RNA–Protein interactions for RNA: ENST00000559378.4

HMGN2P47-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 47, humanhuman

BASIC

Gene HMGN2P47, Length 272 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P47-201ENST00000559378 C7P10643 843 aa7.11□□□□□ -1.27
HMGN2P47-201ENST00000559378 SPDYE2Q495Y8 402 aa7.11□□□□□ -1.27
HMGN2P47-201ENST00000559378 LRCH2Q5VUJ6 765 aa7.11□□□□□ -1.27
HMGN2P47-201ENST00000559378 PMFBP1Q8TBY8 1022 aa7.11□□□□□ -1.27
HMGN2P47-201ENST00000559378 ATRIPQ8WXE1 791 aa7.11□□□□□ -1.27
HMGN2P47-201ENST00000559378 TEKT1Q969V4 418 aa7.11□□□□□ -1.27
HMGN2P47-201ENST00000559378 CD248Q9HCU0 757 aa7.11□□□□□ -1.27
HMGN2P47-201ENST00000559378 BRMS1Q9HCU9 246 aa7.11□□□□□ -1.27
HMGN2P47-201ENST00000559378 DDX49Q9Y6V7 483 aaKnown RBP7.11□□□□□ -1.27
HMGN2P47-201ENST00000559378 CCDC163A0A0D9SF12 145 aa7.1□□□□□ -1.27
HMGN2P47-201ENST00000559378 ANKRD18BA2A2Z9 1011 aa7.1□□□□□ -1.27
HMGN2P47-201ENST00000559378 TBX3O15119 743 aa7.1□□□□□ -1.27
HMGN2P47-201ENST00000559378 DNAJC6O75061 913 aa7.1□□□□□ -1.27
HMGN2P47-201ENST00000559378 PIK3CAP42336 1068 aa7.1□□□□□ -1.27
HMGN2P47-201ENST00000559378 TRAPPC10P48553 1259 aa7.1□□□□□ -1.27
HMGN2P47-201ENST00000559378 RAPGEF1Q13905 1077 aa7.1□□□□□ -1.27
HMGN2P47-201ENST00000559378 SIM2Q14190 667 aaPredicted RBP7.1□□□□□ -1.27
HMGN2P47-201ENST00000559378 TAF11Q15544 211 aa7.1□□□□□ -1.27
HMGN2P47-201ENST00000559378 C9orf131Q5VYM1 1079 aa7.1□□□□□ -1.27
HMGN2P47-201ENST00000559378 PDXDC1Q6P996 788 aa7.1□□□□□ -1.27
HMGN2P47-201ENST00000559378 MIER1Q8N108 512 aa7.1□□□□□ -1.27
HMGN2P47-201ENST00000559378 MICALL1Q8N3F8 863 aa7.1□□□□□ -1.27
HMGN2P47-201ENST00000559378 C17orf50Q8WW18 174 aa7.1□□□□□ -1.27
HMGN2P47-201ENST00000559378 ARMC5Q96C12 935 aa7.1□□□□□ -1.27
HMGN2P47-201ENST00000559378 APBA2Q99767 749 aa7.1□□□□□ -1.27
HMGN2P47-201ENST00000559378 RMI1Q9H9A7 625 aa7.1□□□□□ -1.27
HMGN2P47-201ENST00000559378 AS3MTQ9HBK9 375 aa7.1□□□□□ -1.27
HMGN2P47-201ENST00000559378 USP25Q9UHP3 1055 aa7.1□□□□□ -1.27
HMGN2P47-201ENST00000559378 TTF2Q9UNY4 1162 aaKnown RBP7.1□□□□□ -1.27
HMGN2P47-201ENST00000559378 SARNPP82979 210 aaKnown RBP7.09□□□□□ -1.27
HMGN2P47-201ENST00000559378 TRIM29Q14134 588 aa7.09□□□□□ -1.27
HMGN2P47-201ENST00000559378 NUTM2GQ5VZR2 741 aa7.09□□□□□ -1.27
HMGN2P47-201ENST00000559378 B4GALNT3Q6L9W6 998 aa7.09□□□□□ -1.27
HMGN2P47-201ENST00000559378 TAX1BP1Q86VP1 789 aa7.09□□□□□ -1.27
HMGN2P47-201ENST00000559378 SUGP1Q8IWZ8 645 aaKnown RBP7.09□□□□□ -1.27
HMGN2P47-201ENST00000559378 TEX19Q8NA77 164 aa7.09□□□□□ -1.27
HMGN2P47-201ENST00000559378 PHC3Q8NDX5 983 aa7.09□□□□□ -1.27
HMGN2P47-201ENST00000559378 GIMAP1Q8WWP7 306 aa7.09□□□□□ -1.27
HMGN2P47-201ENST00000559378 TAF4BQ92750 862 aa7.09□□□□□ -1.27
HMGN2P47-201ENST00000559378 VMP1Q96GC9 406 aa7.09□□□□□ -1.27
HMGN2P47-201ENST00000559378 MAP3K14Q99558 947 aa7.09□□□□□ -1.27
HMGN2P47-201ENST00000559378 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.09□□□□□ -1.27
HMGN2P47-201ENST00000559378 PDGFDQ9GZP0 370 aaPredicted RBP7.09□□□□□ -1.27
HMGN2P47-201ENST00000559378 DHX36Q9H2U1 1008 aaKnown RBP7.09□□□□□ -1.27
HMGN2P47-201ENST00000559378 RWDD1Q9H446 243 aaPredicted RBP7.09□□□□□ -1.27
HMGN2P47-201ENST00000559378 TSPY26PQ9H489 355 aa7.09□□□□□ -1.27
HMGN2P47-201ENST00000559378 HOXC10Q9NYD6 342 aa7.09□□□□□ -1.27
HMGN2P47-201ENST00000559378 CLIC5Q9NZA1 410 aa7.09□□□□□ -1.27
HMGN2P47-201ENST00000559378 IP6K2Q9UHH9 426 aa7.09□□□□□ -1.27
HMGN2P47-201ENST00000559378 GJA3Q9Y6H8 435 aa7.09□□□□□ -1.27
HMGN2P47-201ENST00000559378 EIF4G1Q04637 1599 aaKnown RBP7.08□□□□□ -1.28
HMGN2P47-201ENST00000559378 ANKRD33BA6NCL7 494 aa7.08□□□□□ -1.28
HMGN2P47-201ENST00000559378 A6NJY4 79 aa7.08□□□□□ -1.28
HMGN2P47-201ENST00000559378 POM121CA8CG34 1229 aa7.08□□□□□ -1.28
HMGN2P47-201ENST00000559378 TMEM110-MUSTN1A8MSY1 372 aa7.08□□□□□ -1.28
HMGN2P47-201ENST00000559378 RPN1P04843 607 aaKnown RBP7.08□□□□□ -1.28
HMGN2P47-201ENST00000559378 HNRNPCP07910 306 aaKnown RBP eCLIP7.08□□□□□ -1.28
HMGN2P47-201ENST00000559378 ZSCAN20P17040 1043 aaPredicted RBP7.08□□□□□ -1.28
HMGN2P47-201ENST00000559378 STIP1P31948 543 aaKnown RBP7.08□□□□□ -1.28
HMGN2P47-201ENST00000559378 GNALP38405 381 aa7.08□□□□□ -1.28
HMGN2P47-201ENST00000559378 CASP2P42575 452 aa7.08□□□□□ -1.28
HMGN2P47-201ENST00000559378 CCDC15Q0P6D6 951 aa7.08□□□□□ -1.28
HMGN2P47-201ENST00000559378 PTK7Q13308 1070 aa7.08□□□□□ -1.28
HMGN2P47-201ENST00000559378 ODR4Q5SWX8 454 aa7.08□□□□□ -1.28
HMGN2P47-201ENST00000559378 CFAP70Q5T0N1 1121 aa7.08□□□□□ -1.28
HMGN2P47-201ENST00000559378 WAPLQ7Z5K2 1190 aa7.08□□□□□ -1.28
HMGN2P47-201ENST00000559378 PLPP6Q8IY26 295 aa7.08□□□□□ -1.28
HMGN2P47-201ENST00000559378 SAMD14Q8IZD0 417 aaPredicted RBP7.08□□□□□ -1.28
HMGN2P47-201ENST00000559378 CLASRPQ8N2M8 674 aaKnown RBP7.08□□□□□ -1.28
HMGN2P47-201ENST00000559378 PRPF38AQ8NAV1 312 aaKnown RBP7.08□□□□□ -1.28
HMGN2P47-201ENST00000559378 HELQQ8TDG4 1101 aa7.08□□□□□ -1.28
HMGN2P47-201ENST00000559378 TSC1Q92574 1164 aa7.08□□□□□ -1.28
HMGN2P47-201ENST00000559378 RELTQ969Z4 430 aa7.08□□□□□ -1.28
HMGN2P47-201ENST00000559378 COMMD8Q9NX08 183 aa7.08□□□□□ -1.28
HMGN2P47-201ENST00000559378 HDAC9Q9UKV0 1011 aa7.08□□□□□ -1.28
HMGN2P47-201ENST00000559378 ZNF232Q9UNY5 417 aa7.08□□□□□ -1.28
HMGN2P47-201ENST00000559378 CCDC196A0A1B0GTZ2 297 aa7.07□□□□□ -1.28
HMGN2P47-201ENST00000559378 A0A1W2PRQ8 180 aa7.07□□□□□ -1.28
HMGN2P47-201ENST00000559378 KIF3BO15066 747 aa7.07□□□□□ -1.28
HMGN2P47-201ENST00000559378 PPFIA2O75334 1257 aa7.07□□□□□ -1.28
HMGN2P47-201ENST00000559378 CAPN2P17655 700 aa7.07□□□□□ -1.28
HMGN2P47-201ENST00000559378 MKRN4PQ13434 485 aaPredicted RBP7.07□□□□□ -1.28
HMGN2P47-201ENST00000559378 AMHR2Q16671 573 aa7.07□□□□□ -1.28
HMGN2P47-201ENST00000559378 DNAJC21Q5F1R6 531 aaKnown RBP7.07□□□□□ -1.28
HMGN2P47-201ENST00000559378 CCDC158Q5M9N0 1113 aa7.07□□□□□ -1.28
HMGN2P47-201ENST00000559378 SYCP2LQ5T4T6 812 aa7.07□□□□□ -1.28
HMGN2P47-201ENST00000559378 BRSK2Q8IWQ3 736 aa7.07□□□□□ -1.28
HMGN2P47-201ENST00000559378 ELOA2Q8IYF1 753 aaPredicted RBP7.07□□□□□ -1.28
HMGN2P47-201ENST00000559378 STAG2Q8N3U4 1231 aa7.07□□□□□ -1.28
HMGN2P47-201ENST00000559378 ARL6IP6Q8N6S5 226 aa7.07□□□□□ -1.28
HMGN2P47-201ENST00000559378 SLC43A3Q8NBI5 491 aa7.07□□□□□ -1.28
HMGN2P47-201ENST00000559378 CDK5RAP3Q96JB5 506 aa7.07□□□□□ -1.28
HMGN2P47-201ENST00000559378 RNPC3Q96LT9 517 aaKnown RBP7.07□□□□□ -1.28
HMGN2P47-201ENST00000559378 RMDN2Q96LZ7 410 aa7.07□□□□□ -1.28
HMGN2P47-201ENST00000559378 TINF2Q9BSI4 451 aa7.07□□□□□ -1.28
HMGN2P47-201ENST00000559378 TRIM6Q9C030 488 aaPredicted RBP7.07□□□□□ -1.28
HMGN2P47-201ENST00000559378 MRPL42Q9Y6G3 142 aaKnown RBP7.07□□□□□ -1.28
HMGN2P47-201ENST00000559378 SHTN1A0MZ66 631 aa7.06□□□□□ -1.28
HMGN2P47-201ENST00000559378 GRXCR2A6NFK2 248 aa7.06□□□□□ -1.28
HMGN2P47-201ENST00000559378 MSL3P1P0C860 447 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms