RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 PSDA5PKW4 1024 aaPredicted RBP22.67■■□□□ 1.22
TPM1-214ENST00000558544 GIGYF1O75420 1035 aaPredicted RBP22.67■■□□□ 1.22
TPM1-214ENST00000558544 TEX13AQ9BXU3 409 aaPredicted RBP22.67■■□□□ 1.22
TPM1-214ENST00000558544 TFCP2L1Q9NZI6 479 aa22.66■■□□□ 1.22
TPM1-214ENST00000558544 USP16Q9Y5T5 823 aa22.66■■□□□ 1.22
TPM1-214ENST00000558544 FANCIQ9NVI1 1328 aa22.66■■□□□ 1.22
TPM1-214ENST00000558544 GNPATO15228 680 aa22.65■■□□□ 1.22
TPM1-214ENST00000558544 STARD3NLO95772 234 aa22.65■■□□□ 1.22
TPM1-214ENST00000558544 GOLGA2Q08379 1002 aa22.64■■□□□ 1.22
TPM1-214ENST00000558544 RC3H1Q5TC82 1133 aaKnown RBP22.64■■□□□ 1.22
TPM1-214ENST00000558544 AMIGO3Q86WK7 504 aa22.64■■□□□ 1.22
TPM1-214ENST00000558544 CCDC87Q9NVE4 849 aa22.64■■□□□ 1.22
TPM1-214ENST00000558544 INTS5Q6P9B9 1019 aaKnown RBP22.63■■□□□ 1.21
TPM1-214ENST00000558544 SMIM5Q71RC9 77 aa22.63■■□□□ 1.21
TPM1-214ENST00000558544 ZBTB1Q9Y2K1 713 aa22.63■■□□□ 1.21
TPM1-214ENST00000558544 PNPLA7Q6ZV29 1317 aa22.63■■□□□ 1.21
TPM1-214ENST00000558544 PHF14O94880 888 aa22.63■■□□□ 1.21
TPM1-214ENST00000558544 MYH16Q9H6N6 1097 aa22.63■■□□□ 1.21
TPM1-214ENST00000558544 A1BGP04217 495 aa22.61■■□□□ 1.21
TPM1-214ENST00000558544 CANXP27824 592 aaKnown RBP22.61■■□□□ 1.21
TPM1-214ENST00000558544 DUSP27Q5VZP5 1158 aa22.61■■□□□ 1.21
TPM1-214ENST00000558544 C8orf58Q8NAV2 365 aa22.61■■□□□ 1.21
TPM1-214ENST00000558544 CDCA7LQ96GN5 454 aa22.61■■□□□ 1.21
TPM1-214ENST00000558544 RTCBQ9Y3I0 505 aaKnown RBP22.61■■□□□ 1.21
TPM1-214ENST00000558544 E9PSI1 815 aa22.6■■□□□ 1.21
TPM1-214ENST00000558544 ELL2O00472 640 aaPredicted RBP22.6■■□□□ 1.21
TPM1-214ENST00000558544 RPS6KA4O75676 772 aa22.6■■□□□ 1.21
TPM1-214ENST00000558544 EIF2S2P20042 333 aaKnown RBP22.6■■□□□ 1.21
TPM1-214ENST00000558544 PIP4K2AP48426 406 aaPredicted RBP22.6■■□□□ 1.21
TPM1-214ENST00000558544 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.59■■□□□ 1.21
TPM1-214ENST00000558544 SSFA2P28290 1259 aa22.59■■□□□ 1.21
TPM1-214ENST00000558544 PDGFDQ9GZP0 370 aaPredicted RBP22.59■■□□□ 1.21
TPM1-214ENST00000558544 SOS1Q07889 1333 aaPredicted RBP22.58■■□□□ 1.21
TPM1-214ENST00000558544 ZBED9Q6R2W3 1325 aa22.58■■□□□ 1.21
TPM1-214ENST00000558544 HOXB7P09629 217 aa22.58■■□□□ 1.21
TPM1-214ENST00000558544 SLFN5Q08AF3 891 aa22.58■■□□□ 1.21
TPM1-214ENST00000558544 TSPYL6Q8N831 410 aa22.58■■□□□ 1.21
TPM1-214ENST00000558544 NECTIN2Q92692 538 aa22.58■■□□□ 1.21
TPM1-214ENST00000558544 COL15A1P39059 1388 aa22.57■■□□□ 1.2
TPM1-214ENST00000558544 EXOSC9Q06265 439 aaKnown RBP22.57■■□□□ 1.2
TPM1-214ENST00000558544 COL23A1Q86Y22 540 aaPredicted RBP22.57■■□□□ 1.2
TPM1-214ENST00000558544 ZNF330Q9Y3S2 320 aaPredicted RBP22.57■■□□□ 1.2
TPM1-214ENST00000558544 MSH5O43196 834 aa22.56■■□□□ 1.2
TPM1-214ENST00000558544 FLAD1Q8NFF5 587 aa22.56■■□□□ 1.2
TPM1-214ENST00000558544 BCORQ6W2J9 1755 aa22.56■■□□□ 1.2
TPM1-214ENST00000558544 SCN7AQ01118 1682 aa22.56■■□□□ 1.2
TPM1-214ENST00000558544 NBPF26B4DH59 902 aa22.55■■□□□ 1.2
TPM1-214ENST00000558544 TRAPPC3LQ5T215 181 aa22.55■■□□□ 1.2
TPM1-214ENST00000558544 HDGFL1Q5TGJ6 251 aa22.55■■□□□ 1.2
TPM1-214ENST00000558544 NBPF10Q6P3W6 841 aaKnown RBP22.55■■□□□ 1.2
TPM1-214ENST00000558544 NBPF15Q8N660 670 aa22.55■■□□□ 1.2
TPM1-214ENST00000558544 ADRA2BP18089 450 aa22.54■■□□□ 1.2
TPM1-214ENST00000558544 IL6STP40189 918 aaPredicted RBP22.54■■□□□ 1.2
TPM1-214ENST00000558544 TWISTNBQ3B726 338 aaPredicted RBP22.54■■□□□ 1.2
TPM1-214ENST00000558544 CACNA1FO60840 1977 aa22.54■■□□□ 1.2
TPM1-214ENST00000558544 EIF5P55010 431 aaKnown RBP22.53■■□□□ 1.2
TPM1-214ENST00000558544 ARHGEF1Q92888 912 aaKnown RBP22.53■■□□□ 1.2
TPM1-214ENST00000558544 ERBB4Q15303 1308 aa22.53■■□□□ 1.2
TPM1-214ENST00000558544 MYL6BP14649 208 aa22.52■■□□□ 1.2
TPM1-214ENST00000558544 YTHDC1Q96MU7 727 aaKnown RBP22.52■■□□□ 1.2
TPM1-214ENST00000558544 COL24A1Q17RW2 1714 aa22.52■■□□□ 1.2
TPM1-214ENST00000558544 ANXA1P04083 346 aa22.51■■□□□ 1.19
TPM1-214ENST00000558544 TRMT2AQ8IZ69 625 aaKnown RBP22.51■■□□□ 1.19
TPM1-214ENST00000558544 CHPF2Q9P2E5 772 aa22.51■■□□□ 1.19
TPM1-214ENST00000558544 RFC4P35249 363 aa22.5■■□□□ 1.19
TPM1-214ENST00000558544 PDIA6Q15084 440 aa22.5■■□□□ 1.19
TPM1-214ENST00000558544 PROSER3Q2NL68 480 aa22.5■■□□□ 1.19
TPM1-214ENST00000558544 ZBTB7AO95365 584 aa22.5■■□□□ 1.19
TPM1-214ENST00000558544 NPM2Q86SE8 214 aaKnown RBP22.5■■□□□ 1.19
TPM1-214ENST00000558544 ARXQ96QS3 562 aa22.49■■□□□ 1.19
TPM1-214ENST00000558544 SRP68Q9UHB9 627 aaKnown RBP22.49■■□□□ 1.19
TPM1-214ENST00000558544 NUP98P52948 1817 aa22.49■■□□□ 1.19
TPM1-214ENST00000558544 A0A087WZG4 1122 aa22.48■■□□□ 1.19
TPM1-214ENST00000558544 VAMP4O75379 141 aa22.48■■□□□ 1.19
TPM1-214ENST00000558544 CCDC30Q5VVM6 783 aa22.48■■□□□ 1.19
TPM1-214ENST00000558544 DDX21Q9NR30 783 aaKnown RBP eCLIP22.48■■□□□ 1.19
TPM1-214ENST00000558544 TBC1D2BQ9UPU7 963 aa22.48■■□□□ 1.19
TPM1-214ENST00000558544 USP42Q9H9J4 1324 aaKnown RBP22.48■■□□□ 1.19
TPM1-214ENST00000558544 TCERG1O14776 1098 aaKnown RBP22.47■■□□□ 1.19
TPM1-214ENST00000558544 MSL1Q68DK7 614 aa22.47■■□□□ 1.19
TPM1-214ENST00000558544 LRP10Q7Z4F1 713 aa22.47■■□□□ 1.19
TPM1-214ENST00000558544 SLC16A10Q8TF71 515 aa22.47■■□□□ 1.19
TPM1-214ENST00000558544 DBF4Q9UBU7 674 aaPredicted RBP22.47■■□□□ 1.19
TPM1-214ENST00000558544 ZPR1O75312 459 aa22.46■■□□□ 1.19
TPM1-214ENST00000558544 DZIP3Q86Y13 1208 aaKnown RBP22.46■■□□□ 1.19
TPM1-214ENST00000558544 MTFR1LQ9H019 292 aa22.46■■□□□ 1.19
TPM1-214ENST00000558544 NARFQ9UHQ1 456 aa22.46■■□□□ 1.19
TPM1-214ENST00000558544 USPL1Q5W0Q7 1092 aa22.45■■□□□ 1.18
TPM1-214ENST00000558544 CHMP4AQ9BY43 222 aa22.45■■□□□ 1.18
TPM1-214ENST00000558544 ATF5Q9Y2D1 282 aaPredicted RBP22.45■■□□□ 1.18
TPM1-214ENST00000558544 ANKRD36CQ5JPF3 1778 aa22.45■■□□□ 1.18
TPM1-214ENST00000558544 ARFGEF2Q9Y6D5 1785 aa22.45■■□□□ 1.18
TPM1-214ENST00000558544 GYS1P13807 737 aa22.44■■□□□ 1.18
TPM1-214ENST00000558544 TTLL7Q6ZT98 887 aa22.44■■□□□ 1.18
TPM1-214ENST00000558544 STK31Q9BXU1 1019 aa22.43■■□□□ 1.18
TPM1-214ENST00000558544 LRP5O75197 1615 aa22.42■■□□□ 1.18
TPM1-214ENST00000558544 CAMTA2O94983 1202 aa22.42■■□□□ 1.18
TPM1-214ENST00000558544 AIMP1Q12904 312 aaKnown RBP22.42■■□□□ 1.18
TPM1-214ENST00000558544 KIF6Q6ZMV9 814 aa22.42■■□□□ 1.18
TPM1-214ENST00000558544 XAGE3Q8WTP9 111 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms