RNA–Protein interactions for RNA: ENST00000560213.1

LRRC28-217, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-217ENST00000560213 TUBGCP6Q96RT7 1819 aa21.24■□□□□ 0.99
LRRC28-217ENST00000560213 IL16Q14005 1332 aa21.24■□□□□ 0.99
LRRC28-217ENST00000560213 PNPLA7Q6ZV29 1317 aa21.24■□□□□ 0.99
LRRC28-217ENST00000560213 QSER1Q2KHR3 1735 aa21.24■□□□□ 0.99
LRRC28-217ENST00000560213 RPS6KA4O75676 772 aa21.23■□□□□ 0.99
LRRC28-217ENST00000560213 PHF14O94880 888 aa21.23■□□□□ 0.99
LRRC28-217ENST00000560213 INTS5Q6P9B9 1019 aaKnown RBP21.23■□□□□ 0.99
LRRC28-217ENST00000560213 UBR3Q6ZT12 1888 aa21.23■□□□□ 0.99
LRRC28-217ENST00000560213 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.22■□□□□ 0.99
LRRC28-217ENST00000560213 SSFA2P28290 1259 aa21.22■□□□□ 0.99
LRRC28-217ENST00000560213 COL23A1Q86Y22 540 aaPredicted RBP21.22■□□□□ 0.99
LRRC28-217ENST00000560213 PDGFDQ9GZP0 370 aaPredicted RBP21.22■□□□□ 0.99
LRRC28-217ENST00000560213 CANXP27824 592 aaKnown RBP21.21■□□□□ 0.99
LRRC28-217ENST00000560213 TRAPPC3LQ5T215 181 aa21.21■□□□□ 0.99
LRRC28-217ENST00000560213 SMIM5Q71RC9 77 aa21.21■□□□□ 0.99
LRRC28-217ENST00000560213 AMIGO3Q86WK7 504 aa21.2■□□□□ 0.98
LRRC28-217ENST00000560213 ZBTB1Q9Y2K1 713 aa21.2■□□□□ 0.98
LRRC28-217ENST00000560213 A1BGP04217 495 aa21.19■□□□□ 0.98
LRRC28-217ENST00000560213 ADRA2BP18089 450 aa21.19■□□□□ 0.98
LRRC28-217ENST00000560213 KRT24Q2M2I5 525 aa21.18■□□□□ 0.98
LRRC28-217ENST00000560213 SLC16A10Q8TF71 515 aa21.18■□□□□ 0.98
LRRC28-217ENST00000560213 TSR2Q969E8 191 aaKnown RBP21.18■□□□□ 0.98
LRRC28-217ENST00000560213 CASZ1Q86V15 1759 aa21.18■□□□□ 0.98
LRRC28-217ENST00000560213 EIF2S2P20042 333 aaKnown RBP21.17■□□□□ 0.98
LRRC28-217ENST00000560213 RFC4P35249 363 aa21.17■□□□□ 0.98
LRRC28-217ENST00000560213 NPM2Q86SE8 214 aaKnown RBP21.17■□□□□ 0.98
LRRC28-217ENST00000560213 ARHGEF1Q92888 912 aaKnown RBP21.17■□□□□ 0.98
LRRC28-217ENST00000560213 ZNF521Q96K83 1311 aa21.17■□□□□ 0.98
LRRC28-217ENST00000560213 LAMB4A4D0S4 1761 aa21.17■□□□□ 0.98
LRRC28-217ENST00000560213 SOS1Q07889 1333 aaPredicted RBP21.16■□□□□ 0.98
LRRC28-217ENST00000560213 ZBTB7AO95365 584 aa21.16■□□□□ 0.98
LRRC28-217ENST00000560213 DUSP27Q5VZP5 1158 aa21.16■□□□□ 0.98
LRRC28-217ENST00000560213 MYH16Q9H6N6 1097 aa21.16■□□□□ 0.98
LRRC28-217ENST00000560213 ZNF330Q9Y3S2 320 aaPredicted RBP21.16■□□□□ 0.98
LRRC28-217ENST00000560213 IL6STP40189 918 aaPredicted RBP21.15■□□□□ 0.98
LRRC28-217ENST00000560213 HNRNPUQ00839 825 aaKnown RBP eCLIP21.15■□□□□ 0.98
LRRC28-217ENST00000560213 GOLGA2Q08379 1002 aa21.15■□□□□ 0.98
LRRC28-217ENST00000560213 ELL2O00472 640 aaPredicted RBP21.14■□□□□ 0.97
LRRC28-217ENST00000560213 HOXB7P09629 217 aa21.14■□□□□ 0.97
LRRC28-217ENST00000560213 PIP4K2AP48426 406 aaPredicted RBP21.14■□□□□ 0.97
LRRC28-217ENST00000560213 MTFR1LQ9H019 292 aa21.14■□□□□ 0.97
LRRC28-217ENST00000560213 SPINK5Q9NQ38 1064 aaPredicted RBP21.14■□□□□ 0.97
LRRC28-217ENST00000560213 ATF5Q9Y2D1 282 aaPredicted RBP21.14■□□□□ 0.97
LRRC28-217ENST00000560213 FANCIQ9NVI1 1328 aa21.13■□□□□ 0.97
LRRC28-217ENST00000560213 A0A087WZG4 1122 aa21.13■□□□□ 0.97
LRRC28-217ENST00000560213 EIF5P55010 431 aaKnown RBP21.13■□□□□ 0.97
LRRC28-217ENST00000560213 C8orf58Q8NAV2 365 aa21.13■□□□□ 0.97
LRRC28-217ENST00000560213 NECTIN2Q92692 538 aa21.13■□□□□ 0.97
LRRC28-217ENST00000560213 SPON1Q9HCB6 807 aa21.13■□□□□ 0.97
LRRC28-217ENST00000560213 COL15A1P39059 1388 aa21.12■□□□□ 0.97
LRRC28-217ENST00000560213 NBPF26B4DH59 902 aa21.12■□□□□ 0.97
LRRC28-217ENST00000560213 NBPF10Q6P3W6 841 aaKnown RBP21.12■□□□□ 0.97
LRRC28-217ENST00000560213 NBPF15Q8N660 670 aa21.12■□□□□ 0.97
LRRC28-217ENST00000560213 ARXQ96QS3 562 aa21.12■□□□□ 0.97
LRRC28-217ENST00000560213 ERBB4Q15303 1308 aa21.11■□□□□ 0.97
LRRC28-217ENST00000560213 E9PSI1 815 aa21.11■□□□□ 0.97
LRRC28-217ENST00000560213 ZPR1O75312 459 aa21.11■□□□□ 0.97
LRRC28-217ENST00000560213 HDGFL1Q5TGJ6 251 aa21.11■□□□□ 0.97
LRRC28-217ENST00000560213 MYL6BP14649 208 aa21.1■□□□□ 0.97
LRRC28-217ENST00000560213 MSL1Q68DK7 614 aa21.1■□□□□ 0.97
LRRC28-217ENST00000560213 CHMP4AQ9BY43 222 aa21.1■□□□□ 0.97
LRRC28-217ENST00000560213 EXOSC9Q06265 439 aaKnown RBP21.09■□□□□ 0.97
LRRC28-217ENST00000560213 TSPYL6Q8N831 410 aa21.09■□□□□ 0.97
LRRC28-217ENST00000560213 SRP68Q9UHB9 627 aaKnown RBP21.09■□□□□ 0.97
LRRC28-217ENST00000560213 NARFQ9UHQ1 456 aa21.09■□□□□ 0.97
LRRC28-217ENST00000560213 TBC1D2BQ9UPU7 963 aa21.09■□□□□ 0.97
LRRC28-217ENST00000560213 C4AP0C0L4 1744 aa21.09■□□□□ 0.97
LRRC28-217ENST00000560213 USP42Q9H9J4 1324 aaKnown RBP21.08■□□□□ 0.97
LRRC28-217ENST00000560213 SLFN5Q08AF3 891 aa21.08■□□□□ 0.97
LRRC28-217ENST00000560213 TWISTNBQ3B726 338 aaPredicted RBP21.08■□□□□ 0.97
LRRC28-217ENST00000560213 USPL1Q5W0Q7 1092 aa21.08■□□□□ 0.97
LRRC28-217ENST00000560213 DZIP3Q86Y13 1208 aaKnown RBP21.07■□□□□ 0.96
LRRC28-217ENST00000560213 NLGN1Q8N2Q7 840 aa21.07■□□□□ 0.96
LRRC28-217ENST00000560213 CDCA7LQ96GN5 454 aa21.07■□□□□ 0.96
LRRC28-217ENST00000560213 GYS1P13807 737 aa21.06■□□□□ 0.96
LRRC28-217ENST00000560213 POLD1P28340 1107 aa21.06■□□□□ 0.96
LRRC28-217ENST00000560213 PDIA6Q15084 440 aa21.06■□□□□ 0.96
LRRC28-217ENST00000560213 CCDC30Q5VVM6 783 aa21.06■□□□□ 0.96
LRRC28-217ENST00000560213 DDX21Q9NR30 783 aaKnown RBP eCLIP21.06■□□□□ 0.96
LRRC28-217ENST00000560213 CHPF2Q9P2E5 772 aa21.06■□□□□ 0.96
LRRC28-217ENST00000560213 DBF4Q9UBU7 674 aaPredicted RBP21.06■□□□□ 0.96
LRRC28-217ENST00000560213 ANXA1P04083 346 aa21.05■□□□□ 0.96
LRRC28-217ENST00000560213 PTGER2P43116 358 aa21.04■□□□□ 0.96
LRRC28-217ENST00000560213 PROSER3Q2NL68 480 aa21.04■□□□□ 0.96
LRRC28-217ENST00000560213 VAMP4O75379 141 aa21.03■□□□□ 0.96
LRRC28-217ENST00000560213 FKBP8Q14318 412 aa21.03■□□□□ 0.96
LRRC28-217ENST00000560213 KIF6Q6ZMV9 814 aa21.03■□□□□ 0.96
LRRC28-217ENST00000560213 PPP1R1BQ9UD71 204 aaPredicted RBP21.03■□□□□ 0.96
LRRC28-217ENST00000560213 CAMTA2O94983 1202 aa21.02■□□□□ 0.96
LRRC28-217ENST00000560213 SGIP1Q9BQI5 828 aa21.02■□□□□ 0.96
LRRC28-217ENST00000560213 STK31Q9BXU1 1019 aa21.02■□□□□ 0.96
LRRC28-217ENST00000560213 HYPKQ9NX55 129 aa21.02■□□□□ 0.96
LRRC28-217ENST00000560213 ZBED9Q6R2W3 1325 aa21.02■□□□□ 0.95
LRRC28-217ENST00000560213 COL24A1Q17RW2 1714 aa21.01■□□□□ 0.95
LRRC28-217ENST00000560213 AIMP1Q12904 312 aaKnown RBP21.01■□□□□ 0.95
LRRC28-217ENST00000560213 TTLL7Q6ZT98 887 aa21.01■□□□□ 0.95
LRRC28-217ENST00000560213 COPS6Q7L5N1 327 aa21.01■□□□□ 0.95
LRRC28-217ENST00000560213 LRP10Q7Z4F1 713 aa21.01■□□□□ 0.95
LRRC28-217ENST00000560213 TRMT2AQ8IZ69 625 aaKnown RBP21.01■□□□□ 0.95
LRRC28-217ENST00000560213 BCL2L12Q9HB09 334 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms