RNA–Protein interactions for RNA: ENST00000557349.5

TVP23C-CDRT4-204, Transcript of TVP23C-CDRT4 readthrough, humanhuman

TSL 2

Gene TVP23C-CDRT4, Length 1,005 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-CDRT4-204ENST00000557349 RFC4P35249 363 aa21.94■■□□□ 1.1
TVP23C-CDRT4-204ENST00000557349 INTS5Q6P9B9 1019 aaKnown RBP21.94■■□□□ 1.1
TVP23C-CDRT4-204ENST00000557349 ZBTB1Q9Y2K1 713 aa21.94■■□□□ 1.1
TVP23C-CDRT4-204ENST00000557349 COL24A1Q17RW2 1714 aa21.94■■□□□ 1.1
TVP23C-CDRT4-204ENST00000557349 APAF1O14727 1248 aa21.93■■□□□ 1.1
TVP23C-CDRT4-204ENST00000557349 ARHGEF1Q92888 912 aaKnown RBP21.93■■□□□ 1.1
TVP23C-CDRT4-204ENST00000557349 ARXQ96QS3 562 aa21.93■■□□□ 1.1
TVP23C-CDRT4-204ENST00000557349 SNRPA1P09661 255 aaKnown RBP21.92■■□□□ 1.1
TVP23C-CDRT4-204ENST00000557349 TSPYL4Q9UJ04 414 aa21.92■■□□□ 1.1
TVP23C-CDRT4-204ENST00000557349 SOS1Q07889 1333 aaPredicted RBP21.91■■□□□ 1.1
TVP23C-CDRT4-204ENST00000557349 CANXP27824 592 aaKnown RBP21.91■■□□□ 1.1
TVP23C-CDRT4-204ENST00000557349 TRIM35Q9UPQ4 493 aa21.91■■□□□ 1.1
TVP23C-CDRT4-204ENST00000557349 COL15A1P39059 1388 aa21.9■■□□□ 1.1
TVP23C-CDRT4-204ENST00000557349 KLHL34Q8N239 644 aa21.9■■□□□ 1.1
TVP23C-CDRT4-204ENST00000557349 ZNF330Q9Y3S2 320 aaPredicted RBP21.89■■□□□ 1.09
TVP23C-CDRT4-204ENST00000557349 LAMB4A4D0S4 1761 aa21.89■■□□□ 1.09
TVP23C-CDRT4-204ENST00000557349 PRAMEF22A3QJZ6 481 aa21.88■■□□□ 1.09
TVP23C-CDRT4-204ENST00000557349 FHDC1Q9C0D6 1143 aaPredicted RBP21.88■■□□□ 1.09
TVP23C-CDRT4-204ENST00000557349 LAS1LQ9Y4W2 734 aaKnown RBP21.88■■□□□ 1.09
TVP23C-CDRT4-204ENST00000557349 USP42Q9H9J4 1324 aaKnown RBP21.87■■□□□ 1.09
TVP23C-CDRT4-204ENST00000557349 EIF4A1P60842 406 aaKnown RBP21.87■■□□□ 1.09
TVP23C-CDRT4-204ENST00000557349 NPM2Q86SE8 214 aaKnown RBP21.87■■□□□ 1.09
TVP23C-CDRT4-204ENST00000557349 FAM9BQ8IZU0 186 aa21.87■■□□□ 1.09
TVP23C-CDRT4-204ENST00000557349 USP16Q9Y5T5 823 aa21.87■■□□□ 1.09
TVP23C-CDRT4-204ENST00000557349 BABAM1Q9NWV8 329 aa21.86■■□□□ 1.09
TVP23C-CDRT4-204ENST00000557349 SRP68Q9UHB9 627 aaKnown RBP21.86■■□□□ 1.09
TVP23C-CDRT4-204ENST00000557349 ZPR1O75312 459 aa21.85■■□□□ 1.09
TVP23C-CDRT4-204ENST00000557349 A1BGP04217 495 aa21.85■■□□□ 1.09
TVP23C-CDRT4-204ENST00000557349 GYS1P13807 737 aa21.85■■□□□ 1.09
TVP23C-CDRT4-204ENST00000557349 NLGN1Q8N2Q7 840 aa21.85■■□□□ 1.09
TVP23C-CDRT4-204ENST00000557349 SENP3-EIF4A1A0A087X0R7 540 aa21.84■■□□□ 1.09
TVP23C-CDRT4-204ENST00000557349 CALD1Q05682 793 aaKnown RBP21.84■■□□□ 1.09
TVP23C-CDRT4-204ENST00000557349 A0A087WZG4 1122 aa21.83■■□□□ 1.09
TVP23C-CDRT4-204ENST00000557349 GIGYF1O75420 1035 aaPredicted RBP21.83■■□□□ 1.09
TVP23C-CDRT4-204ENST00000557349 MMP10P09238 476 aa21.83■■□□□ 1.09
TVP23C-CDRT4-204ENST00000557349 IL6STP40189 918 aaPredicted RBP21.83■■□□□ 1.09
TVP23C-CDRT4-204ENST00000557349 PIP4K2AP48426 406 aaPredicted RBP21.82■■□□□ 1.08
TVP23C-CDRT4-204ENST00000557349 EIF5P55010 431 aaKnown RBP21.82■■□□□ 1.08
TVP23C-CDRT4-204ENST00000557349 USPL1Q5W0Q7 1092 aa21.82■■□□□ 1.08
TVP23C-CDRT4-204ENST00000557349 SYT17Q9BSW7 474 aa21.82■■□□□ 1.08
TVP23C-CDRT4-204ENST00000557349 NARFQ9UHQ1 456 aa21.82■■□□□ 1.08
TVP23C-CDRT4-204ENST00000557349 CHL1O00533 1208 aa21.81■■□□□ 1.08
TVP23C-CDRT4-204ENST00000557349 SCN7AQ01118 1682 aa21.8■■□□□ 1.08
TVP23C-CDRT4-204ENST00000557349 FKBP8Q14318 412 aa21.8■■□□□ 1.08
TVP23C-CDRT4-204ENST00000557349 CFAP44Q96MT7 982 aa21.8■■□□□ 1.08
TVP23C-CDRT4-204ENST00000557349 DIEXFQ68CQ4 756 aaKnown RBP21.79■■□□□ 1.08
TVP23C-CDRT4-204ENST00000557349 GNAI1P63096 354 aa21.78■■□□□ 1.08
TVP23C-CDRT4-204ENST00000557349 IFT57Q9NWB7 429 aa21.78■■□□□ 1.08
TVP23C-CDRT4-204ENST00000557349 TBC1D2BQ9UPU7 963 aa21.78■■□□□ 1.08
TVP23C-CDRT4-204ENST00000557349 PARP3Q9Y6F1 533 aa21.78■■□□□ 1.08
TVP23C-CDRT4-204ENST00000557349 CCDC27Q2M243 656 aa21.77■■□□□ 1.08
TVP23C-CDRT4-204ENST00000557349 DZIP3Q86Y13 1208 aaKnown RBP21.77■■□□□ 1.08
TVP23C-CDRT4-204ENST00000557349 MBIPQ9NS73 344 aa21.77■■□□□ 1.08
TVP23C-CDRT4-204ENST00000557349 DCAF8L1A6NGE4 600 aa21.76■■□□□ 1.07
TVP23C-CDRT4-204ENST00000557349 NBPF26B4DH59 902 aa21.76■■□□□ 1.07
TVP23C-CDRT4-204ENST00000557349 NBPF10Q6P3W6 841 aaKnown RBP21.76■■□□□ 1.07
TVP23C-CDRT4-204ENST00000557349 NBPF15Q8N660 670 aa21.76■■□□□ 1.07
TVP23C-CDRT4-204ENST00000557349 SALL2Q9Y467 1007 aaPredicted RBP21.76■■□□□ 1.07
TVP23C-CDRT4-204ENST00000557349 BCORQ6W2J9 1755 aa21.75■■□□□ 1.07
TVP23C-CDRT4-204ENST00000557349 CCER2I3L3R5 266 aa21.75■■□□□ 1.07
TVP23C-CDRT4-204ENST00000557349 EIF2S2P20042 333 aaKnown RBP21.75■■□□□ 1.07
TVP23C-CDRT4-204ENST00000557349 WWC1Q8IX03 1113 aa21.75■■□□□ 1.07
TVP23C-CDRT4-204ENST00000557349 MYL6BP14649 208 aa21.74■■□□□ 1.07
TVP23C-CDRT4-204ENST00000557349 KRT24Q2M2I5 525 aa21.74■■□□□ 1.07
TVP23C-CDRT4-204ENST00000557349 NLGN2Q8NFZ4 835 aa21.74■■□□□ 1.07
TVP23C-CDRT4-204ENST00000557349 BCL2L12Q9HB09 334 aa21.74■■□□□ 1.07
TVP23C-CDRT4-204ENST00000557349 CD2APQ9Y5K6 639 aa21.74■■□□□ 1.07
TVP23C-CDRT4-204ENST00000557349 ERBB4Q15303 1308 aa21.74■■□□□ 1.07
TVP23C-CDRT4-204ENST00000557349 ZNF853P0CG23 659 aa21.73■■□□□ 1.07
TVP23C-CDRT4-204ENST00000557349 DDR1Q08345 913 aa21.73■■□□□ 1.07
TVP23C-CDRT4-204ENST00000557349 C10orf71Q711Q0 1435 aa21.72■■□□□ 1.07
TVP23C-CDRT4-204ENST00000557349 CAMTA2O94983 1202 aa21.72■■□□□ 1.07
TVP23C-CDRT4-204ENST00000557349 NFIXQ14938 502 aa21.72■■□□□ 1.07
TVP23C-CDRT4-204ENST00000557349 NCBP3Q53F19 620 aaKnown RBP21.72■■□□□ 1.07
TVP23C-CDRT4-204ENST00000557349 BICDL1Q6ZP65 573 aa21.72■■□□□ 1.07
TVP23C-CDRT4-204ENST00000557349 NGEFQ8N5V2 710 aa21.72■■□□□ 1.07
TVP23C-CDRT4-204ENST00000557349 NECTIN2Q92692 538 aa21.72■■□□□ 1.07
TVP23C-CDRT4-204ENST00000557349 ZNF652Q9Y2D9 606 aa21.71■■□□□ 1.07
TVP23C-CDRT4-204ENST00000557349 POLRMTO00411 1230 aaKnown RBP21.7■■□□□ 1.06
TVP23C-CDRT4-204ENST00000557349 HOXB7P09629 217 aa21.7■■□□□ 1.06
TVP23C-CDRT4-204ENST00000557349 HDGFL1Q5TGJ6 251 aa21.7■■□□□ 1.06
TVP23C-CDRT4-204ENST00000557349 TM4SF1P30408 202 aa21.69■■□□□ 1.06
TVP23C-CDRT4-204ENST00000557349 DUSP27Q5VZP5 1158 aa21.69■■□□□ 1.06
TVP23C-CDRT4-204ENST00000557349 TBC1D9BQ66K14 1250 aa21.69■■□□□ 1.06
TVP23C-CDRT4-204ENST00000557349 KIF6Q6ZMV9 814 aa21.69■■□□□ 1.06
TVP23C-CDRT4-204ENST00000557349 PELP1Q8IZL8 1130 aaKnown RBP21.69■■□□□ 1.06
TVP23C-CDRT4-204ENST00000557349 TSR2Q969E8 191 aaKnown RBP21.68■■□□□ 1.06
TVP23C-CDRT4-204ENST00000557349 IL16Q14005 1332 aa21.68■■□□□ 1.06
TVP23C-CDRT4-204ENST00000557349 CARMIL3Q8ND23 1372 aa21.68■■□□□ 1.06
TVP23C-CDRT4-204ENST00000557349 KIF13BQ9NQT8 1826 aa21.67■■□□□ 1.06
TVP23C-CDRT4-204ENST00000557349 ANXA1P04083 346 aa21.66■■□□□ 1.06
TVP23C-CDRT4-204ENST00000557349 SERPINB2P05120 415 aa21.66■■□□□ 1.06
TVP23C-CDRT4-204ENST00000557349 WDR63Q8IWG1 891 aa21.66■■□□□ 1.06
TVP23C-CDRT4-204ENST00000557349 ELL2O00472 640 aaPredicted RBP21.65■■□□□ 1.06
TVP23C-CDRT4-204ENST00000557349 NPHP1O15259 732 aa21.65■■□□□ 1.06
TVP23C-CDRT4-204ENST00000557349 PDIA6Q15084 440 aa21.65■■□□□ 1.06
TVP23C-CDRT4-204ENST00000557349 GPR162Q16538 588 aa21.65■■□□□ 1.06
TVP23C-CDRT4-204ENST00000557349 PROSER3Q2NL68 480 aa21.65■■□□□ 1.06
TVP23C-CDRT4-204ENST00000557349 CLEC4GQ6UXB4 293 aa21.65■■□□□ 1.06
TVP23C-CDRT4-204ENST00000557349 TTLL7Q6ZT98 887 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms