 1202 aa14.35□□□□□ -0.11
SNRPCP18-201ENST00000560619 USPL1Q5W0Q7 1092 aa14.35□□□□□ -0.11
SNRPCP18-201ENST00000560619 TSPYL6Q8N831 410 aa14.35□□□□□ -0.11
SNRPCP18-201ENST00000560619 ATF5Q9Y2D1 282 aaPredicted RBP14.35□□□□□ -0.11
SNRPCP18-201ENST00000560619 SCN7AQ01118 1682 aa14.35□□□□□ -0.11
SNRPCP18-201ENST00000560619 BCORQ6W2J9 1755 aa14.34□□□□□ -0.11
SNRPCP18-201ENST00000560619 EXOSC9Q06265 439 aaKnown RBP14.34□□□□□ -0.11
SNRPCP18-201ENST00000560619 SMIM5Q71RC9 77 aa14.34□□□□□ -0.11
SNRPCP18-201ENST00000560619 BCL2L12Q9HB09 334 aa14.34□□□□□ -0.11
SNRPCP18-201ENST00000560619 TBC1D2BQ9UPU7 963 aa14.34□□□□□ -0.11
SNRPCP18-201ENST00000560619 MAP3K15Q6ZN16 1313 aa14.34□□□□□ -0.11
SNRPCP18-201ENST00000560619 ELL2O00472 640 aaPredicted RBP14.33□□□□□ -0.12
SNRPCP18-201ENST00000560619 FKBP8Q14318 412 aa14.33□□□□□ -0.12
SNRPCP18-201ENST00000560619 KIF6Q6ZMV9 814 aa14.33□□□□□ -0.12
SNRPCP18-201ENST00000560619 ARXQ96QS3 562 aa14.33□□□□□ -0.12
SNRPCP18-201ENST00000560619 STK31Q9BXU1 1019 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms