RNA–Protein interactions for RNA: ENST00000557442.5

HNRNPC-232, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 1,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-232ENST00000557442 RTCBQ9Y3I0 505 aaKnown RBP13.86□□□□□ -0.19
HNRNPC-232ENST00000557442 CYP19A1P11511 503 aaPredicted RBP13.85□□□□□ -0.19
HNRNPC-232ENST00000557442 MTFR1LQ9H019 292 aa13.85□□□□□ -0.19
HNRNPC-232ENST00000557442 SPON1Q9HCB6 807 aa13.85□□□□□ -0.19
HNRNPC-232ENST00000557442 LAS1LQ9Y4W2 734 aaKnown RBP13.85□□□□□ -0.19
HNRNPC-232ENST00000557442 STARD3NLO95772 234 aa13.84□□□□□ -0.19
HNRNPC-232ENST00000557442 SLC16A10Q8TF71 515 aa13.84□□□□□ -0.19
HNRNPC-232ENST00000557442 TEX13AQ9BXU3 409 aaPredicted RBP13.84□□□□□ -0.19
HNRNPC-232ENST00000557442 ATF5Q9Y2D1 282 aaPredicted RBP13.84□□□□□ -0.19
HNRNPC-232ENST00000557442 NUP98P52948 1817 aa13.83□□□□□ -0.2
HNRNPC-232ENST00000557442 AFDNP55196 1824 aaKnown RBP13.83□□□□□ -0.2
HNRNPC-232ENST00000557442 RPS6KA4O75676 772 aa13.83□□□□□ -0.2
HNRNPC-232ENST00000557442 SNRPA1P09661 255 aaKnown RBP13.83□□□□□ -0.2
HNRNPC-232ENST00000557442 CALD1Q05682 793 aaKnown RBP13.83□□□□□ -0.2
HNRNPC-232ENST00000557442 INTS5Q6P9B9 1019 aaKnown RBP13.83□□□□□ -0.2
HNRNPC-232ENST00000557442 MIER1Q8N108 512 aa13.83□□□□□ -0.2
HNRNPC-232ENST00000557442 ZBTB1Q9Y2K1 713 aa13.83□□□□□ -0.2
HNRNPC-232ENST00000557442 CACNA1FO60840 1977 aa13.82□□□□□ -0.2
HNRNPC-232ENST00000557442 COL15A1P39059 1388 aa13.82□□□□□ -0.2
HNRNPC-232ENST00000557442 PRAMEF22A3QJZ6 481 aa13.82□□□□□ -0.2
HNRNPC-232ENST00000557442 EIF4A1P60842 406 aaKnown RBP13.82□□□□□ -0.2
HNRNPC-232ENST00000557442 TRAPPC3LQ5T215 181 aa13.82□□□□□ -0.2
HNRNPC-232ENST00000557442 BABAM1Q9NWV8 329 aa13.82□□□□□ -0.2
HNRNPC-232ENST00000557442 SOS1Q07889 1333 aaPredicted RBP13.82□□□□□ -0.2
HNRNPC-232ENST00000557442 CANXP27824 592 aaKnown RBP13.81□□□□□ -0.2
HNRNPC-232ENST00000557442 MSL1Q68DK7 614 aa13.81□□□□□ -0.2
HNRNPC-232ENST00000557442 SALL2Q9Y467 1007 aaPredicted RBP13.81□□□□□ -0.2
HNRNPC-232ENST00000557442 ANKRD36CQ5JPF3 1778 aa13.8□□□□□ -0.2
HNRNPC-232ENST00000557442 KIF13BQ9NQT8 1826 aa13.8□□□□□ -0.2
HNRNPC-232ENST00000557442 CHL1O00533 1208 aa13.8□□□□□ -0.2
HNRNPC-232ENST00000557442 RFC4P35249 363 aa13.8□□□□□ -0.2
HNRNPC-232ENST00000557442 CCDC27Q2M243 656 aa13.8□□□□□ -0.2
HNRNPC-232ENST00000557442 ARHGEF1Q92888 912 aaKnown RBP13.8□□□□□ -0.2
HNRNPC-232ENST00000557442 CFAP44Q96MT7 982 aa13.8□□□□□ -0.2
HNRNPC-232ENST00000557442 PPP1R1BQ9UD71 204 aaPredicted RBP13.8□□□□□ -0.2
HNRNPC-232ENST00000557442 ZNF330Q9Y3S2 320 aaPredicted RBP13.8□□□□□ -0.2
HNRNPC-232ENST00000557442 USP16Q9Y5T5 823 aa13.8□□□□□ -0.2
HNRNPC-232ENST00000557442 GIGYF1O75420 1035 aaPredicted RBP13.79□□□□□ -0.2
HNRNPC-232ENST00000557442 PTGER2P43116 358 aa13.79□□□□□ -0.2
HNRNPC-232ENST00000557442 GNAI1P63096 354 aa13.79□□□□□ -0.2
HNRNPC-232ENST00000557442 WWC1Q8IX03 1113 aa13.79□□□□□ -0.2
HNRNPC-232ENST00000557442 IFT57Q9NWB7 429 aa13.79□□□□□ -0.2
HNRNPC-232ENST00000557442 A1BGP04217 495 aa13.78□□□□□ -0.2
HNRNPC-232ENST00000557442 POLD1P28340 1107 aa13.78□□□□□ -0.2
HNRNPC-232ENST00000557442 PIP4K2AP48426 406 aaPredicted RBP13.78□□□□□ -0.2
HNRNPC-232ENST00000557442 NCBP3Q53F19 620 aaKnown RBP13.78□□□□□ -0.2
HNRNPC-232ENST00000557442 RNF39Q9H2S5 420 aa13.78□□□□□ -0.2
HNRNPC-232ENST00000557442 MBIPQ9NS73 344 aa13.78□□□□□ -0.2
HNRNPC-232ENST00000557442 USP42Q9H9J4 1324 aaKnown RBP13.78□□□□□ -0.2
HNRNPC-232ENST00000557442 ZNF853P0CG23 659 aa13.77□□□□□ -0.21
HNRNPC-232ENST00000557442 IL6STP40189 918 aaPredicted RBP13.77□□□□□ -0.21
HNRNPC-232ENST00000557442 NPM2Q86SE8 214 aaKnown RBP13.77□□□□□ -0.21
HNRNPC-232ENST00000557442 SGIP1Q9BQI5 828 aa13.77□□□□□ -0.21
HNRNPC-232ENST00000557442 NRXN2Q9P2S2 1712 aa13.76□□□□□ -0.21
HNRNPC-232ENST00000557442 N4BP2Q86UW6 1770 aaPredicted RBP13.76□□□□□ -0.21
HNRNPC-232ENST00000557442 ARFGEF2Q9Y6D5 1785 aa13.76□□□□□ -0.21
HNRNPC-232ENST00000557442 ZPR1O75312 459 aa13.76□□□□□ -0.21
HNRNPC-232ENST00000557442 EIF5P55010 431 aaKnown RBP13.76□□□□□ -0.21
HNRNPC-232ENST00000557442 KRT24Q2M2I5 525 aa13.76□□□□□ -0.21
HNRNPC-232ENST00000557442 SRP68Q9UHB9 627 aaKnown RBP13.76□□□□□ -0.21
HNRNPC-232ENST00000557442 A0A087WZG4 1122 aa13.75□□□□□ -0.21
HNRNPC-232ENST00000557442 GYS1P13807 737 aa13.75□□□□□ -0.21
HNRNPC-232ENST00000557442 NGEFQ8N5V2 710 aa13.75□□□□□ -0.21
HNRNPC-232ENST00000557442 ARXQ96QS3 562 aa13.75□□□□□ -0.21
HNRNPC-232ENST00000557442 IL16Q14005 1332 aa13.75□□□□□ -0.21
HNRNPC-232ENST00000557442 NBPF26B4DH59 902 aa13.74□□□□□ -0.21
HNRNPC-232ENST00000557442 EIF2S2P20042 333 aaKnown RBP13.74□□□□□ -0.21
HNRNPC-232ENST00000557442 BRCA1P38398 1863 aaKnown RBP13.74□□□□□ -0.21
HNRNPC-232ENST00000557442 CACNA1SQ13698 1873 aa13.74□□□□□ -0.21
HNRNPC-232ENST00000557442 USPL1Q5W0Q7 1092 aa13.74□□□□□ -0.21
HNRNPC-232ENST00000557442 NBPF10Q6P3W6 841 aaKnown RBP13.74□□□□□ -0.21
HNRNPC-232ENST00000557442 NBPF15Q8N660 670 aa13.74□□□□□ -0.21
HNRNPC-232ENST00000557442 TSR2Q969E8 191 aaKnown RBP13.74□□□□□ -0.21
HNRNPC-232ENST00000557442 KIAA1551Q9HCM1 1747 aa13.74□□□□□ -0.21
HNRNPC-232ENST00000557442 NARFQ9UHQ1 456 aa13.74□□□□□ -0.21
HNRNPC-232ENST00000557442 ANKRD31Q8N7Z5 1873 aa13.73□□□□□ -0.21
HNRNPC-232ENST00000557442 ERBB4Q15303 1308 aa13.73□□□□□ -0.21
HNRNPC-232ENST00000557442 WDR63Q8IWG1 891 aa13.73□□□□□ -0.21
HNRNPC-232ENST00000557442 KLHL34Q8N239 644 aa13.73□□□□□ -0.21
HNRNPC-232ENST00000557442 NLGN1Q8N2Q7 840 aa13.73□□□□□ -0.21
HNRNPC-232ENST00000557442 NECTIN2Q92692 538 aa13.73□□□□□ -0.21
HNRNPC-232ENST00000557442 TBC1D2BQ9UPU7 963 aa13.73□□□□□ -0.21
HNRNPC-232ENST00000557442 DLEC1Q9Y238 1755 aa13.73□□□□□ -0.21
HNRNPC-232ENST00000557442 FANCIQ9NVI1 1328 aa13.72□□□□□ -0.21
HNRNPC-232ENST00000557442 MMP10P09238 476 aa13.72□□□□□ -0.21
HNRNPC-232ENST00000557442 HOXB7P09629 217 aa13.72□□□□□ -0.21
HNRNPC-232ENST00000557442 MYL6BP14649 208 aa13.72□□□□□ -0.21
HNRNPC-232ENST00000557442 FKBP8Q14318 412 aa13.72□□□□□ -0.21
HNRNPC-232ENST00000557442 DUSP27Q5VZP5 1158 aa13.72□□□□□ -0.21
HNRNPC-232ENST00000557442 DZIP3Q86Y13 1208 aaKnown RBP13.72□□□□□ -0.21
HNRNPC-232ENST00000557442 DCAF8L1A6NGE4 600 aa13.71□□□□□ -0.21
HNRNPC-232ENST00000557442 HDGFL1Q5TGJ6 251 aa13.71□□□□□ -0.21
HNRNPC-232ENST00000557442 FHDC1Q9C0D6 1143 aaPredicted RBP13.71□□□□□ -0.21
HNRNPC-232ENST00000557442 ZNF521Q96K83 1311 aa13.7□□□□□ -0.22
HNRNPC-232ENST00000557442 ELL2O00472 640 aaPredicted RBP13.7□□□□□ -0.22
HNRNPC-232ENST00000557442 GOLGB1Q14789 3259 aaKnown RBP13.7□□□□□ -0.22
HNRNPC-232ENST00000557442 CAMTA2O94983 1202 aa13.69□□□□□ -0.22
HNRNPC-232ENST00000557442 ANXA1P04083 346 aa13.69□□□□□ -0.22
HNRNPC-232ENST00000557442 PROSER3Q2NL68 480 aa13.69□□□□□ -0.22
HNRNPC-232ENST00000557442 C8orf58Q8NAV2 365 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms