RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 TBC1D9Q6ZT07 1266 aa7.35□□□□□ -1.23
SRP54-212ENST00000556992 BTBD6Q96KE9 485 aa7.35□□□□□ -1.23
SRP54-212ENST00000556992 CRISPLD1Q9H336 500 aa7.35□□□□□ -1.23
SRP54-212ENST00000556992 SERTAD1Q9UHV2 236 aa7.35□□□□□ -1.23
SRP54-212ENST00000556992 USP3Q9Y6I4 520 aa7.35□□□□□ -1.23
SRP54-212ENST00000556992 MROH2BQ7Z745 1585 aa7.34□□□□□ -1.23
SRP54-212ENST00000556992 C1QTNF9BB2RNN3 333 aa7.34□□□□□ -1.23
SRP54-212ENST00000556992 SOCS7O14512 581 aa7.34□□□□□ -1.23
SRP54-212ENST00000556992 CHRNA4P43681 627 aa7.34□□□□□ -1.23
SRP54-212ENST00000556992 EIF4G2P78344 907 aaKnown RBP eCLIP7.34□□□□□ -1.23
SRP54-212ENST00000556992 KLF15Q9UIH9 416 aa7.34□□□□□ -1.23
SRP54-212ENST00000556992 BAZ1AQ9NRL2 1556 aaPredicted RBP7.33□□□□□ -1.24
SRP54-212ENST00000556992 CD163Q86VB7 1156 aa7.33□□□□□ -1.24
SRP54-212ENST00000556992 CC2D2AQ9P2K1 1620 aa7.32□□□□□ -1.24
SRP54-212ENST00000556992 APBB1O00213 710 aa7.32□□□□□ -1.24
SRP54-212ENST00000556992 INHAP05111 366 aa7.32□□□□□ -1.24
SRP54-212ENST00000556992 DGKGP49619 791 aa7.32□□□□□ -1.24
SRP54-212ENST00000556992 PCDHGC4Q9Y5F7 938 aa7.32□□□□□ -1.24
SRP54-212ENST00000556992 GNB5O14775 395 aa7.31□□□□□ -1.24
SRP54-212ENST00000556992 KHNYNO15037 678 aaKnown RBP7.31□□□□□ -1.24
SRP54-212ENST00000556992 ATXN7O15265 892 aaPredicted RBP7.31□□□□□ -1.24
SRP54-212ENST00000556992 MAPTP10636 758 aaKnown RBP7.31□□□□□ -1.24
SRP54-212ENST00000556992 ABL2P42684 1182 aa7.31□□□□□ -1.24
SRP54-212ENST00000556992 ARSJQ5FYB0 599 aaPredicted RBP7.31□□□□□ -1.24
SRP54-212ENST00000556992 CHSY3Q70JA7 882 aa7.31□□□□□ -1.24
SRP54-212ENST00000556992 FCHSD1Q86WN1 690 aa7.31□□□□□ -1.24
SRP54-212ENST00000556992 Q8N3U1 123 aa7.31□□□□□ -1.24
SRP54-212ENST00000556992 GDPD2Q9HCC8 539 aa7.31□□□□□ -1.24
SRP54-212ENST00000556992 PARP3Q9Y6F1 533 aa7.31□□□□□ -1.24
SRP54-212ENST00000556992 A0A1W2PNR3 127 aa7.3□□□□□ -1.24
SRP54-212ENST00000556992 ARAFP10398 606 aa7.3□□□□□ -1.24
SRP54-212ENST00000556992 SMTNP53814 917 aa7.3□□□□□ -1.24
SRP54-212ENST00000556992 PCBP4P57723 403 aaKnown RBP7.3□□□□□ -1.24
SRP54-212ENST00000556992 TMEM229AB2RXF0 380 aa7.29□□□□□ -1.24
SRP54-212ENST00000556992 PIK3CDO00329 1044 aa7.29□□□□□ -1.24
SRP54-212ENST00000556992 ITGB7P26010 798 aa7.29□□□□□ -1.24
SRP54-212ENST00000556992 TNP2Q05952 138 aa7.29□□□□□ -1.24
SRP54-212ENST00000556992 FIGNL1Q6PIW4 674 aa7.29□□□□□ -1.24
SRP54-212ENST00000556992 ZNF295-AS1Q8N0V1 137 aa7.29□□□□□ -1.24
SRP54-212ENST00000556992 PLPP7Q8NBV4 271 aa7.29□□□□□ -1.24
SRP54-212ENST00000556992 NIFKQ9BYG3 293 aaKnown RBP7.29□□□□□ -1.24
SRP54-212ENST00000556992 STRN4Q9NRL3 753 aa7.29□□□□□ -1.24
SRP54-212ENST00000556992 CHIC2Q9UKJ5 165 aa7.29□□□□□ -1.24
SRP54-212ENST00000556992 DOC2BQ14184 412 aa7.28□□□□□ -1.24
SRP54-212ENST00000556992 ALYREFQ86V81 257 aaKnown RBP7.27□□□□□ -1.25
SRP54-212ENST00000556992 NLRP8Q86W28 1048 aa7.27□□□□□ -1.25
SRP54-212ENST00000556992 TRIM11Q96F44 468 aa7.27□□□□□ -1.25
SRP54-212ENST00000556992 ZIC5Q96T25 663 aa7.27□□□□□ -1.25
SRP54-212ENST00000556992 CABP1Q9NZU7 370 aa7.27□□□□□ -1.25
SRP54-212ENST00000556992 IQSEC3Q9UPP2 1182 aaPredicted RBP7.27□□□□□ -1.25
SRP54-212ENST00000556992 ADH6P28332 368 aa7.26□□□□□ -1.25
SRP54-212ENST00000556992 TXLNAP40222 546 aa7.26□□□□□ -1.25
SRP54-212ENST00000556992 SIRT1Q96EB6 747 aa7.26□□□□□ -1.25
SRP54-212ENST00000556992 UNC13AQ9UPW8 1703 aa7.25□□□□□ -1.25
SRP54-212ENST00000556992 A6NJY4 79 aa7.25□□□□□ -1.25
SRP54-212ENST00000556992 NBPF1Q3BBV0 1214 aa7.25□□□□□ -1.25
SRP54-212ENST00000556992 TBCELQ5QJ74 424 aa7.25□□□□□ -1.25
SRP54-212ENST00000556992 SEMA6BQ9H3T3 888 aa7.25□□□□□ -1.25
SRP54-212ENST00000556992 GJA3Q9Y6H8 435 aa7.25□□□□□ -1.25
SRP54-212ENST00000556992 EIF4G1Q04637 1599 aaKnown RBP7.25□□□□□ -1.25
SRP54-212ENST00000556992 TATP17735 454 aaPredicted RBP7.24□□□□□ -1.25
SRP54-212ENST00000556992 BICDL1Q6ZP65 573 aa7.24□□□□□ -1.25
SRP54-212ENST00000556992 C1orf216Q8TAB5 229 aa7.24□□□□□ -1.25
SRP54-212ENST00000556992 PLVAPQ9BX97 442 aa7.24□□□□□ -1.25
SRP54-212ENST00000556992 PRM3Q9NNZ6 103 aa7.24□□□□□ -1.25
SRP54-212ENST00000556992 NOP53Q9NZM5 478 aaKnown RBP7.24□□□□□ -1.25
SRP54-212ENST00000556992 PRR12Q9ULL5 1215 aa7.24□□□□□ -1.25
SRP54-212ENST00000556992 FAM229AH3BQW9 127 aa7.23□□□□□ -1.25
SRP54-212ENST00000556992 SEMA3FQ13275 785 aa7.23□□□□□ -1.25
SRP54-212ENST00000556992 MTFR1Q15390 333 aa7.23□□□□□ -1.25
SRP54-212ENST00000556992 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.23□□□□□ -1.25
SRP54-212ENST00000556992 ZDHHC1Q8WTX9 485 aa7.23□□□□□ -1.25
SRP54-212ENST00000556992 PCDHGA11Q9Y5H2 935 aa7.23□□□□□ -1.25
SRP54-212ENST00000556992 FAM157BP0CG42 384 aa7.22□□□□□ -1.25
SRP54-212ENST00000556992 MAP7D1Q3KQU3 841 aa7.22□□□□□ -1.25
SRP54-212ENST00000556992 FAM182BQ5T319 152 aa7.22□□□□□ -1.25
SRP54-212ENST00000556992 SH3PXD2AQ5TCZ1 1133 aa7.22□□□□□ -1.25
SRP54-212ENST00000556992 ZNF468Q5VIY5 522 aaPredicted RBP7.22□□□□□ -1.25
SRP54-212ENST00000556992 LRRC69Q6ZNQ3 347 aa7.22□□□□□ -1.25
SRP54-212ENST00000556992 SLC4A9Q96Q91 983 aa7.22□□□□□ -1.25
SRP54-212ENST00000556992 ZDHHC3Q9NYG2 299 aa7.22□□□□□ -1.25
SRP54-212ENST00000556992 SMARCA4P51532 1647 aa7.22□□□□□ -1.25
SRP54-212ENST00000556992 CUX2O14529 1486 aa7.22□□□□□ -1.25
SRP54-212ENST00000556992 PIK3R2O00459 728 aa7.21□□□□□ -1.26
SRP54-212ENST00000556992 CDK2AP1O14519 115 aa7.21□□□□□ -1.26
SRP54-212ENST00000556992 C8orf86Q6ZUL3 223 aa7.21□□□□□ -1.26
SRP54-212ENST00000556992 RAB44Q7Z6P3 723 aaPredicted RBP7.21□□□□□ -1.26
SRP54-212ENST00000556992 DEPDC4Q8N2C3 294 aa7.21□□□□□ -1.26
SRP54-212ENST00000556992 MARK1Q9P0L2 795 aa7.21□□□□□ -1.26
SRP54-212ENST00000556992 EFSO43281 561 aa7.2□□□□□ -1.26
SRP54-212ENST00000556992 SKIP12755 728 aa7.2□□□□□ -1.26
SRP54-212ENST00000556992 PSME1Q06323 249 aa7.2□□□□□ -1.26
SRP54-212ENST00000556992 SYT9Q86SS6 491 aa7.2□□□□□ -1.26
SRP54-212ENST00000556992 KRTAP4-8Q9BYQ9 185 aa7.2□□□□□ -1.26
SRP54-212ENST00000556992 ZNF358Q9NW07 568 aa7.2□□□□□ -1.26
SRP54-212ENST00000556992 CCDC88BA6NC98 1476 aa7.19□□□□□ -1.26
SRP54-212ENST00000556992 ATAD2BQ9ULI0 1458 aa7.19□□□□□ -1.26
SRP54-212ENST00000556992 TOP2AP11388 1531 aaKnown RBP7.19□□□□□ -1.26
SRP54-212ENST00000556992 GTF2IP78347 998 aa7.19□□□□□ -1.26
SRP54-212ENST00000556992 SFSWAPQ12872 951 aaKnown RBP7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms