RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 HEG1Q9ULI3 1381 aa18.2■□□□□ 0.5
TSPAN3-205ENST00000558745 COL5A3P25940 1745 aaPredicted RBP18.2■□□□□ 0.5
TSPAN3-205ENST00000558745 CANXP27824 592 aaKnown RBP18.2■□□□□ 0.5
TSPAN3-205ENST00000558745 CCDC87Q9NVE4 849 aa18.2■□□□□ 0.5
TSPAN3-205ENST00000558745 ZBTB1Q9Y2K1 713 aa18.2■□□□□ 0.5
TSPAN3-205ENST00000558745 ZNF831Q5JPB2 1677 aa18.19■□□□□ 0.5
TSPAN3-205ENST00000558745 UBR2Q8IWV8 1755 aa18.19■□□□□ 0.5
TSPAN3-205ENST00000558745 A1BGP04217 495 aa18.18■□□□□ 0.5
TSPAN3-205ENST00000558745 PIP4K2AP48426 406 aaPredicted RBP18.18■□□□□ 0.5
TSPAN3-205ENST00000558745 FAM9BQ8IZU0 186 aa18.18■□□□□ 0.5
TSPAN3-205ENST00000558745 SRP68Q9UHB9 627 aaKnown RBP18.18■□□□□ 0.5
TSPAN3-205ENST00000558745 ARXQ96QS3 562 aa18.17■□□□□ 0.5
TSPAN3-205ENST00000558745 LAS1LQ9Y4W2 734 aaKnown RBP18.17■□□□□ 0.5
TSPAN3-205ENST00000558745 STARD3NLO95772 234 aa18.16■□□□□ 0.5
TSPAN3-205ENST00000558745 RFC4P35249 363 aa18.16■□□□□ 0.5
TSPAN3-205ENST00000558745 CHD4Q14839 1912 aa18.16■□□□□ 0.5
TSPAN3-205ENST00000558745 SNRPA1P09661 255 aaKnown RBP18.15■□□□□ 0.5
TSPAN3-205ENST00000558745 POLD1P28340 1107 aa18.15■□□□□ 0.5
TSPAN3-205ENST00000558745 EIF4A1P60842 406 aaKnown RBP18.15■□□□□ 0.5
TSPAN3-205ENST00000558745 LMOD3Q0VAK6 560 aa18.15■□□□□ 0.5
TSPAN3-205ENST00000558745 KLHL34Q8N239 644 aa18.15■□□□□ 0.5
TSPAN3-205ENST00000558745 TSPYL4Q9UJ04 414 aa18.15■□□□□ 0.5
TSPAN3-205ENST00000558745 SOS1Q07889 1333 aaPredicted RBP18.14■□□□□ 0.49
TSPAN3-205ENST00000558745 TEX13AQ9BXU3 409 aaPredicted RBP18.14■□□□□ 0.49
TSPAN3-205ENST00000558745 FHDC1Q9C0D6 1143 aaPredicted RBP18.14■□□□□ 0.49
TSPAN3-205ENST00000558745 ZNF330Q9Y3S2 320 aaPredicted RBP18.14■□□□□ 0.49
TSPAN3-205ENST00000558745 SALL2Q9Y467 1007 aaPredicted RBP18.14■□□□□ 0.49
TSPAN3-205ENST00000558745 GYS1P13807 737 aa18.13■□□□□ 0.49
TSPAN3-205ENST00000558745 ADRA2BP18089 450 aa18.13■□□□□ 0.49
TSPAN3-205ENST00000558745 CICQ96RK0 1608 aaPredicted RBP18.12■□□□□ 0.49
TSPAN3-205ENST00000558745 USPL1Q5W0Q7 1092 aa18.12■□□□□ 0.49
TSPAN3-205ENST00000558745 SYT17Q9BSW7 474 aa18.12■□□□□ 0.49
TSPAN3-205ENST00000558745 CHL1O00533 1208 aa18.11■□□□□ 0.49
TSPAN3-205ENST00000558745 GIGYF1O75420 1035 aaPredicted RBP18.11■□□□□ 0.49
TSPAN3-205ENST00000558745 EIF5P55010 431 aaKnown RBP18.11■□□□□ 0.49
TSPAN3-205ENST00000558745 FKBP8Q14318 412 aa18.11■□□□□ 0.49
TSPAN3-205ENST00000558745 KRT24Q2M2I5 525 aa18.11■□□□□ 0.49
TSPAN3-205ENST00000558745 KDM3BQ7LBC6 1761 aa18.1■□□□□ 0.49
TSPAN3-205ENST00000558745 NBPF26B4DH59 902 aa18.1■□□□□ 0.49
TSPAN3-205ENST00000558745 MMP10P09238 476 aa18.1■□□□□ 0.49
TSPAN3-205ENST00000558745 NBPF10Q6P3W6 841 aaKnown RBP18.1■□□□□ 0.49
TSPAN3-205ENST00000558745 NBPF15Q8N660 670 aa18.1■□□□□ 0.49
TSPAN3-205ENST00000558745 TBC1D2BQ9UPU7 963 aa18.1■□□□□ 0.49
TSPAN3-205ENST00000558745 USP42Q9H9J4 1324 aaKnown RBP18.09■□□□□ 0.49
TSPAN3-205ENST00000558745 DIEXFQ68CQ4 756 aaKnown RBP18.09■□□□□ 0.49
TSPAN3-205ENST00000558745 BCL2L12Q9HB09 334 aa18.09■□□□□ 0.49
TSPAN3-205ENST00000558745 COL24A1Q17RW2 1714 aa18.09■□□□□ 0.49
TSPAN3-205ENST00000558745 COL15A1P39059 1388 aa18.09■□□□□ 0.49
TSPAN3-205ENST00000558745 ZPR1O75312 459 aa18.08■□□□□ 0.49
TSPAN3-205ENST00000558745 NLGN1Q8N2Q7 840 aa18.08■□□□□ 0.49
TSPAN3-205ENST00000558745 NARFQ9UHQ1 456 aa18.08■□□□□ 0.49
TSPAN3-205ENST00000558745 C4AP0C0L4 1744 aa18.07■□□□□ 0.48
TSPAN3-205ENST00000558745 CEP350Q5VT06 3117 aa18.07■□□□□ 0.48
TSPAN3-205ENST00000558745 EIF2S2P20042 333 aaKnown RBP18.07■□□□□ 0.48
TSPAN3-205ENST00000558745 IL6STP40189 918 aaPredicted RBP18.07■□□□□ 0.48
TSPAN3-205ENST00000558745 NGEFQ8N5V2 710 aa18.07■□□□□ 0.48
TSPAN3-205ENST00000558745 NLGN2Q8NFZ4 835 aa18.07■□□□□ 0.48
TSPAN3-205ENST00000558745 NECTIN2Q92692 538 aa18.07■□□□□ 0.48
TSPAN3-205ENST00000558745 ZNF853P0CG23 659 aa18.06■□□□□ 0.48
TSPAN3-205ENST00000558745 CFAP44Q96MT7 982 aa18.06■□□□□ 0.48
TSPAN3-205ENST00000558745 MBIPQ9NS73 344 aa18.06■□□□□ 0.48
TSPAN3-205ENST00000558745 BABAM1Q9NWV8 329 aa18.06■□□□□ 0.48
TSPAN3-205ENST00000558745 WWC1Q8IX03 1113 aa18.05■□□□□ 0.48
TSPAN3-205ENST00000558745 MIER1Q8N108 512 aa18.05■□□□□ 0.48
TSPAN3-205ENST00000558745 A0A087WZG4 1122 aa18.04■□□□□ 0.48
TSPAN3-205ENST00000558745 MYL6BP14649 208 aa18.04■□□□□ 0.48
TSPAN3-205ENST00000558745 DDR1Q08345 913 aa18.04■□□□□ 0.48
TSPAN3-205ENST00000558745 BICDL1Q6ZP65 573 aa18.04■□□□□ 0.48
TSPAN3-205ENST00000558745 ANXA1P04083 346 aa18.03■□□□□ 0.48
TSPAN3-205ENST00000558745 TM4SF1P30408 202 aa18.03■□□□□ 0.48
TSPAN3-205ENST00000558745 DZIP3Q86Y13 1208 aaKnown RBP18.03■□□□□ 0.48
TSPAN3-205ENST00000558745 ELL2O00472 640 aaPredicted RBP18.02■□□□□ 0.48
TSPAN3-205ENST00000558745 NFIXQ14938 502 aa18.02■□□□□ 0.48
TSPAN3-205ENST00000558745 IFT57Q9NWB7 429 aa18.02■□□□□ 0.48
TSPAN3-205ENST00000558745 WWC3Q9ULE0 1092 aa18.02■□□□□ 0.48
TSPAN3-205ENST00000558745 PARP3Q9Y6F1 533 aa18.02■□□□□ 0.48
TSPAN3-205ENST00000558745 CAMTA2O94983 1202 aa18.01■□□□□ 0.47
TSPAN3-205ENST00000558745 GNAI1P63096 354 aa18.01■□□□□ 0.47
TSPAN3-205ENST00000558745 PDIA6Q15084 440 aa18.01■□□□□ 0.47
TSPAN3-205ENST00000558745 CCDC27Q2M243 656 aa18.01■□□□□ 0.47
TSPAN3-205ENST00000558745 PROSER3Q2NL68 480 aa18.01■□□□□ 0.47
TSPAN3-205ENST00000558745 TBC1D9BQ66K14 1250 aa18.01■□□□□ 0.47
TSPAN3-205ENST00000558745 NPM2Q86SE8 214 aaKnown RBP18.01■□□□□ 0.47
TSPAN3-205ENST00000558745 CCER2I3L3R5 266 aa18■□□□□ 0.47
TSPAN3-205ENST00000558745 POLRMTO00411 1230 aaKnown RBP18■□□□□ 0.47
TSPAN3-205ENST00000558745 TTLL7Q6ZT98 887 aa18■□□□□ 0.47
TSPAN3-205ENST00000558745 TSR2Q969E8 191 aaKnown RBP18■□□□□ 0.47
TSPAN3-205ENST00000558745 CALD1Q05682 793 aaKnown RBP17.99■□□□□ 0.47
TSPAN3-205ENST00000558745 DUSP27Q5VZP5 1158 aa17.99■□□□□ 0.47
TSPAN3-205ENST00000558745 C8orf58Q8NAV2 365 aa17.99■□□□□ 0.47
TSPAN3-205ENST00000558745 HLFQ16534 295 aa17.98■□□□□ 0.47
TSPAN3-205ENST00000558745 SPINK5Q9NQ38 1064 aaPredicted RBP17.98■□□□□ 0.47
TSPAN3-205ENST00000558745 CD2APQ9Y5K6 639 aa17.98■□□□□ 0.47
TSPAN3-205ENST00000558745 SERPINB2P05120 415 aa17.98■□□□□ 0.47
TSPAN3-205ENST00000558745 PELP1Q8IZL8 1130 aaKnown RBP17.98■□□□□ 0.47
TSPAN3-205ENST00000558745 CCDC24Q8N4L8 307 aa17.98■□□□□ 0.47
TSPAN3-205ENST00000558745 LRP10Q7Z4F1 713 aa17.97■□□□□ 0.47
TSPAN3-205ENST00000558745 TSPYL6Q8N831 410 aa17.97■□□□□ 0.47
TSPAN3-205ENST00000558745 LAMB4A4D0S4 1761 aa17.96■□□□□ 0.47
TSPAN3-205ENST00000558745 A0A0G2JLW4 131 aa17.96■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms