RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 ARHGEF1Q92888 912 aaKnown RBP24.57■■□□□ 1.52
CASC4-209ENST00000559222 USP16Q9Y5T5 823 aa24.57■■□□□ 1.52
CASC4-209ENST00000559222 SOS1Q07889 1333 aaPredicted RBP24.57■■□□□ 1.52
CASC4-209ENST00000559222 PIP4K2AP48426 406 aaPredicted RBP24.56■■□□□ 1.52
CASC4-209ENST00000559222 EIF4A1P60842 406 aaKnown RBP24.56■■□□□ 1.52
CASC4-209ENST00000559222 DIEXFQ68CQ4 756 aaKnown RBP24.56■■□□□ 1.52
CASC4-209ENST00000559222 FLAD1Q8NFF5 587 aa24.56■■□□□ 1.52
CASC4-209ENST00000559222 SLC16A10Q8TF71 515 aa24.56■■□□□ 1.52
CASC4-209ENST00000559222 SRP68Q9UHB9 627 aaKnown RBP24.55■■□□□ 1.52
CASC4-209ENST00000559222 TSPYL4Q9UJ04 414 aa24.55■■□□□ 1.52
CASC4-209ENST00000559222 A1BGP04217 495 aa24.54■■□□□ 1.52
CASC4-209ENST00000559222 HMGB2P26583 209 aaKnown RBP24.54■■□□□ 1.52
CASC4-209ENST00000559222 CANXP27824 592 aaKnown RBP24.54■■□□□ 1.52
CASC4-209ENST00000559222 TRAPPC3LQ5T215 181 aa24.53■■□□□ 1.52
CASC4-209ENST00000559222 LAS1LQ9Y4W2 734 aaKnown RBP24.53■■□□□ 1.52
CASC4-209ENST00000559222 COL15A1P39059 1388 aa24.53■■□□□ 1.52
CASC4-209ENST00000559222 SNRPA1P09661 255 aaKnown RBP24.52■■□□□ 1.52
CASC4-209ENST00000559222 KRT24Q2M2I5 525 aa24.52■■□□□ 1.52
CASC4-209ENST00000559222 SCN7AQ01118 1682 aa24.52■■□□□ 1.52
CASC4-209ENST00000559222 STARD3NLO95772 234 aa24.51■■□□□ 1.51
CASC4-209ENST00000559222 BCORQ6W2J9 1755 aa24.5■■□□□ 1.51
CASC4-209ENST00000559222 CHL1O00533 1208 aa24.5■■□□□ 1.51
CASC4-209ENST00000559222 ADRA2BP18089 450 aa24.5■■□□□ 1.51
CASC4-209ENST00000559222 MIER1Q8N108 512 aa24.5■■□□□ 1.51
CASC4-209ENST00000559222 PPP1R1BQ9UD71 204 aaPredicted RBP24.5■■□□□ 1.51
CASC4-209ENST00000559222 SALL2Q9Y467 1007 aaPredicted RBP24.5■■□□□ 1.51
CASC4-209ENST00000559222 GIGYF1O75420 1035 aaPredicted RBP24.49■■□□□ 1.51
CASC4-209ENST00000559222 TEX13AQ9BXU3 409 aaPredicted RBP24.49■■□□□ 1.51
CASC4-209ENST00000559222 USP42Q9H9J4 1324 aaKnown RBP24.49■■□□□ 1.51
CASC4-209ENST00000559222 NBPF26B4DH59 902 aa24.48■■□□□ 1.51
CASC4-209ENST00000559222 GYS1P13807 737 aa24.48■■□□□ 1.51
CASC4-209ENST00000559222 RFC4P35249 363 aa24.48■■□□□ 1.51
CASC4-209ENST00000559222 NBPF10Q6P3W6 841 aaKnown RBP24.48■■□□□ 1.51
CASC4-209ENST00000559222 NBPF15Q8N660 670 aa24.48■■□□□ 1.51
CASC4-209ENST00000559222 ZNF853P0CG23 659 aa24.47■■□□□ 1.51
CASC4-209ENST00000559222 EIF5P55010 431 aaKnown RBP24.47■■□□□ 1.51
CASC4-209ENST00000559222 ARXQ96QS3 562 aa24.47■■□□□ 1.51
CASC4-209ENST00000559222 ZNF330Q9Y3S2 320 aaPredicted RBP24.47■■□□□ 1.51
CASC4-209ENST00000559222 CCER2I3L3R5 266 aa24.46■■□□□ 1.51
CASC4-209ENST00000559222 MBIPQ9NS73 344 aa24.46■■□□□ 1.51
CASC4-209ENST00000559222 POLD1P28340 1107 aa24.45■■□□□ 1.5
CASC4-209ENST00000559222 USPL1Q5W0Q7 1092 aa24.45■■□□□ 1.5
CASC4-209ENST00000559222 WWC1Q8IX03 1113 aa24.45■■□□□ 1.5
CASC4-209ENST00000559222 CFAP44Q96MT7 982 aa24.45■■□□□ 1.5
CASC4-209ENST00000559222 FHDC1Q9C0D6 1143 aaPredicted RBP24.45■■□□□ 1.5
CASC4-209ENST00000559222 BABAM1Q9NWV8 329 aa24.45■■□□□ 1.5
CASC4-209ENST00000559222 FKBP8Q14318 412 aa24.44■■□□□ 1.5
CASC4-209ENST00000559222 BCL2L12Q9HB09 334 aa24.44■■□□□ 1.5
CASC4-209ENST00000559222 CCDC27Q2M243 656 aa24.43■■□□□ 1.5
CASC4-209ENST00000559222 MMP10P09238 476 aa24.42■■□□□ 1.5
CASC4-209ENST00000559222 IL6STP40189 918 aaPredicted RBP24.42■■□□□ 1.5
CASC4-209ENST00000559222 IFT57Q9NWB7 429 aa24.42■■□□□ 1.5
CASC4-209ENST00000559222 TBC1D2BQ9UPU7 963 aa24.42■■□□□ 1.5
CASC4-209ENST00000559222 AFDNP55196 1824 aaKnown RBP24.42■■□□□ 1.5
CASC4-209ENST00000559222 KLHL34Q8N239 644 aa24.41■■□□□ 1.5
CASC4-209ENST00000559222 NARFQ9UHQ1 456 aa24.41■■□□□ 1.5
CASC4-209ENST00000559222 NECTIN2Q92692 538 aa24.4■■□□□ 1.5
CASC4-209ENST00000559222 TSR2Q969E8 191 aaKnown RBP24.4■■□□□ 1.5
CASC4-209ENST00000559222 KIAA1551Q9HCM1 1747 aa24.4■■□□□ 1.5
CASC4-209ENST00000559222 EIF2S2P20042 333 aaKnown RBP24.39■■□□□ 1.49
CASC4-209ENST00000559222 DDR1Q08345 913 aa24.39■■□□□ 1.49
CASC4-209ENST00000559222 KIF13BQ9NQT8 1826 aa24.39■■□□□ 1.49
CASC4-209ENST00000559222 ZPR1O75312 459 aa24.38■■□□□ 1.49
CASC4-209ENST00000559222 ANXA1P04083 346 aa24.38■■□□□ 1.49
CASC4-209ENST00000559222 GNAI1P63096 354 aa24.38■■□□□ 1.49
CASC4-209ENST00000559222 PROSER3Q2NL68 480 aa24.38■■□□□ 1.49
CASC4-209ENST00000559222 SYT17Q9BSW7 474 aa24.38■■□□□ 1.49
CASC4-209ENST00000559222 CAMTA2O94983 1202 aa24.37■■□□□ 1.49
CASC4-209ENST00000559222 NLGN1Q8N2Q7 840 aa24.37■■□□□ 1.49
CASC4-209ENST00000559222 NLGN2Q8NFZ4 835 aa24.37■■□□□ 1.49
CASC4-209ENST00000559222 NRXN2Q9P2S2 1712 aa24.36■■□□□ 1.49
CASC4-209ENST00000559222 MYL6BP14649 208 aa24.36■■□□□ 1.49
CASC4-209ENST00000559222 CALD1Q05682 793 aaKnown RBP24.36■■□□□ 1.49
CASC4-209ENST00000559222 PDIA6Q15084 440 aa24.36■■□□□ 1.49
CASC4-209ENST00000559222 DZIP3Q86Y13 1208 aaKnown RBP24.36■■□□□ 1.49
CASC4-209ENST00000559222 NGEFQ8N5V2 710 aa24.36■■□□□ 1.49
CASC4-209ENST00000559222 SPINK5Q9NQ38 1064 aaPredicted RBP24.36■■□□□ 1.49
CASC4-209ENST00000559222 NCBP3Q53F19 620 aaKnown RBP24.35■■□□□ 1.49
CASC4-209ENST00000559222 LRP10Q7Z4F1 713 aa24.35■■□□□ 1.49
CASC4-209ENST00000559222 C8orf58Q8NAV2 365 aa24.35■■□□□ 1.49
CASC4-209ENST00000559222 NUP98P52948 1817 aa24.35■■□□□ 1.49
CASC4-209ENST00000559222 N4BP2Q86UW6 1770 aaPredicted RBP24.34■■□□□ 1.49
CASC4-209ENST00000559222 A0A087WZG4 1122 aa24.34■■□□□ 1.49
CASC4-209ENST00000559222 ELL2O00472 640 aaPredicted RBP24.34■■□□□ 1.49
CASC4-209ENST00000559222 NFIXQ14938 502 aa24.34■■□□□ 1.49
CASC4-209ENST00000559222 DUSP27Q5VZP5 1158 aa24.34■■□□□ 1.49
CASC4-209ENST00000559222 TM4SF1P30408 202 aa24.33■■□□□ 1.49
CASC4-209ENST00000559222 TBC1D9BQ66K14 1250 aa24.33■■□□□ 1.49
CASC4-209ENST00000559222 TTLL7Q6ZT98 887 aa24.33■■□□□ 1.49
CASC4-209ENST00000559222 TSPYL6Q8N831 410 aa24.33■■□□□ 1.49
CASC4-209ENST00000559222 C10orf71Q711Q0 1435 aa24.33■■□□□ 1.49
CASC4-209ENST00000559222 ZNF521Q96K83 1311 aa24.33■■□□□ 1.48
CASC4-209ENST00000559222 POLRMTO00411 1230 aaKnown RBP24.32■■□□□ 1.48
CASC4-209ENST00000559222 BICDL1Q6ZP65 573 aa24.32■■□□□ 1.48
CASC4-209ENST00000559222 IL16Q14005 1332 aa24.32■■□□□ 1.48
CASC4-209ENST00000559222 FANCIQ9NVI1 1328 aa24.31■■□□□ 1.48
CASC4-209ENST00000559222 HLFQ16534 295 aa24.3■■□□□ 1.48
CASC4-209ENST00000559222 HDGFL1Q5TGJ6 251 aa24.3■■□□□ 1.48
CASC4-209ENST00000559222 CHPF2Q9P2E5 772 aa24.3■■□□□ 1.48
CASC4-209ENST00000559222 PARP3Q9Y6F1 533 aa24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms