RNA–Protein interactions for RNA: ENST00000560273.2

TUBBP8-201, Transcript of tubulin beta class I pseudogene 8, humanhuman

BASIC

Gene TUBBP8, Length 1,232 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBBP8-201ENST00000560273 RTCBQ9Y3I0 505 aaKnown RBP12.24□□□□□ -0.45
TUBBP8-201ENST00000560273 USP16Q9Y5T5 823 aa12.24□□□□□ -0.45
TUBBP8-201ENST00000560273 PRAMEF22A3QJZ6 481 aa12.23□□□□□ -0.45
TUBBP8-201ENST00000560273 RPS6KA4O75676 772 aa12.23□□□□□ -0.45
TUBBP8-201ENST00000560273 HNRNPUQ00839 825 aaKnown RBP eCLIP12.23□□□□□ -0.45
TUBBP8-201ENST00000560273 INTS5Q6P9B9 1019 aaKnown RBP12.23□□□□□ -0.45
TUBBP8-201ENST00000560273 FLAD1Q8NFF5 587 aa12.23□□□□□ -0.45
TUBBP8-201ENST00000560273 CCDC87Q9NVE4 849 aa12.23□□□□□ -0.45
TUBBP8-201ENST00000560273 KCPQ6ZWJ8 1503 aa12.22□□□□□ -0.45
TUBBP8-201ENST00000560273 PHF14O94880 888 aa12.22□□□□□ -0.45
TUBBP8-201ENST00000560273 CANXP27824 592 aaKnown RBP12.22□□□□□ -0.45
TUBBP8-201ENST00000560273 GOLGA2Q08379 1002 aa12.22□□□□□ -0.45
TUBBP8-201ENST00000560273 TRAPPC3LQ5T215 181 aa12.22□□□□□ -0.45
TUBBP8-201ENST00000560273 NPM2Q86SE8 214 aaKnown RBP12.22□□□□□ -0.45
TUBBP8-201ENST00000560273 TSR2Q969E8 191 aaKnown RBP12.22□□□□□ -0.45
TUBBP8-201ENST00000560273 MYH16Q9H6N6 1097 aa12.22□□□□□ -0.45
TUBBP8-201ENST00000560273 RGPD3A6NKT7 1758 aaPredicted RBP12.22□□□□□ -0.45
TUBBP8-201ENST00000560273 RGPD4Q7Z3J3 1758 aa12.22□□□□□ -0.45
TUBBP8-201ENST00000560273 ZNF521Q96K83 1311 aa12.21□□□□□ -0.45
TUBBP8-201ENST00000560273 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.21□□□□□ -0.45
TUBBP8-201ENST00000560273 A1BGP04217 495 aa12.21□□□□□ -0.45
TUBBP8-201ENST00000560273 EIF2S2P20042 333 aaKnown RBP12.21□□□□□ -0.45
TUBBP8-201ENST00000560273 SSFA2P28290 1259 aa12.21□□□□□ -0.45
TUBBP8-201ENST00000560273 KRT24Q2M2I5 525 aa12.21□□□□□ -0.45
TUBBP8-201ENST00000560273 ZBTB1Q9Y2K1 713 aa12.21□□□□□ -0.45
TUBBP8-201ENST00000560273 PNPLA7Q6ZV29 1317 aa12.2□□□□□ -0.46
TUBBP8-201ENST00000560273 ELL2O00472 640 aaPredicted RBP12.2□□□□□ -0.46
TUBBP8-201ENST00000560273 DUSP27Q5VZP5 1158 aa12.2□□□□□ -0.46
TUBBP8-201ENST00000560273 SMIM5Q71RC9 77 aa12.2□□□□□ -0.46
TUBBP8-201ENST00000560273 COL23A1Q86Y22 540 aaPredicted RBP12.2□□□□□ -0.46
TUBBP8-201ENST00000560273 ZNF219Q9P2Y4 722 aaPredicted RBP12.2□□□□□ -0.46
TUBBP8-201ENST00000560273 ATF5Q9Y2D1 282 aaPredicted RBP12.2□□□□□ -0.46
TUBBP8-201ENST00000560273 LY75O60449 1722 aa12.2□□□□□ -0.46
TUBBP8-201ENST00000560273 E9PSI1 815 aa12.19□□□□□ -0.46
TUBBP8-201ENST00000560273 HOXB7P09629 217 aa12.19□□□□□ -0.46
TUBBP8-201ENST00000560273 RFC4P35249 363 aa12.19□□□□□ -0.46
TUBBP8-201ENST00000560273 IL6STP40189 918 aaPredicted RBP12.19□□□□□ -0.46
TUBBP8-201ENST00000560273 AMIGO3Q86WK7 504 aa12.19□□□□□ -0.46
TUBBP8-201ENST00000560273 C8orf58Q8NAV2 365 aa12.19□□□□□ -0.46
TUBBP8-201ENST00000560273 ARHGEF1Q92888 912 aaKnown RBP12.19□□□□□ -0.46
TUBBP8-201ENST00000560273 CHMP4AQ9BY43 222 aa12.19□□□□□ -0.46
TUBBP8-201ENST00000560273 PDGFDQ9GZP0 370 aaPredicted RBP12.19□□□□□ -0.46
TUBBP8-201ENST00000560273 ZNF330Q9Y3S2 320 aaPredicted RBP12.19□□□□□ -0.46
TUBBP8-201ENST00000560273 DLG5Q8TDM6 1919 aa12.19□□□□□ -0.46
TUBBP8-201ENST00000560273 RREB1Q92766 1687 aa12.19□□□□□ -0.46
TUBBP8-201ENST00000560273 FANCIQ9NVI1 1328 aa12.18□□□□□ -0.46
TUBBP8-201ENST00000560273 A0A087WZG4 1122 aa12.18□□□□□ -0.46
TUBBP8-201ENST00000560273 EIF5P55010 431 aaKnown RBP12.18□□□□□ -0.46
TUBBP8-201ENST00000560273 SLC16A10Q8TF71 515 aa12.18□□□□□ -0.46
TUBBP8-201ENST00000560273 ARXQ96QS3 562 aa12.18□□□□□ -0.46
TUBBP8-201ENST00000560273 PAPPAQ13219 1627 aa12.18□□□□□ -0.46
TUBBP8-201ENST00000560273 NUP188Q5SRE5 1749 aa12.17□□□□□ -0.46
TUBBP8-201ENST00000560273 SOS1Q07889 1333 aaPredicted RBP12.17□□□□□ -0.46
TUBBP8-201ENST00000560273 ZBTB7AO95365 584 aa12.17□□□□□ -0.46
TUBBP8-201ENST00000560273 PIP4K2AP48426 406 aaPredicted RBP12.17□□□□□ -0.46
TUBBP8-201ENST00000560273 EXOSC9Q06265 439 aaKnown RBP12.17□□□□□ -0.46
TUBBP8-201ENST00000560273 SLFN5Q08AF3 891 aa12.17□□□□□ -0.46
TUBBP8-201ENST00000560273 TWISTNBQ3B726 338 aaPredicted RBP12.17□□□□□ -0.46
TUBBP8-201ENST00000560273 HDGFL1Q5TGJ6 251 aa12.17□□□□□ -0.46
TUBBP8-201ENST00000560273 NECTIN2Q92692 538 aa12.17□□□□□ -0.46
TUBBP8-201ENST00000560273 CDCA7LQ96GN5 454 aa12.17□□□□□ -0.46
TUBBP8-201ENST00000560273 SIPA1L3O60292 1781 aaPredicted RBP12.17□□□□□ -0.46
TUBBP8-201ENST00000560273 ERBB4Q15303 1308 aa12.16□□□□□ -0.46
TUBBP8-201ENST00000560273 NBPF26B4DH59 902 aa12.16□□□□□ -0.46
TUBBP8-201ENST00000560273 ZPR1O75312 459 aa12.16□□□□□ -0.46
TUBBP8-201ENST00000560273 MYL6BP14649 208 aa12.16□□□□□ -0.46
TUBBP8-201ENST00000560273 DSG3P32926 999 aa12.16□□□□□ -0.46
TUBBP8-201ENST00000560273 NBPF10Q6P3W6 841 aaKnown RBP12.16□□□□□ -0.46
TUBBP8-201ENST00000560273 NBPF15Q8N660 670 aa12.16□□□□□ -0.46
TUBBP8-201ENST00000560273 TSPYL6Q8N831 410 aa12.16□□□□□ -0.46
TUBBP8-201ENST00000560273 MTFR1LQ9H019 292 aa12.16□□□□□ -0.46
TUBBP8-201ENST00000560273 C4BP0C0L5 1744 aa12.15□□□□□ -0.46
TUBBP8-201ENST00000560273 CCDC30Q5VVM6 783 aa12.15□□□□□ -0.46
TUBBP8-201ENST00000560273 SPON1Q9HCB6 807 aa12.15□□□□□ -0.46
TUBBP8-201ENST00000560273 DBF4Q9UBU7 674 aaPredicted RBP12.15□□□□□ -0.46
TUBBP8-201ENST00000560273 ZNF831Q5JPB2 1677 aa12.15□□□□□ -0.46
TUBBP8-201ENST00000560273 ABCB7O75027 752 aa12.14□□□□□ -0.47
TUBBP8-201ENST00000560273 DZIP3Q86Y13 1208 aaKnown RBP12.14□□□□□ -0.47
TUBBP8-201ENST00000560273 NLGN1Q8N2Q7 840 aa12.14□□□□□ -0.47
TUBBP8-201ENST00000560273 DDX21Q9NR30 783 aaKnown RBP eCLIP12.14□□□□□ -0.47
TUBBP8-201ENST00000560273 CHPF2Q9P2E5 772 aa12.14□□□□□ -0.47
TUBBP8-201ENST00000560273 NARFQ9UHQ1 456 aa12.14□□□□□ -0.47
TUBBP8-201ENST00000560273 TBC1D2BQ9UPU7 963 aa12.14□□□□□ -0.47
TUBBP8-201ENST00000560273 COL15A1P39059 1388 aa12.14□□□□□ -0.47
TUBBP8-201ENST00000560273 ZBED9Q6R2W3 1325 aa12.13□□□□□ -0.47
TUBBP8-201ENST00000560273 C5P01031 1676 aa12.13□□□□□ -0.47
TUBBP8-201ENST00000560273 UBR2Q8IWV8 1755 aa12.13□□□□□ -0.47
TUBBP8-201ENST00000560273 VAMP4O75379 141 aa12.13□□□□□ -0.47
TUBBP8-201ENST00000560273 ANXA1P04083 346 aa12.13□□□□□ -0.47
TUBBP8-201ENST00000560273 POLD1P28340 1107 aa12.13□□□□□ -0.47
TUBBP8-201ENST00000560273 PDIA6Q15084 440 aa12.13□□□□□ -0.47
TUBBP8-201ENST00000560273 USPL1Q5W0Q7 1092 aa12.13□□□□□ -0.47
TUBBP8-201ENST00000560273 TRMT2AQ8IZ69 625 aaKnown RBP12.13□□□□□ -0.47
TUBBP8-201ENST00000560273 STK31Q9BXU1 1019 aa12.13□□□□□ -0.47
TUBBP8-201ENST00000560273 SRP68Q9UHB9 627 aaKnown RBP12.13□□□□□ -0.47
TUBBP8-201ENST00000560273 VIRMAQ69YN4 1812 aaKnown RBP12.13□□□□□ -0.47
TUBBP8-201ENST00000560273 KDM3BQ7LBC6 1761 aa12.13□□□□□ -0.47
TUBBP8-201ENST00000560273 USP42Q9H9J4 1324 aaKnown RBP12.12□□□□□ -0.47
TUBBP8-201ENST00000560273 TJP1Q07157 1748 aa12.12□□□□□ -0.47
TUBBP8-201ENST00000560273 GYS1P13807 737 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms