RNA–Protein interactions for RNA: ENST00000559728.1

HMG20A-209, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 981 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-209ENST00000559728 IFT57Q9NWB7 429 aa11.84□□□□□ -0.51
HMG20A-209ENST00000559728 CCNL1Q9UK58 526 aaPredicted RBP11.84□□□□□ -0.51
HMG20A-209ENST00000559728 RREB1Q92766 1687 aa11.84□□□□□ -0.51
HMG20A-209ENST00000559728 IL16Q14005 1332 aa11.84□□□□□ -0.51
HMG20A-209ENST00000559728 DNAJC10Q8IXB1 793 aa11.83□□□□□ -0.52
HMG20A-209ENST00000559728 VSIG10Q8N0Z9 540 aa11.83□□□□□ -0.52
HMG20A-209ENST00000559728 TSPYL4Q9UJ04 414 aa11.83□□□□□ -0.52
HMG20A-209ENST00000559728 UBR2Q8IWV8 1755 aa11.82□□□□□ -0.52
HMG20A-209ENST00000559728 ATP6V1AP38606 617 aa11.82□□□□□ -0.52
HMG20A-209ENST00000559728 CICQ96RK0 1608 aaPredicted RBP11.82□□□□□ -0.52
HMG20A-209ENST00000559728 NUP188Q5SRE5 1749 aa11.81□□□□□ -0.52
HMG20A-209ENST00000559728 GIGYF1O75420 1035 aaPredicted RBP11.81□□□□□ -0.52
HMG20A-209ENST00000559728 CYP19A1P11511 503 aaPredicted RBP11.81□□□□□ -0.52
HMG20A-209ENST00000559728 INTS5Q6P9B9 1019 aaKnown RBP11.81□□□□□ -0.52
HMG20A-209ENST00000559728 TRMT2AQ8IZ69 625 aaKnown RBP11.81□□□□□ -0.52
HMG20A-209ENST00000559728 TTC5Q8N0Z6 440 aa11.81□□□□□ -0.52
HMG20A-209ENST00000559728 TSR2Q969E8 191 aaKnown RBP11.81□□□□□ -0.52
HMG20A-209ENST00000559728 CDCA7LQ96GN5 454 aa11.81□□□□□ -0.52
HMG20A-209ENST00000559728 FMNL2Q96PY5 1086 aa11.81□□□□□ -0.52
HMG20A-209ENST00000559728 USP16Q9Y5T5 823 aa11.81□□□□□ -0.52
HMG20A-209ENST00000559728 KDM3BQ7LBC6 1761 aa11.81□□□□□ -0.52
HMG20A-209ENST00000559728 ZNF831Q5JPB2 1677 aa11.81□□□□□ -0.52
HMG20A-209ENST00000559728 VASPP50552 380 aaPredicted RBP11.8□□□□□ -0.52
HMG20A-209ENST00000559728 GNAI1P63096 354 aa11.8□□□□□ -0.52
HMG20A-209ENST00000559728 CALD1Q05682 793 aaKnown RBP11.8□□□□□ -0.52
HMG20A-209ENST00000559728 SMIM5Q71RC9 77 aa11.8□□□□□ -0.52
HMG20A-209ENST00000559728 C8orf58Q8NAV2 365 aa11.8□□□□□ -0.52
HMG20A-209ENST00000559728 LAS1LQ9Y4W2 734 aaKnown RBP11.8□□□□□ -0.52
HMG20A-209ENST00000559728 VIRMAQ69YN4 1812 aaKnown RBP11.8□□□□□ -0.52
HMG20A-209ENST00000559728 FANCIQ9NVI1 1328 aa11.8□□□□□ -0.52
HMG20A-209ENST00000559728 TJP1Q07157 1748 aa11.8□□□□□ -0.52
HMG20A-209ENST00000559728 SNRPA1P09661 255 aaKnown RBP11.79□□□□□ -0.52
HMG20A-209ENST00000559728 HNRNPUQ00839 825 aaKnown RBP eCLIP11.79□□□□□ -0.52
HMG20A-209ENST00000559728 SLFN5Q08AF3 891 aa11.79□□□□□ -0.52
HMG20A-209ENST00000559728 PLCD3Q8N3E9 789 aa11.79□□□□□ -0.52
HMG20A-209ENST00000559728 TSPYL6Q8N831 410 aa11.79□□□□□ -0.52
HMG20A-209ENST00000559728 CNTNAP4Q9C0A0 1308 aa11.79□□□□□ -0.52
HMG20A-209ENST00000559728 C5P01031 1676 aa11.78□□□□□ -0.52
HMG20A-209ENST00000559728 CRKLP46109 303 aaKnown RBP11.78□□□□□ -0.52
HMG20A-209ENST00000559728 SLC15A2Q16348 729 aa11.78□□□□□ -0.52
HMG20A-209ENST00000559728 RC3H1Q5TC82 1133 aaKnown RBP11.78□□□□□ -0.52
HMG20A-209ENST00000559728 LRP10Q7Z4F1 713 aa11.78□□□□□ -0.52
HMG20A-209ENST00000559728 PDGFDQ9GZP0 370 aaPredicted RBP11.78□□□□□ -0.52
HMG20A-209ENST00000559728 NBPF26B4DH59 902 aa11.77□□□□□ -0.53
HMG20A-209ENST00000559728 A1BGP04217 495 aa11.77□□□□□ -0.53
HMG20A-209ENST00000559728 GOLGA2Q08379 1002 aa11.77□□□□□ -0.53
HMG20A-209ENST00000559728 PDIA6Q15084 440 aa11.77□□□□□ -0.53
HMG20A-209ENST00000559728 NBPF14Q5TI25 921 aa11.77□□□□□ -0.53
HMG20A-209ENST00000559728 NBPF10Q6P3W6 841 aaKnown RBP11.77□□□□□ -0.53
HMG20A-209ENST00000559728 NBPF15Q8N660 670 aa11.77□□□□□ -0.53
HMG20A-209ENST00000559728 ZBTB1Q9Y2K1 713 aa11.77□□□□□ -0.53
HMG20A-209ENST00000559728 PNPLA7Q6ZV29 1317 aa11.77□□□□□ -0.53
HMG20A-209ENST00000559728 DUSP27Q5VZP5 1158 aa11.76□□□□□ -0.53
HMG20A-209ENST00000559728 C4BP0C0L5 1744 aa11.76□□□□□ -0.53
HMG20A-209ENST00000559728 COL5A3P25940 1745 aaPredicted RBP11.76□□□□□ -0.53
HMG20A-209ENST00000559728 ZBED9Q6R2W3 1325 aa11.76□□□□□ -0.53
HMG20A-209ENST00000559728 E9PSI1 815 aa11.75□□□□□ -0.53
HMG20A-209ENST00000559728 RPS6KA4O75676 772 aa11.75□□□□□ -0.53
HMG20A-209ENST00000559728 HOXB7P09629 217 aa11.75□□□□□ -0.53
HMG20A-209ENST00000559728 PIP4K2AP48426 406 aaPredicted RBP11.75□□□□□ -0.53
HMG20A-209ENST00000559728 EXOSC9Q06265 439 aaKnown RBP11.75□□□□□ -0.53
HMG20A-209ENST00000559728 R3HDM1Q15032 1099 aaKnown RBP11.75□□□□□ -0.53
HMG20A-209ENST00000559728 CHADLQ6NUI6 762 aa11.75□□□□□ -0.53
HMG20A-209ENST00000559728 TEX13AQ9BXU3 409 aaPredicted RBP11.75□□□□□ -0.53
HMG20A-209ENST00000559728 CCDC87Q9NVE4 849 aa11.75□□□□□ -0.53
HMG20A-209ENST00000559728 STK32BQ9NY57 414 aa11.75□□□□□ -0.53
HMG20A-209ENST00000559728 SOS1Q07889 1333 aaPredicted RBP11.75□□□□□ -0.53
HMG20A-209ENST00000559728 KAT6BQ8WYB5 2073 aa11.75□□□□□ -0.53
HMG20A-209ENST00000559728 PSDA5PKW4 1024 aaPredicted RBP11.74□□□□□ -0.53
HMG20A-209ENST00000559728 ELL2O00472 640 aaPredicted RBP11.74□□□□□ -0.53
HMG20A-209ENST00000559728 VAMP4O75379 141 aa11.74□□□□□ -0.53
HMG20A-209ENST00000559728 EIF5P55010 431 aaKnown RBP11.74□□□□□ -0.53
HMG20A-209ENST00000559728 PROSER3Q2NL68 480 aa11.74□□□□□ -0.53
HMG20A-209ENST00000559728 COL23A1Q86Y22 540 aaPredicted RBP11.74□□□□□ -0.53
HMG20A-209ENST00000559728 MYH16Q9H6N6 1097 aa11.74□□□□□ -0.53
HMG20A-209ENST00000559728 TAF1LQ8IZX4 1826 aa11.74□□□□□ -0.53
HMG20A-209ENST00000559728 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.73□□□□□ -0.53
HMG20A-209ENST00000559728 GNPATO15228 680 aa11.73□□□□□ -0.53
HMG20A-209ENST00000559728 STARD3NLO95772 234 aa11.73□□□□□ -0.53
HMG20A-209ENST00000559728 AK7Q96M32 723 aa11.73□□□□□ -0.53
HMG20A-209ENST00000559728 TFCP2L1Q9NZI6 479 aa11.73□□□□□ -0.53
HMG20A-209ENST00000559728 MYH14Q7Z406 1995 aaKnown RBP11.72□□□□□ -0.53
HMG20A-209ENST00000559728 ANXA1P04083 346 aa11.72□□□□□ -0.53
HMG20A-209ENST00000559728 CANXP27824 592 aaKnown RBP11.72□□□□□ -0.53
HMG20A-209ENST00000559728 SSFA2P28290 1259 aa11.72□□□□□ -0.53
HMG20A-209ENST00000559728 IL6STP40189 918 aaPredicted RBP11.72□□□□□ -0.53
HMG20A-209ENST00000559728 PIP4P2Q8N4L2 257 aa11.72□□□□□ -0.53
HMG20A-209ENST00000559728 ARHGEF1Q92888 912 aaKnown RBP11.72□□□□□ -0.53
HMG20A-209ENST00000559728 ERBB4Q15303 1308 aa11.71□□□□□ -0.53
HMG20A-209ENST00000559728 PHF14O94880 888 aa11.71□□□□□ -0.53
HMG20A-209ENST00000559728 EIF2S2P20042 333 aaKnown RBP11.71□□□□□ -0.53
HMG20A-209ENST00000559728 TWISTNBQ3B726 338 aaPredicted RBP11.71□□□□□ -0.53
HMG20A-209ENST00000559728 HDGFL1Q5TGJ6 251 aa11.71□□□□□ -0.53
HMG20A-209ENST00000559728 NECTIN2Q92692 538 aa11.71□□□□□ -0.53
HMG20A-209ENST00000559728 RTCBQ9Y3I0 505 aaKnown RBP11.71□□□□□ -0.53
HMG20A-209ENST00000559728 COL15A1P39059 1388 aa11.7□□□□□ -0.54
HMG20A-209ENST00000559728 PRKAR2AP13861 404 aaKnown RBP11.7□□□□□ -0.54
HMG20A-209ENST00000559728 BCL2L12Q9HB09 334 aa11.7□□□□□ -0.54
HMG20A-209ENST00000559728 CHPF2Q9P2E5 772 aa11.7□□□□□ -0.54
HMG20A-209ENST00000559728 USP42Q9H9J4 1324 aaKnown RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms