RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 STARD3NLO95772 234 aa30.09■■■□□ 2.41
TDP1-216ENST00000556867 SOS1Q07889 1333 aaPredicted RBP30.08■■■□□ 2.41
TDP1-216ENST00000556867 MRS2Q9HD23 443 aa30.07■■■□□ 2.4
TDP1-216ENST00000556867 ZBTB1Q9Y2K1 713 aa30.07■■■□□ 2.4
TDP1-216ENST00000556867 RFC4P35249 363 aa30.06■■■□□ 2.4
TDP1-216ENST00000556867 FHDC1Q9C0D6 1143 aaPredicted RBP30.06■■■□□ 2.4
TDP1-216ENST00000556867 MIS18AQ9NYP9 233 aa30.06■■■□□ 2.4
TDP1-216ENST00000556867 NEUROD2Q15784 382 aa30.05■■■□□ 2.4
TDP1-216ENST00000556867 SNRPA1P09661 255 aaKnown RBP30.04■■■□□ 2.4
TDP1-216ENST00000556867 TRIM35Q9UPQ4 493 aa30.04■■■□□ 2.4
TDP1-216ENST00000556867 LAMB4A4D0S4 1761 aa30.03■■■□□ 2.4
TDP1-216ENST00000556867 COL15A1P39059 1388 aa30.03■■■□□ 2.4
TDP1-216ENST00000556867 USP42Q9H9J4 1324 aaKnown RBP30.02■■■□□ 2.4
TDP1-216ENST00000556867 SYT17Q9BSW7 474 aa30.02■■■□□ 2.4
TDP1-216ENST00000556867 GYS1P13807 737 aa30.01■■■□□ 2.39
TDP1-216ENST00000556867 BABAM1Q9NWV8 329 aa30.01■■■□□ 2.39
TDP1-216ENST00000556867 APAF1O14727 1248 aa30■■■□□ 2.39
TDP1-216ENST00000556867 CANXP27824 592 aaKnown RBP30■■■□□ 2.39
TDP1-216ENST00000556867 NLGN1Q8N2Q7 840 aa30■■■□□ 2.39
TDP1-216ENST00000556867 PRAMEF22A3QJZ6 481 aa29.99■■■□□ 2.39
TDP1-216ENST00000556867 USP16Q9Y5T5 823 aa29.99■■■□□ 2.39
TDP1-216ENST00000556867 EIF5P55010 431 aaKnown RBP29.98■■■□□ 2.39
TDP1-216ENST00000556867 EIF4A1P60842 406 aaKnown RBP29.98■■■□□ 2.39
TDP1-216ENST00000556867 SRP68Q9UHB9 627 aaKnown RBP29.98■■■□□ 2.39
TDP1-216ENST00000556867 TSPYL4Q9UJ04 414 aa29.98■■■□□ 2.39
TDP1-216ENST00000556867 A1BGP04217 495 aa29.96■■■□□ 2.39
TDP1-216ENST00000556867 MMP10P09238 476 aa29.96■■■□□ 2.39
TDP1-216ENST00000556867 IL6STP40189 918 aaPredicted RBP29.96■■■□□ 2.39
TDP1-216ENST00000556867 NARFQ9UHQ1 456 aa29.95■■■□□ 2.39
TDP1-216ENST00000556867 ZPR1O75312 459 aa29.94■■■□□ 2.38
TDP1-216ENST00000556867 GIGYF1O75420 1035 aaPredicted RBP29.94■■■□□ 2.38
TDP1-216ENST00000556867 KLHL34Q8N239 644 aa29.94■■■□□ 2.38
TDP1-216ENST00000556867 A0A087WZG4 1122 aa29.93■■■□□ 2.38
TDP1-216ENST00000556867 SCN7AQ01118 1682 aa29.92■■■□□ 2.38
TDP1-216ENST00000556867 CHL1O00533 1208 aa29.92■■■□□ 2.38
TDP1-216ENST00000556867 FKBP8Q14318 412 aa29.92■■■□□ 2.38
TDP1-216ENST00000556867 USPL1Q5W0Q7 1092 aa29.92■■■□□ 2.38
TDP1-216ENST00000556867 CD2APQ9Y5K6 639 aa29.91■■■□□ 2.38
TDP1-216ENST00000556867 KIF13BQ9NQT8 1826 aa29.88■■■□□ 2.37
TDP1-216ENST00000556867 BCL2L12Q9HB09 334 aa29.88■■■□□ 2.37
TDP1-216ENST00000556867 ZNF330Q9Y3S2 320 aaPredicted RBP29.88■■■□□ 2.37
TDP1-216ENST00000556867 BCORQ6W2J9 1755 aa29.87■■■□□ 2.37
TDP1-216ENST00000556867 NBPF26B4DH59 902 aa29.87■■■□□ 2.37
TDP1-216ENST00000556867 PIP4K2AP48426 406 aaPredicted RBP29.87■■■□□ 2.37
TDP1-216ENST00000556867 NBPF10Q6P3W6 841 aaKnown RBP29.87■■■□□ 2.37
TDP1-216ENST00000556867 NBPF15Q8N660 670 aa29.87■■■□□ 2.37
TDP1-216ENST00000556867 NLGN2Q8NFZ4 835 aa29.87■■■□□ 2.37
TDP1-216ENST00000556867 CALD1Q05682 793 aaKnown RBP29.86■■■□□ 2.37
TDP1-216ENST00000556867 NPM2Q86SE8 214 aaKnown RBP29.86■■■□□ 2.37
TDP1-216ENST00000556867 CFAP44Q96MT7 982 aa29.86■■■□□ 2.37
TDP1-216ENST00000556867 PARP3Q9Y6F1 533 aa29.86■■■□□ 2.37
TDP1-216ENST00000556867 LAS1LQ9Y4W2 734 aaKnown RBP29.85■■■□□ 2.37
TDP1-216ENST00000556867 TM4SF1P30408 202 aa29.84■■■□□ 2.37
TDP1-216ENST00000556867 DDR1Q08345 913 aa29.84■■■□□ 2.37
TDP1-216ENST00000556867 CCDC27Q2M243 656 aa29.84■■■□□ 2.37
TDP1-216ENST00000556867 NCBP3Q53F19 620 aaKnown RBP29.84■■■□□ 2.37
TDP1-216ENST00000556867 TBC1D2BQ9UPU7 963 aa29.84■■■□□ 2.37
TDP1-216ENST00000556867 C10orf71Q711Q0 1435 aa29.84■■■□□ 2.37
TDP1-216ENST00000556867 ZNF853P0CG23 659 aa29.83■■■□□ 2.37
TDP1-216ENST00000556867 ERBB4Q15303 1308 aa29.82■■■□□ 2.36
TDP1-216ENST00000556867 DCAF8L1A6NGE4 600 aa29.82■■■□□ 2.36
TDP1-216ENST00000556867 DZIP3Q86Y13 1208 aaKnown RBP29.82■■■□□ 2.36
TDP1-216ENST00000556867 IFT57Q9NWB7 429 aa29.82■■■□□ 2.36
TDP1-216ENST00000556867 POLRMTO00411 1230 aaKnown RBP29.81■■■□□ 2.36
TDP1-216ENST00000556867 CAMTA2O94983 1202 aa29.81■■■□□ 2.36
TDP1-216ENST00000556867 NFIXQ14938 502 aa29.81■■■□□ 2.36
TDP1-216ENST00000556867 NRXN2Q9P2S2 1712 aa29.8■■■□□ 2.36
TDP1-216ENST00000556867 FAM9BQ8IZU0 186 aa29.8■■■□□ 2.36
TDP1-216ENST00000556867 AFDNP55196 1824 aaKnown RBP29.8■■■□□ 2.36
TDP1-216ENST00000556867 GNAI1P63096 354 aa29.79■■■□□ 2.36
TDP1-216ENST00000556867 MBIPQ9NS73 344 aa29.79■■■□□ 2.36
TDP1-216ENST00000556867 KIAA1551Q9HCM1 1747 aa29.79■■■□□ 2.36
TDP1-216ENST00000556867 KRT24Q2M2I5 525 aa29.77■■■□□ 2.36
TDP1-216ENST00000556867 WWC1Q8IX03 1113 aa29.77■■■□□ 2.36
TDP1-216ENST00000556867 RGL2O15211 777 aa29.76■■■□□ 2.35
TDP1-216ENST00000556867 SENP3-EIF4A1A0A087X0R7 540 aa29.75■■■□□ 2.35
TDP1-216ENST00000556867 HOXB7P09629 217 aa29.75■■■□□ 2.35
TDP1-216ENST00000556867 TBC1D9BQ66K14 1250 aa29.75■■■□□ 2.35
TDP1-216ENST00000556867 PXDNLA1KZ92 1463 aa29.74■■■□□ 2.35
TDP1-216ENST00000556867 EIF2S2P20042 333 aaKnown RBP29.74■■■□□ 2.35
TDP1-216ENST00000556867 CLEC4GQ6UXB4 293 aa29.74■■■□□ 2.35
TDP1-216ENST00000556867 CCER2I3L3R5 266 aa29.72■■■□□ 2.35
TDP1-216ENST00000556867 SERPINB2P05120 415 aa29.72■■■□□ 2.35
TDP1-216ENST00000556867 MYL6BP14649 208 aa29.72■■■□□ 2.35
TDP1-216ENST00000556867 TGFB2P61812 414 aa29.72■■■□□ 2.35
TDP1-216ENST00000556867 PDIA6Q15084 440 aa29.72■■■□□ 2.35
TDP1-216ENST00000556867 BICDL1Q6ZP65 573 aa29.72■■■□□ 2.35
TDP1-216ENST00000556867 ZNF652Q9Y2D9 606 aa29.72■■■□□ 2.35
TDP1-216ENST00000556867 N4BP2Q86UW6 1770 aaPredicted RBP29.72■■■□□ 2.35
TDP1-216ENST00000556867 LRP10Q7Z4F1 713 aa29.71■■■□□ 2.35
TDP1-216ENST00000556867 CARMIL3Q8ND23 1372 aa29.71■■■□□ 2.35
TDP1-216ENST00000556867 IL16Q14005 1332 aa29.71■■■□□ 2.35
TDP1-216ENST00000556867 GPR162Q16538 588 aa29.7■■■□□ 2.35
TDP1-216ENST00000556867 GOLGB1Q14789 3259 aaKnown RBP29.7■■■□□ 2.34
TDP1-216ENST00000556867 DUSP27Q5VZP5 1158 aa29.69■■■□□ 2.34
TDP1-216ENST00000556867 NGEFQ8N5V2 710 aa29.69■■■□□ 2.34
TDP1-216ENST00000556867 NUP98P52948 1817 aa29.68■■■□□ 2.34
TDP1-216ENST00000556867 MAP3K15Q6ZN16 1313 aa29.68■■■□□ 2.34
TDP1-216ENST00000556867 BRCA1P38398 1863 aaKnown RBP29.68■■■□□ 2.34
TDP1-216ENST00000556867 ERVV-1B6SEH8 477 aa29.67■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms