RNA–Protein interactions for RNA: ENST00000557585.5

PRKCH-226, Transcript of protein kinase C eta, humanhuman

TSL 5

Gene PRKCH, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-226ENST00000557585 MIER1Q8N108 512 aa13.8□□□□□ -0.2
PRKCH-226ENST00000557585 C4BP0C0L5 1744 aa13.8□□□□□ -0.2
PRKCH-226ENST00000557585 SIPA1L3O60292 1781 aaPredicted RBP13.8□□□□□ -0.2
PRKCH-226ENST00000557585 TUBGCP6Q96RT7 1819 aa13.8□□□□□ -0.2
PRKCH-226ENST00000557585 TJP1Q07157 1748 aa13.79□□□□□ -0.2
PRKCH-226ENST00000557585 CASZ1Q86V15 1759 aa13.79□□□□□ -0.2
PRKCH-226ENST00000557585 GNPATO15228 680 aa13.79□□□□□ -0.2
PRKCH-226ENST00000557585 HTATSF1O43719 755 aaKnown RBP13.79□□□□□ -0.2
PRKCH-226ENST00000557585 NEFMP07197 916 aa13.79□□□□□ -0.2
PRKCH-226ENST00000557585 CRKLP46109 303 aaKnown RBP13.79□□□□□ -0.2
PRKCH-226ENST00000557585 PIP4K2AP48426 406 aaPredicted RBP13.79□□□□□ -0.2
PRKCH-226ENST00000557585 DIEXFQ68CQ4 756 aaKnown RBP13.79□□□□□ -0.2
PRKCH-226ENST00000557585 MSL1Q68DK7 614 aa13.79□□□□□ -0.2
PRKCH-226ENST00000557585 INTS5Q6P9B9 1019 aaKnown RBP13.79□□□□□ -0.2
PRKCH-226ENST00000557585 TAF1LQ8IZX4 1826 aa13.78□□□□□ -0.2
PRKCH-226ENST00000557585 TAF7Q15545 349 aaPredicted RBP13.78□□□□□ -0.2
PRKCH-226ENST00000557585 KRT24Q2M2I5 525 aa13.78□□□□□ -0.2
PRKCH-226ENST00000557585 AK7Q96M32 723 aa13.78□□□□□ -0.2
PRKCH-226ENST00000557585 PNNQ9H307 717 aaKnown RBP13.78□□□□□ -0.2
PRKCH-226ENST00000557585 SALL2Q9Y467 1007 aaPredicted RBP13.78□□□□□ -0.2
PRKCH-226ENST00000557585 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.77□□□□□ -0.21
PRKCH-226ENST00000557585 CYP19A1P11511 503 aaPredicted RBP13.77□□□□□ -0.21
PRKCH-226ENST00000557585 PTGER2P43116 358 aa13.77□□□□□ -0.21
PRKCH-226ENST00000557585 TTC5Q8N0Z6 440 aa13.77□□□□□ -0.21
PRKCH-226ENST00000557585 ZBTB1Q9Y2K1 713 aa13.77□□□□□ -0.21
PRKCH-226ENST00000557585 USP16Q9Y5T5 823 aa13.77□□□□□ -0.21
PRKCH-226ENST00000557585 HEG1Q9ULI3 1381 aa13.76□□□□□ -0.21
PRKCH-226ENST00000557585 CHADLQ6NUI6 762 aa13.76□□□□□ -0.21
PRKCH-226ENST00000557585 LAS1LQ9Y4W2 734 aaKnown RBP13.76□□□□□ -0.21
PRKCH-226ENST00000557585 CNTNAP4Q9C0A0 1308 aa13.75□□□□□ -0.21
PRKCH-226ENST00000557585 A1BGP04217 495 aa13.75□□□□□ -0.21
PRKCH-226ENST00000557585 SGIP1Q9BQI5 828 aa13.75□□□□□ -0.21
PRKCH-226ENST00000557585 SRP68Q9UHB9 627 aaKnown RBP13.75□□□□□ -0.21
PRKCH-226ENST00000557585 UBR2Q8IWV8 1755 aa13.75□□□□□ -0.21
PRKCH-226ENST00000557585 MYH14Q7Z406 1995 aaKnown RBP13.74□□□□□ -0.21
PRKCH-226ENST00000557585 COL5A3P25940 1745 aaPredicted RBP13.74□□□□□ -0.21
PRKCH-226ENST00000557585 CANXP27824 592 aaKnown RBP13.74□□□□□ -0.21
PRKCH-226ENST00000557585 EIF4A1P60842 406 aaKnown RBP13.74□□□□□ -0.21
PRKCH-226ENST00000557585 ARHGEF1Q92888 912 aaKnown RBP13.74□□□□□ -0.21
PRKCH-226ENST00000557585 FMNL2Q96PY5 1086 aa13.74□□□□□ -0.21
PRKCH-226ENST00000557585 CCDC87Q9NVE4 849 aa13.74□□□□□ -0.21
PRKCH-226ENST00000557585 RPS6KA4O75676 772 aa13.73□□□□□ -0.21
PRKCH-226ENST00000557585 RC3H1Q5TC82 1133 aaKnown RBP13.73□□□□□ -0.21
PRKCH-226ENST00000557585 SPON1Q9HCB6 807 aa13.73□□□□□ -0.21
PRKCH-226ENST00000557585 TSPYL4Q9UJ04 414 aa13.73□□□□□ -0.21
PRKCH-226ENST00000557585 UBR3Q6ZT12 1888 aa13.73□□□□□ -0.21
PRKCH-226ENST00000557585 CHL1O00533 1208 aa13.72□□□□□ -0.21
PRKCH-226ENST00000557585 VSIG10Q8N0Z9 540 aa13.72□□□□□ -0.21
PRKCH-226ENST00000557585 MTFR1LQ9H019 292 aa13.72□□□□□ -0.21
PRKCH-226ENST00000557585 RTCBQ9Y3I0 505 aaKnown RBP13.72□□□□□ -0.21
PRKCH-226ENST00000557585 ZNF831Q5JPB2 1677 aa13.72□□□□□ -0.21
PRKCH-226ENST00000557585 SOS1Q07889 1333 aaPredicted RBP13.71□□□□□ -0.21
PRKCH-226ENST00000557585 NBPF26B4DH59 902 aa13.71□□□□□ -0.21
PRKCH-226ENST00000557585 SSFA2P28290 1259 aa13.71□□□□□ -0.21
PRKCH-226ENST00000557585 NBPF10Q6P3W6 841 aaKnown RBP13.71□□□□□ -0.21
PRKCH-226ENST00000557585 NBPF15Q8N660 670 aa13.71□□□□□ -0.21
PRKCH-226ENST00000557585 SP7Q8TDD2 431 aaPredicted RBP13.71□□□□□ -0.21
PRKCH-226ENST00000557585 GIGYF1O75420 1035 aaPredicted RBP13.7□□□□□ -0.22
PRKCH-226ENST00000557585 SNRPA1P09661 255 aaKnown RBP13.7□□□□□ -0.22
PRKCH-226ENST00000557585 ZNF853P0CG23 659 aa13.7□□□□□ -0.22
PRKCH-226ENST00000557585 LMOD3Q0VAK6 560 aa13.7□□□□□ -0.22
PRKCH-226ENST00000557585 TRAPPC3LQ5T215 181 aa13.7□□□□□ -0.22
PRKCH-226ENST00000557585 WWC1Q8IX03 1113 aa13.7□□□□□ -0.22
PRKCH-226ENST00000557585 NECTIN2Q92692 538 aa13.7□□□□□ -0.22
PRKCH-226ENST00000557585 TSR2Q969E8 191 aaKnown RBP13.7□□□□□ -0.22
PRKCH-226ENST00000557585 MBIPQ9NS73 344 aa13.7□□□□□ -0.22
PRKCH-226ENST00000557585 ZNF330Q9Y3S2 320 aaPredicted RBP13.7□□□□□ -0.22
PRKCH-226ENST00000557585 CICQ96RK0 1608 aaPredicted RBP13.7□□□□□ -0.22
PRKCH-226ENST00000557585 KDM3BQ7LBC6 1761 aa13.7□□□□□ -0.22
PRKCH-226ENST00000557585 SRCAPQ6ZRS2 3230 aa13.69□□□□□ -0.22
PRKCH-226ENST00000557585 LRP5O75197 1615 aa13.69□□□□□ -0.22
PRKCH-226ENST00000557585 ANXA1P04083 346 aa13.69□□□□□ -0.22
PRKCH-226ENST00000557585 BCL2L12Q9HB09 334 aa13.69□□□□□ -0.22
PRKCH-226ENST00000557585 QSER1Q2KHR3 1735 aa13.68□□□□□ -0.22
PRKCH-226ENST00000557585 CCER2I3L3R5 266 aa13.68□□□□□ -0.22
PRKCH-226ENST00000557585 GYS1P13807 737 aa13.68□□□□□ -0.22
PRKCH-226ENST00000557585 EIF5P55010 431 aaKnown RBP13.68□□□□□ -0.22
PRKCH-226ENST00000557585 FKBP8Q14318 412 aa13.68□□□□□ -0.22
PRKCH-226ENST00000557585 PROSER3Q2NL68 480 aa13.68□□□□□ -0.22
PRKCH-226ENST00000557585 COL15A1P39059 1388 aa13.68□□□□□ -0.22
PRKCH-226ENST00000557585 STARD3NLO95772 234 aa13.67□□□□□ -0.22
PRKCH-226ENST00000557585 USPL1Q5W0Q7 1092 aa13.67□□□□□ -0.22
PRKCH-226ENST00000557585 CFAP44Q96MT7 982 aa13.67□□□□□ -0.22
PRKCH-226ENST00000557585 TBC1D2BQ9UPU7 963 aa13.67□□□□□ -0.22
PRKCH-226ENST00000557585 ELL2O00472 640 aaPredicted RBP13.66□□□□□ -0.22
PRKCH-226ENST00000557585 EIF2S2P20042 333 aaKnown RBP13.66□□□□□ -0.22
PRKCH-226ENST00000557585 RFC4P35249 363 aa13.66□□□□□ -0.22
PRKCH-226ENST00000557585 NGEFQ8N5V2 710 aa13.66□□□□□ -0.22
PRKCH-226ENST00000557585 TSPYL6Q8N831 410 aa13.66□□□□□ -0.22
PRKCH-226ENST00000557585 C8orf58Q8NAV2 365 aa13.66□□□□□ -0.22
PRKCH-226ENST00000557585 FLAD1Q8NFF5 587 aa13.66□□□□□ -0.22
PRKCH-226ENST00000557585 SLC16A10Q8TF71 515 aa13.66□□□□□ -0.22
PRKCH-226ENST00000557585 USP42Q9H9J4 1324 aaKnown RBP13.65□□□□□ -0.22
PRKCH-226ENST00000557585 C4AP0C0L4 1744 aa13.65□□□□□ -0.22
PRKCH-226ENST00000557585 PDIA6Q15084 440 aa13.65□□□□□ -0.22
PRKCH-226ENST00000557585 KLHL34Q8N239 644 aa13.65□□□□□ -0.22
PRKCH-226ENST00000557585 ARXQ96QS3 562 aa13.65□□□□□ -0.22
PRKCH-226ENST00000557585 FHDC1Q9C0D6 1143 aaPredicted RBP13.65□□□□□ -0.22
PRKCH-226ENST00000557585 MMP10P09238 476 aa13.64□□□□□ -0.23
PRKCH-226ENST00000557585 MYL6BP14649 208 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms